EHI_166850 | proteasome subunit alpha type 4, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_166850OTHER0.9992480.0001130.000640
No Results

  • Fasta :-

    >EHI_166850 MFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSKGADKMYELDE HIACAAAGITSDTNILVDYLRDVCQQHRFTYGEEIPVEMLVQRICDMKQSYTQYGGLRPY GVSFLYAGWDRYFGYQLYMCDPSGNYGGWKATAIGANYQAAESIMKAEYKDDITLEEAKK LAVKIFSKSVESSSMVPSKLEFGIFKLDNQNKPSFKVMKDREVSVLLKECGIEQVEDRD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_166850.fa Sequence name : EHI_166850 Sequence length : 239 VALUES OF COMPUTED PARAMETERS Coef20 : 3.433 CoefTot : -0.141 ChDiff : -4 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.171 1.453 0.202 0.556 MesoH : -0.814 0.153 -0.429 0.128 MuHd_075 : 13.401 3.902 3.888 2.198 MuHd_095 : 14.433 9.708 4.868 1.683 MuHd_100 : 11.473 12.622 4.449 1.302 MuHd_105 : 15.721 18.572 4.414 4.253 Hmax_075 : 6.883 6.883 0.744 4.387 Hmax_095 : 5.950 7.500 -0.199 3.491 Hmax_100 : 6.900 11.200 -0.306 4.260 Hmax_105 : 3.850 10.500 -0.303 2.730 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9817 0.0183 DFMC : 0.9829 0.0171
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 239 EHI_166850 MFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSKGADKMYELDEHIACAAAGITSDTNILVDYL 80 RDVCQQHRFTYGEEIPVEMLVQRICDMKQSYTQYGGLRPYGVSFLYAGWDRYFGYQLYMCDPSGNYGGWKATAIGANYQA 160 AESIMKAEYKDDITLEEAKKLAVKIFSKSVESSSMVPSKLEFGIFKLDNQNKPSFKVMKDREVSVLLKECGIEQVEDRD 240 ................................................................................ 80 ................................................................................ 160 ............................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >EHI_166850 ATATGATAGTAGAACTACTATGTTCTCCCCTGAAGGGAGACTGTATCAAGTAGAATATGC AATGGAGGCTATTAGTCATTCATCAAGTGCAATTGGTATTTTAGCTACAGATGGAATTTT ACTTGCTGCTAAAAAGAAAAGAGTTGCACGATTAGTTGATAGGTCTAAAGGAGCAGATAA AATGTATGAATTAGATGAACATATTGCATGTGCTGCAGCAGGAATTACATCAGATACAAA TATATTAGTAGATTATTTAAGAGATGTATGTCAACAACATAGATTTACATATGGAGAAGA AATACCAGTAGAAATGTTAGTACAACGCATTTGTGATATGAAACAAAGTTATACTCAATA TGGTGGATTAAGACCATATGGAGTTTCGTTCTTATATGCAGGATGGGATAGATATTTTGG ATATCAATTATATATGTGTGATCCAAGTGGAAATTATGGAGGATGGAAAGCTACTGCTAT TGGAGCTAATTATCAAGCAGCTGAATCAATTATGAAAGCAGAATATAAAGATGATATTAC ATTAGAAGAAGCAAAAAAATTAGCAGTTAAAATCTTTAGTAAAAGTGTAGAAAGTTCATC AATGGTACCATCTAAATTAGAATTTGGTATTTTTAAATTAGATAATCAAAATAAACCAAG TTTTAAAGTTATGAAAGATCGTGAAGTTTCTGTTTTATTAAAAGAATGTGGAATTGAACA AGTAGAAGACAGAGATTAAATTATTCTCATCTAATAGCATTCAATTGACTAATTTTTA
  • Download Fasta

  • Fasta :-

    MFSPEGRLYQVEYAMEAISHSSSAIGILATDGILLAAKKKRVARLVDRSKGADKMYELDE HIACAAAGITSDTNILVDYLRDVCQQHRFTYGEEIPVEMLVQRICDMKQSYTQYGGLRPY GVSFLYAGWDRYFGYQLYMCDPSGNYGGWKATAIGANYQAAESIMKAEYKDDITLEEAKK LAVKIFSKSVESSSMVPSKLEFGIFKLDNQNKPSFKVMKDREVSVLLKECGIEQVEDRD

  • title: active site
  • coordinates: S22,K38,K40,K54,A156
No Results
No Results
IDSitePeptideScoreMethod
EHI_166850189 SIFSKSVESS0.993unsp

EHI_166850      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India