EHI_187600 | 26S protease regulatory subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      GO:0016887      

  • Computed_GO_Functions:  ATP binding      ATPase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_187600OTHER0.9999720.0000060.000021
No Results

  • Fasta :-

    >EHI_187600 MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIRAVGKDKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLP NQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYMEKEIDSIGSSRMEGESGGDSEVQR TMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDILKI HSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKVM KKDNNASISLQQLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_187600.fa Sequence name : EHI_187600 Sequence length : 375 VALUES OF COMPUTED PARAMETERS Coef20 : 3.364 CoefTot : 0.000 ChDiff : 2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.394 0.824 -0.054 0.428 MesoH : -0.941 0.102 -0.486 0.170 MuHd_075 : 23.718 9.930 5.856 4.088 MuHd_095 : 22.597 8.339 6.260 4.323 MuHd_100 : 11.210 2.514 1.643 1.621 MuHd_105 : 12.770 8.619 4.480 1.959 Hmax_075 : -9.000 -0.800 -4.569 0.500 Hmax_095 : -6.600 -0.900 -4.015 1.260 Hmax_100 : -11.700 -4.200 -6.352 0.280 Hmax_105 : -7.000 -0.350 -3.915 0.502 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7370 0.2630 DFMC : 0.8167 0.1833
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 375 EHI_187600 MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSEPSCSVGEVIRAVGKDKVLVK 80 STQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLPNQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELP 160 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYMEKEIDSIGSSRMEGESGGDSEVQR 240 TMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDILKIHSKKMNLVRGIDLKKIAERL 320 DGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKVMKKDNNASISLQQLWK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......................P............................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EHI_187600 5 --MEIER|QS 0.087 . EHI_187600 14 EESAMVK|YY 0.084 . EHI_187600 17 AMVKYYK|HK 0.076 . EHI_187600 19 VKYYKHK|ID 0.069 . EHI_187600 35 TELQNQR|RL 0.080 . EHI_187600 36 ELQNQRR|LI 0.150 . EHI_187600 40 QRRLISK|RN 0.061 . EHI_187600 41 RRLISKR|NQ 0.145 . EHI_187600 49 QLNDQVR|RM 0.095 . EHI_187600 50 LNDQVRR|MK 0.159 . EHI_187600 52 DQVRRMK|EE 0.103 . EHI_187600 70 SVGEVIR|AV 0.149 . EHI_187600 74 VIRAVGK|DK 0.068 . EHI_187600 76 RAVGKDK|VL 0.065 . EHI_187600 80 KDKVLVK|ST 0.090 . EHI_187600 86 KSTQEGK|YV 0.100 . EHI_187600 90 EGKYVVK|VE 0.057 . EHI_187600 98 EAGIDIR|AL 0.087 . EHI_187600 101 IDIRALK|PN 0.105 . EHI_187600 105 ALKPNQR|VA 0.086 . EHI_187600 109 NQRVALK|SD 0.076 . EHI_187600 117 DTYSICK|VL 0.056 . EHI_187600 131 PLISLMR|VE 0.069 . EHI_187600 134 SLMRVEK|VP 0.128 . EHI_187600 151 GLDQQIK|EI 0.073 . EHI_187600 154 QQIKEIK|EV 0.072 . EHI_187600 162 VIELPIK|HP 0.058 . EHI_187600 176 LGIAQPK|GV 0.085 . EHI_187600 188 GPPGTGK|TL 0.059 . EHI_187600 193 GKTLLAR|AV 0.134 . EHI_187600 205 TDCTFIR|VS 0.146 . EHI_187600 214 GTELVQK|YM 0.081 . EHI_187600 218 VQKYMEK|EI 0.074 . EHI_187600 227 DSIGSSR|ME 0.117 . EHI_187600 240 GDSEVQR|TM 0.104 . EHI_187600 256 DGFEPTK|NI 0.063 . EHI_187600 259 EPTKNIK|VL 0.060 . EHI_187600 266 VLMATNR|ID 0.074 . EHI_187600 276 LDPALLR|PG 0.069 . EHI_187600 279 ALLRPGR|ID 0.229 . EHI_187600 282 RPGRIDR|KI 0.264 . EHI_187600 283 PGRIDRK|IE 0.075 . EHI_187600 290 IEFPNPK|EE 0.056 . EHI_187600 294 NPKEEAR|LD 0.096 . EHI_187600 299 ARLDILK|IH 0.067 . EHI_187600 303 ILKIHSK|KM 0.062 . EHI_187600 304 LKIHSKK|MN 0.099 . EHI_187600 309 KKMNLVR|GI 0.122 . EHI_187600 314 VRGIDLK|KI 0.070 . EHI_187600 315 RGIDLKK|IA 0.100 . EHI_187600 319 LKKIAER|LD 0.110 . EHI_187600 329 ASGAEIK|AC 0.074 . EHI_187600 341 AGMFALR|ER 0.079 . EHI_187600 343 MFALRER|RS 0.089 . EHI_187600 344 FALRERR|SH 0.616 *ProP* EHI_187600 358 FELAAAK|VM 0.058 . EHI_187600 361 AAAKVMK|KD 0.071 . EHI_187600 362 AAKVMKK|DN 0.132 . EHI_187600 375 SLQQLWK|-- 0.068 . ____________________________^_________________

  • Fasta :-

    >EHI_187600 ATGGAAATAGAGAGACAAAGTGAAGAAAGTGCAATGGTCAAATATTATAAACACAAGATA GATGAAATGACATATGAGTATTGTACAGAGTTACAAAATCAACGACGATTAATTTCTAAA AGAAATCAATTAAATGACCAAGTAAGACGAATGAAAGAAGAACTTCAATTATTATCAGAA CCGTCATGTTCAGTTGGGGAAGTTATACGAGCTGTAGGAAAAGATAAGGTATTAGTTAAA TCAACACAAGAAGGAAAATATGTTGTTAAAGTCGAAGCAGGAATTGACATAAGAGCATTG AAACCCAACCAACGAGTAGCACTAAAAAGTGATACATATAGTATTTGTAAAGTTCTTCCA AATCAAGTAGATCCATTAATATCATTAATGAGAGTAGAAAAAGTACCAGATTCAACATAT GATATGATTGGAGGATTAGATCAACAAATTAAAGAGATAAAAGAAGTAATTGAATTACCA ATCAAACATCCTGAATTATTTGAATCACTTGGAATTGCACAACCCAAAGGTGTATTATTG TATGGACCACCAGGAACAGGCAAAACATTATTAGCAAGAGCTGTAGCACATCATACGGAT TGTACATTTATTCGAGTTTCAGGGACAGAATTAGTACAAAAATATATGGAGAAGGAAATA GATTCTATTGGATCTAGTCGAATGGAAGGAGAGTCAGGAGGAGATAGTGAGGTTCAACGA ACTATGTTAGAATTAGTTAATCAATTAGATGGATTTGAACCAACAAAAAATATCAAAGTG TTAATGGCAACAAATCGAATAGACATTTTAGACCCAGCATTATTAAGACCAGGACGAATT GACCGAAAAATCGAATTTCCTAATCCAAAAGAAGAAGCACGTTTAGACATTCTTAAGATT CATTCTAAGAAGATGAATTTAGTTCGTGGAATCGATCTTAAGAAAATTGCTGAACGATTG GATGGAGCATCTGGAGCGGAGATTAAAGCATGTTGTACCGAAGCAGGTATGTTTGCACTT CGGGAAAGAAGATCTCATGTAACACAAGAAGATTTTGAATTAGCTGCTGCTAAAGTAATG AAGAAAGATAATAACGCATCTATCTCATTACAACAATTATGGAAATAA
  • Download Fasta

  • Fasta :-

    MEIERQSEESAMVKYYKHKIDEMTYEYCTELQNQRRLISKRNQLNDQVRRMKEELQLLSE PSCSVGEVIRAVGKDKVLVKSTQEGKYVVKVEAGIDIRALKPNQRVALKSDTYSICKVLP NQVDPLISLMRVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL YGPPGTGKTLLARAVAHHTDCTFIRVSGTELVQKYMEKEIDSIGSSRMEGESGGDSEVQR TMLELVNQLDGFEPTKNIKVLMATNRIDILDPALLRPGRIDRKIEFPNPKEEARLDILKI HSKKMNLVRGIDLKKIAERLDGASGAEIKACCTEAGMFALRERRSHVTQEDFELAAAKVM KKDNNASISLQQLWK

  • title: ATP binding site
  • coordinates: P183,P184,G185,T186,G187,K188,T189,L190,D221,N265
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_187600207 SFIRVSGTEL0.996unspEHI_187600207 SFIRVSGTEL0.996unspEHI_187600207 SFIRVSGTEL0.996unspEHI_187600226 SSIGSSRMEG0.991unspEHI_187600232 SMEGESGGDS0.997unspEHI_1876007 SIERQSEESA0.995unspEHI_187600138 SKVPDSTYDM0.997unsp

EHI_187600      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India