EHI_177160 | signal peptide peptidase family protein

_IDPredictionOTHERSPmTPCS_Position
EHI_177160OTHER0.9955400.0041260.000334
No Results

  • Fasta :-

    >EHI_177160 MDELLYLIVTLIVIHHVSSKTKLYYIKLNNNFISKMPMKYNNLFLIPFCGLMITLVIYYF PSLSEGLIFIIVYTLMSICLYLTIQPIVNSLPLHSFIMKKGVSITITLIIVLVYINNPNW WLTNIIAICIAISIQTLLSFDKVHIPLVLVIGLFVYDLIRIFRNCYIPFYDGQSVLKGLS KNSTAYRIPLYLEFYSMFSAGHFIIGLGDIIFPGMFITHLYCIDFLFKTHYFLISVIGYC FGMIGTILLIWNYQIGIPVLLCIVPAMIILSLIYSIITKTLKSVINLSLQKRFELLSQKL KECASTTEELTIQISQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_177160.fa Sequence name : EHI_177160 Sequence length : 316 VALUES OF COMPUTED PARAMETERS Coef20 : 4.008 CoefTot : 0.000 ChDiff : 7 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.300 2.841 0.587 0.895 MesoH : 1.425 1.655 0.208 0.682 MuHd_075 : 15.037 15.251 5.888 2.885 MuHd_095 : 14.779 12.690 3.033 3.323 MuHd_100 : 14.857 8.232 2.678 2.364 MuHd_105 : 21.954 15.406 5.902 3.761 Hmax_075 : 17.267 23.800 4.536 6.907 Hmax_095 : 15.225 21.087 2.341 6.510 Hmax_100 : 15.000 19.100 1.758 6.340 Hmax_105 : 18.600 21.500 3.828 6.560 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8595 0.1405 DFMC : 0.9524 0.0476
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 316 EHI_177160 MDELLYLIVTLIVIHHVSSKTKLYYIKLNNNFISKMPMKYNNLFLIPFCGLMITLVIYYFPSLSEGLIFIIVYTLMSICL 80 YLTIQPIVNSLPLHSFIMKKGVSITITLIIVLVYINNPNWWLTNIIAICIAISIQTLLSFDKVHIPLVLVIGLFVYDLIR 160 IFRNCYIPFYDGQSVLKGLSKNSTAYRIPLYLEFYSMFSAGHFIIGLGDIIFPGMFITHLYCIDFLFKTHYFLISVIGYC 240 FGMIGTILLIWNYQIGIPVLLCIVPAMIILSLIYSIITKTLKSVINLSLQKRFELLSQKLKECASTTEELTIQISQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_177160 20 IHHVSSK|TK 0.062 . EHI_177160 22 HVSSKTK|LY 0.081 . EHI_177160 27 TKLYYIK|LN 0.063 . EHI_177160 35 NNNFISK|MP 0.067 . EHI_177160 39 ISKMPMK|YN 0.072 . EHI_177160 99 LHSFIMK|KG 0.066 . EHI_177160 100 HSFIMKK|GV 0.205 . EHI_177160 142 TLLSFDK|VH 0.057 . EHI_177160 160 FVYDLIR|IF 0.067 . EHI_177160 163 DLIRIFR|NC 0.166 . EHI_177160 177 DGQSVLK|GL 0.070 . EHI_177160 181 VLKGLSK|NS 0.059 . EHI_177160 187 KNSTAYR|IP 0.094 . EHI_177160 228 CIDFLFK|TH 0.054 . EHI_177160 279 IYSIITK|TL 0.066 . EHI_177160 282 IITKTLK|SV 0.083 . EHI_177160 291 INLSLQK|RF 0.051 . EHI_177160 292 NLSLQKR|FE 0.177 . EHI_177160 299 FELLSQK|LK 0.058 . EHI_177160 301 LLSQKLK|EC 0.065 . ____________________________^_________________

  • Fasta :-

    >EHI_177160 ATGGACGAATTACTATATTTAATTGTCACACTTATAGTAATTCATCATGTATCATCAAAA ACCAAACTGTATTATATTAAGCTTAATAATAATTTTATTTCAAAAATGCCAATGAAGTAT AATAACTTATTCCTTATACCATTTTGTGGTTTAATGATTACGTTAGTAATATATTACTTT CCATCACTTTCTGAAGGTTTAATATTTATAATAGTTTACACGTTAATGTCAATTTGTTTA TATTTAACCATTCAACCAATAGTCAACAGTCTTCCATTACATTCTTTTATTATGAAAAAA GGTGTTTCAATTACAATAACCCTTATAATTGTTTTGGTTTATATTAATAATCCAAATTGG TGGTTAACAAATATTATTGCGATATGTATTGCTATTTCAATTCAAACATTATTATCTTTT GATAAAGTTCATATTCCATTAGTATTGGTAATAGGACTATTTGTCTATGATTTAATACGA ATTTTTAGAAATTGTTATATTCCATTTTATGATGGTCAATCAGTTTTAAAAGGATTATCA AAAAATTCTACTGCATATCGAATACCATTATACCTTGAATTTTATAGTATGTTTAGTGCA GGTCATTTTATTATTGGATTAGGTGATATTATTTTTCCAGGAATGTTCATTACACATTTA TACTGTATTGACTTCTTATTTAAAACTCATTACTTTCTAATTAGTGTAATTGGATATTGT TTTGGAATGATTGGAACAATATTATTGATATGGAATTATCAAATAGGCATACCTGTGTTA CTGTGCATAGTTCCAGCAATGATTATTCTATCACTTATTTATTCTATCATAACTAAAACA TTAAAGAGTGTAATTAATCTTTCATTGCAAAAGAGATTTGAATTATTATCTCAAAAATTA AAAGAATGTGCTAGTACAACAGAAGAACTAACTATTCAAATAAGTCAGTAA
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  • Fasta :-

    MDELLYLIVTLIVIHHVSSKTKLYYIKLNNNFISKMPMKYNNLFLIPFCGLMITLVIYYF PSLSEGLIFIIVYTLMSICLYLTIQPIVNSLPLHSFIMKKGVSITITLIIVLVYINNPNW WLTNIIAICIAISIQTLLSFDKVHIPLVLVIGLFVYDLIRIFRNCYIPFYDGQSVLKGLS KNSTAYRIPLYLEFYSMFSAGHFIIGLGDIIFPGMFITHLYCIDFLFKTHYFLISVIGYC FGMIGTILLIWNYQIGIPVLLCIVPAMIILSLIYSIITKTLKSVINLSLQKRFELLSQKL KECASTTEELTIQISQ

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EHI_177160      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India