EHI_160330 | cysteine protease, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_160330OTHER0.9983080.0003740.001318
No Results

  • Fasta :-

    >EHI_160330 MMREHNAKGSSYRMGINKFADMESNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQT LKQAVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHLSTIYAYLTKQVDNNKPK RKMLSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYR HECKSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYK SESCTGKITDHIVVVDGYGECDGHKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEY DDGSQLQNNLYVEMELGTGDTAEYNPKDGAGDDNKDPIGCVIVSPSGDPSNSPEDNKTTG VVMALFVFLMIFFI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_160330.fa Sequence name : EHI_160330 Sequence length : 374 VALUES OF COMPUTED PARAMETERS Coef20 : 3.836 CoefTot : -0.847 ChDiff : -18 ZoneTo : 20 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.718 2.600 0.447 0.905 MesoH : -0.985 -0.090 -0.469 0.152 MuHd_075 : 49.121 19.505 11.506 8.995 MuHd_095 : 9.414 8.352 2.677 4.494 MuHd_100 : 15.777 7.566 3.403 5.196 MuHd_105 : 16.949 7.657 3.504 4.807 Hmax_075 : 7.467 0.875 -0.516 2.840 Hmax_095 : -6.738 -0.700 -3.603 1.347 Hmax_100 : -1.300 0.400 -3.499 2.080 Hmax_105 : -0.263 0.000 -3.252 2.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9900 0.0100 DFMC : 0.9777 0.0223
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 374 EHI_160330 MMREHNAKGSSYRMGINKFADMESNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQTLKQAVPDNYTLCTSEAEYNY 80 CGTNNIDQNLCGGCYAIATAHHLSTIYAYLTKQVDNNKPKRKMLSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADD 160 YPFIDADKDCENVTDCAKYRHECKSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYK 240 SESCTGKITDHIVVVDGYGECDGHKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEYDDGSQLQNNLYVEMELGTGD 320 TAEYNPKDGAGDDNKDPIGCVIVSPSGDPSNSPEDNKTTGVVMALFVFLMIFFI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_160330 3 ----MMR|EH 0.096 . EHI_160330 8 MREHNAK|GS 0.083 . EHI_160330 13 AKGSSYR|MG 0.131 . EHI_160330 18 YRMGINK|FA 0.090 . EHI_160330 38 SIIQSNR|RM 0.118 . EHI_160330 39 IIQSNRR|MG 0.113 . EHI_160330 43 NRRMGAK|RI 0.087 . EHI_160330 44 RRMGAKR|IQ 0.310 . EHI_160330 50 RIQEMIR|ME 0.079 . EHI_160330 53 EMIRMEK|VY 0.124 . EHI_160330 58 EKVYSTK|QT 0.065 . EHI_160330 62 STKQTLK|QA 0.068 . EHI_160330 112 IYAYLTK|QV 0.076 . EHI_160330 118 KQVDNNK|PK 0.066 . EHI_160330 120 VDNNKPK|RK 0.069 . EHI_160330 121 DNNKPKR|KM 0.173 . EHI_160330 122 NNKPKRK|ML 0.156 . EHI_160330 168 PFIDADK|DC 0.069 . EHI_160330 178 NVTDCAK|YR 0.059 . EHI_160330 180 TDCAKYR|HE 0.130 . EHI_160330 184 KYRHECK|SL 0.092 . EHI_160330 193 EIDYPLK|FA 0.068 . EHI_160330 199 KFATSNK|FT 0.080 . EHI_160330 206 FTHFANK|NW 0.073 . EHI_160330 212 KNWEEIK|EI 0.073 . EHI_160330 217 IKEIIYK|YH 0.074 . EHI_160330 226 GFISAMK|VT 0.065 . EHI_160330 233 VTDSLLR|YV 0.141 . EHI_160330 240 YVGGIYK|SE 0.069 . EHI_160330 247 SESCTGK|IT 0.088 . EHI_160330 265 GECDGHK|FL 0.062 . EHI_160330 270 HKFLWVR|SS 0.137 . EHI_160330 285 VENGHFK|ID 0.070 . EHI_160330 327 TAEYNPK|DG 0.064 . EHI_160330 335 GAGDDNK|DP 0.067 . EHI_160330 357 NSPEDNK|TT 0.072 . ____________________________^_________________

  • Fasta :-

    >EHI_160330 ATGATGAGAGAGCACAATGCAAAAGGAAGTTCTTATAGAATGGGAATTAATAAATTTGCA GATATGGAAAGCAATGAACTTCTTGCAACATCAAGTATAATCCAAAGTAATAGAAGAATG GGTGCAAAAAGAATTCAAGAAATGATTCGAATGGAAAAAGTATATTCAACAAAACAAACT CTTAAACAAGCTGTTCCAGATAATTATACATTATGTACTTCTGAAGCTGAATATAATTAT TGTGGAACCAATAATATTGACCAAAATTTATGTGGTGGATGTTATGCAATTGCAACAGCA CATCATTTATCAACAATCTATGCCTATTTAACTAAACAAGTTGATAATAATAAACCAAAA CGAAAAATGTTATCTGCCCAACAATTGCTTGATTGTAATACCGAGTCATGGGGTGGATGT GGAGGAGGATTTGCTGAAGATGTTCTTGATTCTGTAGATGGAATTTATTATGCAGATGAT TATCCATTTATTGACGCTGATAAAGATTGTGAAAATGTTACAGATTGTGCAAAATATAGA CATGAATGTAAATCACTAGAAATCGATTATCCATTAAAATTTGCTACTAGTAATAAATTT ACTCACTTTGCCAATAAAAATTGGGAAGAAATAAAAGAAATTATTTATAAATATCATGGA TTTATTAGTGCAATGAAAGTTACTGATTCATTATTGAGATATGTAGGTGGTATTTATAAG TCTGAAAGTTGTACTGGAAAAATTACTGATCATATTGTTGTTGTTGATGGTTATGGAGAA TGTGATGGACATAAATTCCTTTGGGTAAGAAGCTCTTGGGGAAATGATTGGGGAGTTGAG AATGGACATTTCAAAATTGATTGGAACACTCTTTGTGGTATTAATGGCGTTGATGAATAT GACGATGGTTCTCAACTTCAAAATAATTTATATGTTGAAATGGAATTAGGAACTGGGGAT ACTGCTGAATATAATCCTAAAGATGGTGCTGGTGATGATAATAAAGATCCAATTGGATGC GTTATTGTTAGTCCATCTGGTGATCCATCCAATAGTCCTGAGGATAACAAAACAACAGGA GTTGTTATGGCTTTATTCGTCTTTTTAATGATTTTCTTCATCTAA
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  • Fasta :-

    MMREHNAKGSSYRMGINKFADMESNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQT LKQAVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHLSTIYAYLTKQVDNNKPK RKMLSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYR HECKSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYK SESCTGKITDHIVVVDGYGECDGHKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEY DDGSQLQNNLYVEMELGTGDTAEYNPKDGAGDDNKDPIGCVIVSPSGDPSNSPEDNKTTG VVMALFVFLMIFFI

  • title: active site
  • coordinates: Q88,C94,H251,S271
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_16033056 SEKVYSTKQT0.992unspEHI_160330352 SDPSNSPEDN0.998unsp

EHI_160330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India