EHI_187200 | CAAX prenyl protease family

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
EHI_187200OTHER0.9989680.0010130.000019
No Results

  • Fasta :-

    >EHI_187200 MIVVGWFMSIIITLTLTVILLAFLGIASHRINDENKIAIIRMIIGIGYCVFVTIILDVPL NFNIPVLSTLFHLTQIVILFIGFIYCVYQQTDQIYCPNSLFIIRALVVAPIIEETLFRGV FIPYLLTNGCTSIFTFIYCSMLFGLAHINHLITEDVIDKAAIINTMIQVGFTTLFGMYSS YVFFSTKSVISCILCHAVANYLGFPDFTTMSDKKTAIIYIIGITLFIGSFFIHGILF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_187200.fa Sequence name : EHI_187200 Sequence length : 237 VALUES OF COMPUTED PARAMETERS Coef20 : 4.977 CoefTot : 0.378 ChDiff : -2 ZoneTo : 32 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.518 2.812 0.547 0.948 MesoH : 0.940 1.546 0.091 0.566 MuHd_075 : 15.210 8.900 3.823 3.326 MuHd_095 : 13.179 17.680 4.326 4.177 MuHd_100 : 11.958 13.151 3.854 3.060 MuHd_105 : 11.316 12.735 3.081 2.626 Hmax_075 : 15.283 23.600 3.787 8.110 Hmax_095 : 18.463 24.325 3.869 8.110 Hmax_100 : 18.000 19.800 3.451 8.220 Hmax_105 : 17.100 23.712 3.528 7.306 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8513 0.1487 DFMC : 0.8586 0.1414
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 237 EHI_187200 MIVVGWFMSIIITLTLTVILLAFLGIASHRINDENKIAIIRMIIGIGYCVFVTIILDVPLNFNIPVLSTLFHLTQIVILF 80 IGFIYCVYQQTDQIYCPNSLFIIRALVVAPIIEETLFRGVFIPYLLTNGCTSIFTFIYCSMLFGLAHINHLITEDVIDKA 160 AIINTMIQVGFTTLFGMYSSYVFFSTKSVISCILCHAVANYLGFPDFTTMSDKKTAIIYIIGITLFIGSFFIHGILF 240 ................................................................................ 80 ................................................................................ 160 ............................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_187200 30 LGIASHR|IN 0.093 . EHI_187200 36 RINDENK|IA 0.071 . EHI_187200 41 NKIAIIR|MI 0.104 . EHI_187200 104 NSLFIIR|AL 0.081 . EHI_187200 118 IEETLFR|GV 0.102 . EHI_187200 159 TEDVIDK|AA 0.067 . EHI_187200 187 YVFFSTK|SV 0.097 . EHI_187200 213 FTTMSDK|KT 0.061 . EHI_187200 214 TTMSDKK|TA 0.121 . ____________________________^_________________

  • Fasta :-

    >EHI_187200 ATGATAGTTGTTGGATGGTTTATGAGTATTATCATAACATTAACATTGACAGTCATTCTT CTTGCTTTTTTGGGTATAGCTTCACATAGAATAAATGACGAAAATAAAATAGCAATAATA AGAATGATCATTGGAATAGGATATTGTGTATTTGTCACTATTATTCTTGATGTCCCTCTT AACTTTAATATTCCTGTTTTATCAACGTTATTTCATCTAACCCAAATCGTCATTCTTTTT ATTGGATTTATATATTGTGTTTATCAACAAACTGATCAAATATATTGTCCTAATTCACTT TTCATCATACGGGCACTTGTTGTTGCACCAATAATTGAAGAAACATTATTTAGAGGAGTG TTTATACCATACCTGTTGACAAACGGATGCACATCAATATTTACATTTATCTATTGTTCA ATGCTTTTTGGACTTGCACACATCAACCACCTAATAACAGAAGATGTTATTGATAAAGCT GCTATCATCAATACAATGATACAAGTAGGATTTACTACATTATTTGGAATGTATTCGTCA TATGTTTTCTTCAGTACAAAATCTGTAATTTCATGCATTTTATGCCATGCAGTTGCAAAT TACTTAGGATTTCCTGATTTTACAACAATGTCAGATAAAAAAACTGCAATTATTTATATA ATTGGAATAACGTTATTTATTGGATCATTTTTCATTCATGGCATTCTCTTTTAA
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  • Fasta :-

    MIVVGWFMSIIITLTLTVILLAFLGIASHRINDENKIAIIRMIIGIGYCVFVTIILDVPL NFNIPVLSTLFHLTQIVILFIGFIYCVYQQTDQIYCPNSLFIIRALVVAPIIEETLFRGV FIPYLLTNGCTSIFTFIYCSMLFGLAHINHLITEDVIDKAAIINTMIQVGFTTLFGMYSS YVFFSTKSVISCILCHAVANYLGFPDFTTMSDKKTAIIYIIGITLFIGSFFIHGILF

    No Results
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EHI_187200      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India