EHI_185410 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_185410OTHER0.9999720.0000060.000021
No Results

  • Fasta :-

    >EHI_185410 MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIRAVGKDKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLP NQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFM DEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRP GRIDRKIEFPNPKEEARLDILKIHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGM FALRERRSHVTQEDFELAAAKVMKKDNNASISLQQLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_185410.fa Sequence name : EHI_185410 Sequence length : 398 VALUES OF COMPUTED PARAMETERS Coef20 : 3.364 CoefTot : 0.000 ChDiff : 3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.394 0.824 -0.054 0.428 MesoH : -0.744 0.197 -0.407 0.174 MuHd_075 : 23.718 9.930 5.856 4.088 MuHd_095 : 22.597 8.339 6.260 4.323 MuHd_100 : 11.210 2.514 1.643 1.621 MuHd_105 : 12.770 8.619 4.480 1.959 Hmax_075 : -9.000 -0.800 -4.569 0.500 Hmax_095 : -6.600 -0.900 -4.015 1.260 Hmax_100 : -11.700 -4.200 -6.352 0.280 Hmax_105 : -7.000 -0.350 -3.915 0.502 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7682 0.2318 DFMC : 0.8317 0.1683
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 398 EHI_185410 MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIRAVGKDKVLVK 80 STQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLPNQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELP 160 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFM 240 DEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDI 320 LKIHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKVMKKDNNASISLQQLWK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..............................................P............................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EHI_185410 5 --MEIER|QS 0.087 . EHI_185410 14 EESAMVK|YY 0.084 . EHI_185410 17 AMVKYYK|HK 0.076 . EHI_185410 19 VKYYKHK|ID 0.069 . EHI_185410 35 TELQNQR|RL 0.080 . EHI_185410 36 ELQNQRR|LI 0.150 . EHI_185410 40 QRRLISK|RN 0.061 . EHI_185410 41 RRLISKR|NQ 0.145 . EHI_185410 49 QLNDQVR|RM 0.095 . EHI_185410 50 LNDQVRR|MK 0.159 . EHI_185410 52 DQVRRMK|EE 0.103 . EHI_185410 70 SVGEVIR|AV 0.149 . EHI_185410 74 VIRAVGK|DK 0.068 . EHI_185410 76 RAVGKDK|VL 0.065 . EHI_185410 80 KDKVLVK|ST 0.090 . EHI_185410 86 KSTQEGK|YV 0.100 . EHI_185410 90 EGKYVVK|VE 0.057 . EHI_185410 98 EAGIDIR|AL 0.087 . EHI_185410 101 IDIRALK|PN 0.105 . EHI_185410 105 ALKPNQR|VA 0.086 . EHI_185410 109 NQRVALK|SD 0.076 . EHI_185410 117 DTYSICK|VL 0.056 . EHI_185410 131 PLISLMR|VE 0.069 . EHI_185410 134 SLMRVEK|VP 0.128 . EHI_185410 151 GLDQQIK|EI 0.073 . EHI_185410 154 QQIKEIK|EV 0.072 . EHI_185410 162 VIELPIK|HP 0.058 . EHI_185410 176 LGIAQPK|GV 0.085 . EHI_185410 188 GPPGTGK|TL 0.059 . EHI_185410 193 GKTLLAR|AV 0.134 . EHI_185410 205 TDCTFIR|VS 0.146 . EHI_185410 214 GTELVQK|YI 0.094 . EHI_185410 221 YIGEGSR|MV 0.115 . EHI_185410 224 EGSRMVR|EL 0.260 . EHI_185410 231 ELFVMAR|EH 0.090 . EHI_185410 250 DSIGSSR|IE 0.116 . EHI_185410 254 SSRIEGK|SG 0.160 . EHI_185410 263 GDSEVQR|TM 0.101 . EHI_185410 279 DGFEPTK|NI 0.063 . EHI_185410 282 EPTKNIK|VL 0.060 . EHI_185410 289 VLMATNR|ID 0.074 . EHI_185410 299 LDPALLR|PG 0.069 . EHI_185410 302 ALLRPGR|ID 0.229 . EHI_185410 305 RPGRIDR|KI 0.264 . EHI_185410 306 PGRIDRK|IE 0.075 . EHI_185410 313 IEFPNPK|EE 0.056 . EHI_185410 317 NPKEEAR|LD 0.096 . EHI_185410 322 ARLDILK|IH 0.067 . EHI_185410 326 ILKIHSK|KM 0.062 . EHI_185410 327 LKIHSKK|MN 0.099 . EHI_185410 332 KKMNLVR|GI 0.122 . EHI_185410 337 VRGIDLK|KI 0.070 . EHI_185410 338 RGIDLKK|IA 0.100 . EHI_185410 342 LKKIAER|LD 0.110 . EHI_185410 352 ASGAEIK|AC 0.074 . EHI_185410 364 AGMFALR|ER 0.079 . EHI_185410 366 MFALRER|RS 0.089 . EHI_185410 367 FALRERR|SH 0.616 *ProP* EHI_185410 381 FELAAAK|VM 0.058 . EHI_185410 384 AAAKVMK|KD 0.071 . EHI_185410 385 AAKVMKK|DN 0.132 . EHI_185410 398 SLQQLWK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >EHI_185410 ATGGAAATAGAGAGACAAAGTGAAGAAAGTGCAATGGTCAAATATTATAAACACAAGATA GATGAAATGACATATGAGTATTGTACAGAGTTACAAAATCAACGACGATTAATTTCTAAA AGAAATCAATTAAATGACCAAGTAAGACGAATGAAAGAAGAACTTCAATTATTATCAGAA CCGTCATGTTCAGTTGGGGAAGTTATACGAGCTGTAGGAAAAGATAAGGTATTAGTTAAA TCAACACAAGAAGGAAAATATGTTGTTAAAGTCGAAGCAGGAATTGACATAAGAGCATTG AAACCCAACCAACGAGTAGCACTAAAAAGTGATACATATAGTATTTGTAAAGTTCTTCCA AATCAAGTAGATCCATTAATATCATTAATGAGAGTAGAAAAAGTACCAGATTCAACATAT GATATGATTGGAGGATTAGATCAACAAATTAAAGAGATAAAAGAAGTAATTGAATTACCA ATCAAACATCCTGAATTATTTGAATCACTTGGAATTGCACAACCCAAAGGTGTATTATTG TATGGACCACCAGGAACAGGCAAAACATTATTAGCAAGAGCTGTAGCACATCATACGGAT TGTACATTTATTCGAGTTTCAGGGACAGAATTAGTACAAAAATATATTGGAGAAGGAAGT CGAATGGTTCGAGAGTTATTTGTAATGGCAAGAGAACATGCACCATCTATTATTTTCATG GATGAGATAGATTCTATTGGATCTAGTCGAATTGAAGGAAAGTCAGGAGGAGATAGTGAG GTTCAACGAACTATGTTAGAATTAGTTAATCAATTAGATGGATTTGAACCAACAAAAAAT ATCAAAGTGTTAATGGCAACAAATCGAATAGACATTTTAGACCCAGCATTATTAAGACCA GGACGAATTGACCGAAAAATCGAATTTCCTAATCCAAAAGAAGAAGCACGTTTAGACATT CTTAAGATTCATTCTAAGAAGATGAATTTAGTTCGTGGAATCGATCTTAAGAAAATTGCT GAACGATTGGATGGAGCATCTGGAGCGGAGATTAAAGCATGTTGTACCGAAGCAGGTATG TTTGCACTTCGGGAAAGAAGATCTCATGTAACACAAGAAGATTTTGAATTAGCTGCTGCT AAAGTAATGAAGAAAGATAATAACGCATCTATCTCATTACAACAATTATGGAAATAA
  • Download Fasta

  • Fasta :-

    MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIRAVGKDKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLP NQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYIGEGSRMVRELFVMAREHAPSIIFM DEIDSIGSSRIEGKSGGDSEVQRTMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRP GRIDRKIEFPNPKEEARLDILKIHSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGM FALRERRSHVTQEDFELAAAKVMKKDNNASISLQQLWK

  • title: ATP binding site
  • coordinates: P183,P184,G185,T186,G187,K188,T189,L190,D241,N288
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_185410207 SFIRVSGTEL0.996unspEHI_185410207 SFIRVSGTEL0.996unspEHI_185410207 SFIRVSGTEL0.996unspEHI_185410249 SSIGSSRIEG0.993unspEHI_185410255 SIEGKSGGDS0.998unspEHI_1854107 SIERQSEESA0.995unspEHI_185410138 SKVPDSTYDM0.997unsp

EHI_185410      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India