EHI_153190 | proteasome subunit alpha type 6, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_153190OTHER0.9996930.0002440.000062
No Results

  • Fasta :-

    >EHI_153190 MAGTGYDRQLTIFSPEGRLYQVEYALKATKCESLTTVGVCSDEAACIITQKKLPDRLVDP STVTHLHRISKHVGCCMSGIYADGKVIAQRSQYYASKFQLDYGYEMPVSLVAKKTADFAQ MLTQHAYMRPFGVSSMFIGWDEVSGPQLWRSDPAGSVAAFRGCAAGEKEQEAFNNLEKKK ITKELTVDQVVCQALDCLQTVTSSEFKATDIEIAIVTKDNKLFHLLSQQEIEHYLVLASE KD
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_153190.fa Sequence name : EHI_153190 Sequence length : 242 VALUES OF COMPUTED PARAMETERS Coef20 : 3.516 CoefTot : -0.516 ChDiff : -4 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.576 1.100 0.181 0.409 MesoH : -0.543 0.108 -0.397 0.157 MuHd_075 : 21.716 7.050 3.826 4.814 MuHd_095 : 18.461 10.115 3.547 4.743 MuHd_100 : 18.801 10.470 3.978 5.856 MuHd_105 : 16.130 8.699 3.570 5.782 Hmax_075 : 8.750 1.983 -0.001 2.975 Hmax_095 : 7.613 4.112 -0.374 3.439 Hmax_100 : 10.000 5.500 1.132 3.960 Hmax_105 : -0.117 1.750 -1.227 3.243 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9284 0.0716 DFMC : 0.9598 0.0402
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 242 EHI_153190 MAGTGYDRQLTIFSPEGRLYQVEYALKATKCESLTTVGVCSDEAACIITQKKLPDRLVDPSTVTHLHRISKHVGCCMSGI 80 YADGKVIAQRSQYYASKFQLDYGYEMPVSLVAKKTADFAQMLTQHAYMRPFGVSSMFIGWDEVSGPQLWRSDPAGSVAAF 160 RGCAAGEKEQEAFNNLEKKKITKELTVDQVVCQALDCLQTVTSSEFKATDIEIAIVTKDNKLFHLLSQQEIEHYLVLASE 240 KD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_153190 8 AGTGYDR|QL 0.072 . EHI_153190 18 IFSPEGR|LY 0.086 . EHI_153190 27 QVEYALK|AT 0.057 . EHI_153190 30 YALKATK|CE 0.058 . EHI_153190 51 ACIITQK|KL 0.063 . EHI_153190 52 CIITQKK|LP 0.082 . EHI_153190 56 QKKLPDR|LV 0.157 . EHI_153190 68 TVTHLHR|IS 0.110 . EHI_153190 71 HLHRISK|HV 0.310 . EHI_153190 85 GIYADGK|VI 0.062 . EHI_153190 90 GKVIAQR|SQ 0.118 . EHI_153190 97 SQYYASK|FQ 0.072 . EHI_153190 113 PVSLVAK|KT 0.079 . EHI_153190 114 VSLVAKK|TA 0.119 . EHI_153190 129 TQHAYMR|PF 0.118 . EHI_153190 150 SGPQLWR|SD 0.114 . EHI_153190 161 GSVAAFR|GC 0.146 . EHI_153190 168 GCAAGEK|EQ 0.061 . EHI_153190 178 AFNNLEK|KK 0.069 . EHI_153190 179 FNNLEKK|KI 0.149 . EHI_153190 180 NNLEKKK|IT 0.102 . EHI_153190 183 EKKKITK|EL 0.068 . EHI_153190 207 VTSSEFK|AT 0.081 . EHI_153190 218 EIAIVTK|DN 0.062 . EHI_153190 221 IVTKDNK|LF 0.053 . EHI_153190 241 LVLASEK|D- 0.068 . ____________________________^_________________

  • Fasta :-

    >EHI_153190 ATTAATTAATGGCTGGAACAGGATATGATCGTCAACTTACAATCTTCTCACCTGAAGGAA GATTGTATCAAGTTGAATATGCCTTAAAAGCAACTAAATGTGAAAGTTTAACAACAGTTG GTGTATGTAGTGATGAAGCTGCATGTATTATAACACAAAAGAAATTACCAGATAGATTAG TTGATCCATCAACAGTCACTCATCTTCATCGTATTTCAAAACATGTTGGTTGTTGTATGT CAGGAATATATGCGGATGGTAAAGTTATTGCTCAAAGGTCACAGTATTATGCAAGTAAGT TCCAATTAGATTATGGCTATGAAATGCCTGTGTCATTAGTAGCAAAGAAAACTGCTGACT TTGCTCAAATGTTAACACAACATGCATATATGAGACCTTTTGGTGTATCTTCAATGTTTA TTGGATGGGATGAAGTTTCAGGACCTCAACTTTGGAGAAGTGATCCAGCAGGTTCTGTTG CTGCTTTTAGAGGATGTGCAGCAGGAGAGAAAGAGCAAGAAGCATTTAATAACTTAGAAA AGAAAAAGATTACTAAAGAATTAACTGTTGACCAAGTTGTTTGTCAAGCATTGGATTGTT TGCAAACAGTTACATCATCAGAATTTAAAGCTACTGATATTGAGATTGCAATTGTAACTA AAGATAATAAACTTTTCCATTTACTTTCACAACAAGAAATTGAGCACTATCTTGTTCTTG CATCAGAGAAGGATTAATTAAGTATAACATCCCTTT
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  • Fasta :-

    MAGTGYDRQLTIFSPEGRLYQVEYALKATKCESLTTVGVCSDEAACIITQKKLPDRLVDP STVTHLHRISKHVGCCMSGIYADGKVIAQRSQYYASKFQLDYGYEMPVSLVAKKTADFAQ MLTQHAYMRPFGVSSMFIGWDEVSGPQLWRSDPAGSVAAFRGCAAGEKEQEAFNNLEKKK ITKELTVDQVVCQALDCLQTVTSSEFKATDIEIAIVTKDNKLFHLLSQQEIEHYLVLASE KD

  • title: active site
  • coordinates: L34,Q50,K52,H65,E167
No Results
No Results
No Results

EHI_153190      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India