EHI_158320 | peptidase T, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_158320OTHER0.9998590.0000730.000068
No Results

  • Fasta :-

    >EHI_158320 MTDSYAVQKFLKYVTINSQSNESTHVTPSTQCQFDMQKQLQKDLKELNVHFTFDEKNCIL KAELPATNGSKKSIGFFAHIDTSPEASGEGVKPIIHQLPTEVTSDLALPSGTVISKDDIK KYGGDEIITSSGDTLLGADDKSGVAILMGTLNKIMKDNIPHPRIMVIFTPDEEIGESCDH VCIEDLHLDYAYSVDGDELGTYNDEGFNAFGAELTINGYEVHPGEAYNIMEDAGFILSQF YTSLPISKRPETTKEDEGYILCTEMSGSVIKAHARFIVRSFKINEMEFFIQLMKDQISFL KRRYTKSSFDLKFTEQYRNMKRYLPDTLLVDKLIEAMKLSGVEAKKQYMRGGADCSHLSE KGLPCINMFAGGMNFHSRREFVPVKAINKGVEVLGHLVQLF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_158320.fa Sequence name : EHI_158320 Sequence length : 401 VALUES OF COMPUTED PARAMETERS Coef20 : 4.005 CoefTot : -0.757 ChDiff : -14 ZoneTo : 21 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.371 0.929 -0.084 0.394 MesoH : -0.847 0.091 -0.449 0.205 MuHd_075 : 34.311 23.340 9.372 7.022 MuHd_095 : 24.620 18.404 7.625 4.964 MuHd_100 : 21.009 15.618 6.170 4.613 MuHd_105 : 21.019 16.688 6.660 4.871 Hmax_075 : 14.000 10.150 1.262 4.398 Hmax_095 : 15.100 15.300 2.557 4.890 Hmax_100 : 8.100 9.900 0.266 3.360 Hmax_105 : 8.100 9.900 0.266 3.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7066 0.2934 DFMC : 0.8137 0.1863
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 401 EHI_158320 MTDSYAVQKFLKYVTINSQSNESTHVTPSTQCQFDMQKQLQKDLKELNVHFTFDEKNCILKAELPATNGSKKSIGFFAHI 80 DTSPEASGEGVKPIIHQLPTEVTSDLALPSGTVISKDDIKKYGGDEIITSSGDTLLGADDKSGVAILMGTLNKIMKDNIP 160 HPRIMVIFTPDEEIGESCDHVCIEDLHLDYAYSVDGDELGTYNDEGFNAFGAELTINGYEVHPGEAYNIMEDAGFILSQF 240 YTSLPISKRPETTKEDEGYILCTEMSGSVIKAHARFIVRSFKINEMEFFIQLMKDQISFLKRRYTKSSFDLKFTEQYRNM 320 KRYLPDTLLVDKLIEAMKLSGVEAKKQYMRGGADCSHLSEKGLPCINMFAGGMNFHSRREFVPVKAINKGVEVLGHLVQL 400 F 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 . 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_158320 9 DSYAVQK|FL 0.072 . EHI_158320 12 AVQKFLK|YV 0.085 . EHI_158320 38 CQFDMQK|QL 0.065 . EHI_158320 42 MQKQLQK|DL 0.074 . EHI_158320 45 QLQKDLK|EL 0.069 . EHI_158320 56 HFTFDEK|NC 0.052 . EHI_158320 61 EKNCILK|AE 0.066 . EHI_158320 71 PATNGSK|KS 0.059 . EHI_158320 72 ATNGSKK|SI 0.221 . EHI_158320 92 ASGEGVK|PI 0.077 . EHI_158320 116 SGTVISK|DD 0.068 . EHI_158320 120 ISKDDIK|KY 0.069 . EHI_158320 121 SKDDIKK|YG 0.148 . EHI_158320 141 LLGADDK|SG 0.087 . EHI_158320 153 LMGTLNK|IM 0.064 . EHI_158320 156 TLNKIMK|DN 0.094 . EHI_158320 163 DNIPHPR|IM 0.089 . EHI_158320 248 TSLPISK|RP 0.060 . EHI_158320 249 SLPISKR|PE 0.212 . EHI_158320 254 KRPETTK|ED 0.072 . EHI_158320 271 MSGSVIK|AH 0.064 . EHI_158320 275 VIKAHAR|FI 0.120 . EHI_158320 279 HARFIVR|SF 0.147 . EHI_158320 282 FIVRSFK|IN 0.150 . EHI_158320 294 FFIQLMK|DQ 0.061 . EHI_158320 301 DQISFLK|RR 0.054 . EHI_158320 302 QISFLKR|RY 0.219 . EHI_158320 303 ISFLKRR|YT 0.199 . EHI_158320 306 LKRRYTK|SS 0.280 . EHI_158320 312 KSSFDLK|FT 0.114 . EHI_158320 318 KFTEQYR|NM 0.080 . EHI_158320 321 EQYRNMK|RY 0.086 . EHI_158320 322 QYRNMKR|YL 0.178 . EHI_158320 332 DTLLVDK|LI 0.062 . EHI_158320 338 KLIEAMK|LS 0.067 . EHI_158320 345 LSGVEAK|KQ 0.070 . EHI_158320 346 SGVEAKK|QY 0.112 . EHI_158320 350 AKKQYMR|GG 0.095 . EHI_158320 361 CSHLSEK|GL 0.072 . EHI_158320 378 GMNFHSR|RE 0.097 . EHI_158320 379 MNFHSRR|EF 0.168 . EHI_158320 385 REFVPVK|AI 0.076 . EHI_158320 389 PVKAINK|GV 0.081 . ____________________________^_________________

  • Fasta :-

    >EHI_158320 ATGACTGACTCTTATGCAGTTCAAAAATTTCTTAAATACGTCACCATAAATAGTCAAAGT AATGAATCAACTCATGTCACTCCTTCAACCCAATGTCAATTTGACATGCAAAAACAACTC CAAAAAGACTTAAAGGAATTAAATGTACATTTTACTTTTGATGAAAAAAATTGTATTTTA AAAGCTGAATTACCTGCAACAAATGGTTCTAAAAAATCAATTGGATTCTTTGCACATATT GACACTTCTCCAGAAGCCTCTGGAGAAGGTGTTAAACCAATAATTCATCAATTACCAACT GAAGTTACTTCTGATTTAGCTTTACCATCTGGAACAGTTATTAGTAAAGATGACATTAAA AAATATGGAGGAGATGAAATTATTACATCATCAGGAGATACATTATTAGGTGCTGATGAT AAATCAGGTGTTGCTATTTTAATGGGAACACTCAATAAAATTATGAAAGATAATATTCCA CATCCAAGAATAATGGTTATTTTTACACCTGATGAAGAAATAGGAGAGAGTTGTGATCAT GTTTGTATTGAAGACCTTCATCTTGACTATGCTTATTCTGTTGATGGAGATGAATTAGGA ACTTATAATGATGAAGGGTTTAATGCATTTGGAGCTGAATTAACTATTAATGGATATGAA GTTCATCCAGGAGAAGCTTATAATATAATGGAAGATGCTGGGTTTATTTTATCTCAATTC TATACTAGTTTACCAATTAGTAAACGACCTGAAACAACAAAAGAAGATGAAGGATATATT CTTTGTACTGAAATGAGTGGATCTGTAATAAAAGCACATGCCCGTTTCATAGTAAGATCA TTCAAAATTAATGAGATGGAATTCTTTATTCAGTTAATGAAAGATCAAATTTCCTTCTTA AAAAGAAGATATACAAAATCATCATTTGATTTAAAATTTACTGAGCAGTATCGTAATATG AAACGTTATCTTCCAGATACTCTTCTTGTTGATAAATTAATTGAAGCAATGAAATTATCT GGAGTTGAAGCAAAAAAACAGTATATGAGAGGTGGTGCTGATTGTTCACATTTAAGCGAA AAAGGACTTCCATGTATTAATATGTTTGCAGGAGGAATGAATTTCCATTCAAGAAGAGAA TTTGTTCCAGTAAAAGCAATCAACAAAGGAGTTGAAGTTCTTGGTCATTTAGTCCAGTTA TTCTAA
  • Download Fasta

  • Fasta :-

    MTDSYAVQKFLKYVTINSQSNESTHVTPSTQCQFDMQKQLQKDLKELNVHFTFDEKNCIL KAELPATNGSKKSIGFFAHIDTSPEASGEGVKPIIHQLPTEVTSDLALPSGTVISKDDIK KYGGDEIITSSGDTLLGADDKSGVAILMGTLNKIMKDNIPHPRIMVIFTPDEEIGESCDH VCIEDLHLDYAYSVDGDELGTYNDEGFNAFGAELTINGYEVHPGEAYNIMEDAGFILSQF YTSLPISKRPETTKEDEGYILCTEMSGSVIKAHARFIVRSFKINEMEFFIQLMKDQISFL KRRYTKSSFDLKFTEQYRNMKRYLPDTLLVDKLIEAMKLSGVEAKKQYMRGGADCSHLSE KGLPCINMFAGGMNFHSRREFVPVKAINKGVEVLGHLVQLF

  • title: metal binding site
  • coordinates: H79,D139,E172,E173,D195,H376
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_15832083 SHIDTSPEAS0.993unspEHI_158320252 TKRPETTKED0.993unsp

EHI_158320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India