EHI_172140 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EHI_172140OTHER0.9982270.0001200.001654
No Results

  • Fasta :-

    >EHI_172140 MDPTFPINQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSSAINLKKDRFFI PEGSKISDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDG YLYFIVYRESVFGN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_172140.fa Sequence name : EHI_172140 Sequence length : 134 VALUES OF COMPUTED PARAMETERS Coef20 : 3.423 CoefTot : -1.551 ChDiff : -1 ZoneTo : 20 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.035 0.906 -0.188 0.376 MesoH : -1.221 -0.111 -0.553 0.115 MuHd_075 : 25.639 7.733 5.360 3.551 MuHd_095 : 7.832 8.159 2.692 2.391 MuHd_100 : 10.842 12.237 3.258 2.433 MuHd_105 : 9.249 12.988 3.451 1.917 Hmax_075 : 7.500 3.200 -0.902 2.540 Hmax_095 : -4.700 0.525 -1.983 1.453 Hmax_100 : 1.400 3.700 -1.862 2.390 Hmax_105 : 0.400 5.300 -2.725 2.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9946 0.0054 DFMC : 0.9920 0.0080
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 134 EHI_172140 MDPTFPINQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSSAINLKKDRFFIPEGSKISDFVKVLVDKYIET 80 DGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDGYLYFIVYRESVFGN 160 ................................................................................ 80 ...................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_172140 11 FPINQPK|LP 0.078 . EHI_172140 15 QPKLPFK|QR 0.063 . EHI_172140 17 KLPFKQR|VS 0.111 . EHI_172140 23 RVSFEER|KA 0.128 . EHI_172140 24 VSFEERK|AF 0.092 . EHI_172140 31 AFAIQLR|QK 0.084 . EHI_172140 33 AIQLRQK|KP 0.060 . EHI_172140 34 IQLRQKK|PN 0.198 . EHI_172140 54 SSAINLK|KD 0.062 . EHI_172140 55 SAINLKK|DR 0.134 . EHI_172140 57 INLKKDR|FF 0.115 . EHI_172140 65 FIPEGSK|IS 0.054 . EHI_172140 71 KISDFVK|VL 0.069 . EHI_172140 76 VKVLVDK|YI 0.081 . EHI_172140 92 ISTVSVK|IQ 0.065 . EHI_172140 98 KIQTPSK|AI 0.071 . EHI_172140 128 LYFIVYR|ES 0.076 . ____________________________^_________________

  • Fasta :-

    >EHI_172140 ATGGATCCAACTTTTCCAATAAACCAACCAAAACTTCCTTTTAAACAACGAGTTTCTTTT GAAGAACGTAAAGCATTTGCTATTCAATTAAGACAAAAGAAACCAAATTATGTTCCACTT GTTGTTGAAAGTGATGGAACTTCTAGTGCTATTAATTTAAAGAAAGATAGATTCTTTATT CCTGAAGGTTCAAAGATTAGTGACTTTGTTAAAGTTTTAGTTGATAAATACATTGAAACT GATGGTGAAACTCCAATTTCAACTGTTTCTGTTAAAATTCAAACACCAAGTAAAGCTATT CAACCATCAAATGAAGATACTATTGGTTCACTTTATGCTATGTATCAAGAAGAAGATGGG TATCTTTATTTCATTGTTTACAGAGAATCTGTCTTTGGAAATTAA
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  • Fasta :-

    MDPTFPINQPKLPFKQRVSFEERKAFAIQLRQKKPNYVPLVVESDGTSSAINLKKDRFFI PEGSKISDFVKVLVDKYIETDGETPISTVSVKIQTPSKAIQPSNEDTIGSLYAMYQEEDG YLYFIVYRESVFGN

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_172140T950.6390.054EHI_172140T40.5840.313EHI_172140T880.5640.083
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_172140T950.6390.054EHI_172140T40.5840.313EHI_172140T880.5640.083
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_17214019 SKQRVSFEER0.998unspEHI_172140103 SAIQPSNEDT0.996unsp

EHI_172140      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India