EHI_155060 | chaperone clpB, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0016887      

  • Computed_GO_Functions:  ATP binding      ATPase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_155060OTHER0.9990750.0002790.000647
No Results

  • Fasta :-

    >EHI_155060 MFLGPSGVGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQ LTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLG SEIIMKGVETTRQVDEQVKEQVMEIVKKSFKPEFLNRMDDIIVFSPLSEKELKEIVKLQM GEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKTVVTEITKSIIGGV MKEKSKIKIGYEDGKIEVKITDN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_155060.fa Sequence name : EHI_155060 Sequence length : 263 VALUES OF COMPUTED PARAMETERS Coef20 : 3.532 CoefTot : -0.882 ChDiff : -4 ZoneTo : 11 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.547 1.159 -0.037 0.485 MesoH : -1.344 0.072 -0.547 0.103 MuHd_075 : 19.891 21.049 7.305 6.781 MuHd_095 : 12.677 8.836 2.865 2.996 MuHd_100 : 9.545 8.634 2.949 2.206 MuHd_105 : 8.822 7.711 3.238 1.511 Hmax_075 : 14.600 16.600 3.177 5.980 Hmax_095 : 13.738 11.463 1.458 4.445 Hmax_100 : 12.300 11.300 1.530 4.440 Hmax_105 : 14.583 12.833 2.311 5.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9078 0.0922 DFMC : 0.9455 0.0545
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 263 EHI_155060 MFLGPSGVGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEK 80 AHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMKGVETTRQVDEQVKEQVMEIVKKSFKPEFLNRMDD 160 IIVFSPLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKTVVTEITKSIIGGV 240 MKEKSKIKIGYEDGKIEVKITDN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_155060 10 GPSGVGK|TE 0.071 . EHI_155060 15 GKTELAK|AL 0.074 . EHI_155060 30 SEENIVR|ID 0.076 . EHI_155060 44 ESHSVSR|LI 0.117 . EHI_155060 66 QLTEAIR|RR 0.065 . EHI_155060 67 LTEAIRR|RP 0.087 . EHI_155060 68 TEAIRRR|PY 0.244 . EHI_155060 80 LFDEIEK|AH 0.057 . EHI_155060 97 QLLDEGR|LT 0.089 . EHI_155060 102 GRLTDGR|GR 0.081 . EHI_155060 104 LTDGRGR|TV 0.106 . EHI_155060 109 GRTVDFK|NT 0.069 . EHI_155060 126 GSEIIMK|GV 0.095 . EHI_155060 132 KGVETTR|QV 0.137 . EHI_155060 139 QVDEQVK|EQ 0.054 . EHI_155060 147 QVMEIVK|KS 0.056 . EHI_155060 148 VMEIVKK|SF 0.154 . EHI_155060 151 IVKKSFK|PE 0.060 . EHI_155060 157 KPEFLNR|MD 0.123 . EHI_155060 170 FSPLSEK|EL 0.059 . EHI_155060 173 LSEKELK|EI 0.069 . EHI_155060 177 ELKEIVK|LQ 0.059 . EHI_155060 185 QMGEVIK|VI 0.063 . EHI_155060 188 EVIKVIK|KR 0.061 . EHI_155060 189 VIKVIKK|RY 0.087 . EHI_155060 190 IKVIKKR|YP 0.342 . EHI_155060 208 AIEGIIK|AG 0.059 . EHI_155060 218 SIAYGAR|PM 0.093 . EHI_155060 221 YGARPMR|RY 0.220 . EHI_155060 222 GARPMRR|YI 0.306 . EHI_155060 226 MRRYIEK|TV 0.099 . EHI_155060 234 VVTEITK|SI 0.075 . EHI_155060 242 IIGGVMK|EK 0.073 . EHI_155060 244 GGVMKEK|SK 0.091 . EHI_155060 246 VMKEKSK|IK 0.068 . EHI_155060 248 KEKSKIK|IG 0.065 . EHI_155060 255 IGYEDGK|IE 0.063 . EHI_155060 259 DGKIEVK|IT 0.063 . ____________________________^_________________

  • Fasta :-

    >EHI_155060 ATGTTTTTAGGACCAAGTGGAGTAGGTAAAACAGAATTAGCAAAAGCATTAGCAGCTGAA TTGTTTGATTCAGAGGAAAATATAGTTAGAATAGATATGAGTGAATATATGGAAAGTCAT AGTGTATCAAGACTGATAGGAGCACCACCAGGATATGTTGGATATGAAGAAGGAGGACAA TTAACAGAAGCAATTCGTCGTAGACCATATAGTGTAATATTATTTGATGAAATTGAAAAA GCACATCCACAAGTATTTAATGTGTTATTACAATTATTGGATGAAGGAAGATTAACAGAT GGAAGAGGAAGAACAGTTGATTTTAAGAATACGGTTGTGATTATGACATCGAATTTAGGA AGTGAAATAATAATGAAAGGAGTAGAAACAACAAGACAAGTTGATGAACAAGTTAAAGAA CAAGTCATGGAAATAGTGAAGAAGTCGTTTAAACCAGAGTTTCTCAATCGAATGGATGAT ATTATAGTATTTTCACCACTTTCAGAGAAAGAATTGAAAGAAATAGTTAAATTACAAATG GGAGAAGTGATTAAAGTCATTAAAAAGAGATATCCAGGAAGTGAAGTTGAAATGACGGAA GCAGCAATAGAAGGAATCATTAAAGCAGGATATTCAATAGCATATGGAGCAAGACCAATG CGAAGATATATTGAAAAGACAGTAGTTACAGAAATAACAAAATCAATAATAGGAGGAGTG ATGAAAGAGAAGAGTAAAATTAAGATAGGATATGAAGATGGTAAGATTGAAGTTAAAATA ACTGATAACTAA
  • Download Fasta

  • Fasta :-

    MFLGPSGVGKTELAKALAAELFDSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQ LTEAIRRRPYSVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLG SEIIMKGVETTRQVDEQVKEQVMEIVKKSFKPEFLNRMDDIIVFSPLSEKELKEIVKLQM GEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIEKTVVTEITKSIIGGV MKEKSKIKIGYEDGKIEVKITDN

    No Results
  • title: ATP binding site
  • coordinates: P5,S6,G7,V8,G9,K10,T11,E12,D76,N118
No Results
No Results
IDSitePeptideScoreMethod
EHI_155060168 SFSPLSEKEL0.996unsp

EHI_155060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India