EHI_160570 | 26S protease regulatory subunit 8, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_160570OTHER0.9999720.0000060.000021
No Results

  • Fasta :-

    >EHI_160570 MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIRAVGKDKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLP NQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTEL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_160570.fa Sequence name : EHI_160570 Sequence length : 211 VALUES OF COMPUTED PARAMETERS Coef20 : 3.364 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.394 0.824 -0.098 0.428 MesoH : -1.001 0.082 -0.503 0.165 MuHd_075 : 23.718 9.930 5.856 4.088 MuHd_095 : 22.597 8.339 6.260 4.323 MuHd_100 : 11.210 2.514 1.643 1.621 MuHd_105 : 12.770 8.619 4.480 1.959 Hmax_075 : -9.000 -0.800 -4.569 0.500 Hmax_095 : -6.600 -0.900 -4.015 1.260 Hmax_100 : -11.700 -4.200 -6.352 0.280 Hmax_105 : -7.000 -0.350 -3.915 0.502 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7538 0.2462 DFMC : 0.8135 0.1865
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 211 EHI_160570 MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIRAVGKDKVLVK 80 STQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLPNQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELP 160 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGTEL 240 ................................................................................ 80 ................................................................................ 160 ................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_160570 5 --MEIER|QS 0.087 . EHI_160570 14 EESAMVK|YY 0.084 . EHI_160570 17 AMVKYYK|HK 0.076 . EHI_160570 19 VKYYKHK|ID 0.069 . EHI_160570 35 TELQNQR|RL 0.080 . EHI_160570 36 ELQNQRR|LI 0.150 . EHI_160570 40 QRRLISK|RN 0.061 . EHI_160570 41 RRLISKR|NQ 0.145 . EHI_160570 49 QLNDQVR|RM 0.095 . EHI_160570 50 LNDQVRR|MK 0.159 . EHI_160570 52 DQVRRMK|EE 0.103 . EHI_160570 70 SVGEVIR|AV 0.149 . EHI_160570 74 VIRAVGK|DK 0.068 . EHI_160570 76 RAVGKDK|VL 0.065 . EHI_160570 80 KDKVLVK|ST 0.090 . EHI_160570 86 KSTQEGK|YV 0.100 . EHI_160570 90 EGKYVVK|VE 0.057 . EHI_160570 98 EAGIDIR|AL 0.087 . EHI_160570 101 IDIRALK|PN 0.105 . EHI_160570 105 ALKPNQR|VA 0.086 . EHI_160570 109 NQRVALK|SD 0.076 . EHI_160570 117 DTYSICK|VL 0.056 . EHI_160570 131 PLISLMR|VE 0.069 . EHI_160570 134 SLMRVEK|VP 0.128 . EHI_160570 151 GLDQQIK|EI 0.073 . EHI_160570 154 QQIKEIK|EV 0.072 . EHI_160570 162 VIELPIK|HP 0.058 . EHI_160570 176 LGIAQPK|GV 0.085 . EHI_160570 188 GPPGTGK|TL 0.059 . EHI_160570 193 GKTLLAR|AV 0.134 . EHI_160570 205 TDCTFIR|VS 0.135 . ____________________________^_________________

  • Fasta :-

    >EHI_160570 ATGGAAATAGAGAGACAAAGTGAAGAAAGTGCAATGGTCAAATATTATAAACACAAGATA GATGAAATGACATATGAGTATTGTACAGAGTTACAAAATCAACGACGATTAATTTCTAAA AGAAATCAATTAAATGACCAAGTAAGACGAATGAAAGAAGAACTTCAATTATTATCAGAA CCGTCATGTTCAGTTGGGGAAGTTATACGAGCTGTAGGAAAAGATAAGGTATTAGTTAAA TCAACACAAGAAGGAAAATATGTTGTTAAAGTCGAAGCAGGAATTGACATAAGAGCATTG AAACCCAACCAACGAGTAGCACTAAAAAGTGATACATATAGTATTTGTAAAGTTCTTCCA AATCAAGTAGATCCATTAATATCATTAATGAGAGTAGAAAAAGTACCAGATTCAACATAT GATATGATTGGAGGATTAGATCAACAAATTAAAGAGATAAAAGAAGTAATTGAATTACCA ATCAAACATCCTGAATTATTTGAATCACTTGGAATTGCACAACCCAAAGGTGTATTATTG TATGGACCACCAGGAACAGGCAAAACATTATTAGCAAGAGCTGTAGCACATCATACGGAT TGTACATTTATTCGAGTTTCAGGGACAGAATTA
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  • Fasta :-

    MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIRAVGKDKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLP NQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTEL

  • title: ATP binding site
  • coordinates: P183,P184,G185,T186,G187,K188,T189,L190
IDSitePositionGscoreIscore
EHI_160570T2090.5110.144
IDSitePositionGscoreIscore
EHI_160570T2090.5110.144
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_160570207 SFIRVSGTEL0.994unspEHI_160570207 SFIRVSGTEL0.994unspEHI_160570207 SFIRVSGTEL0.994unspEHI_1605707 SIERQSEESA0.995unspEHI_160570138 SKVPDSTYDM0.997unsp

EHI_160570      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India