EHI_194060 | CAAX amino terminal protease family

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_194060OTHER0.9969300.0027440.000326
No Results

  • Fasta :-

    >EHI_194060 MKGFGLQVYFFQTVICSLVVINFMYYRYSMSGNVITLNTFIQEIFTLKGKWISTLIKAGM GFLSIFCLRVILYYCHIDTSNLFSNFYTDGELDIPVVLDNLFFSVITEEIALRRSMLNTI KTYTPTSKNYLFIISGIWFGLIHFVNIGTSSFTVTYVLFQMSYGMVIGYTFGIFTEYLGI FPSIILHSMNNACAIFIPFVFSPFLLLYSILSALLLIYLSHKLLISLSL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_194060.fa Sequence name : EHI_194060 Sequence length : 229 VALUES OF COMPUTED PARAMETERS Coef20 : 4.147 CoefTot : -2.286 ChDiff : 2 ZoneTo : 77 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.235 2.294 0.422 0.861 MesoH : 1.487 1.440 0.152 0.624 MuHd_075 : 36.094 26.490 10.945 8.670 MuHd_095 : 26.411 27.848 8.571 8.713 MuHd_100 : 28.283 26.075 8.991 8.290 MuHd_105 : 28.423 24.193 9.203 8.756 Hmax_075 : 20.300 25.433 3.594 7.747 Hmax_095 : 18.988 20.563 2.069 6.650 Hmax_100 : 10.500 20.700 1.938 6.400 Hmax_105 : 19.000 19.800 3.846 7.618 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1669 0.8331 DFMC : 0.2478 0.7522 This protein is probably imported in mitochondria. f(Ser) = 0.0649 f(Arg) = 0.0260 CMi = 0.61050 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 229 EHI_194060 MKGFGLQVYFFQTVICSLVVINFMYYRYSMSGNVITLNTFIQEIFTLKGKWISTLIKAGMGFLSIFCLRVILYYCHIDTS 80 NLFSNFYTDGELDIPVVLDNLFFSVITEEIALRRSMLNTIKTYTPTSKNYLFIISGIWFGLIHFVNIGTSSFTVTYVLFQ 160 MSYGMVIGYTFGIFTEYLGIFPSIILHSMNNACAIFIPFVFSPFLLLYSILSALLLIYLSHKLLISLSL 240 ................................................................................ 80 ................................................................................ 160 ..................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_194060 2 -----MK|GF 0.078 . EHI_194060 27 INFMYYR|YS 0.102 . EHI_194060 48 QEIFTLK|GK 0.061 . EHI_194060 50 IFTLKGK|WI 0.072 . EHI_194060 57 WISTLIK|AG 0.070 . EHI_194060 69 LSIFCLR|VI 0.076 . EHI_194060 113 TEEIALR|RS 0.066 . EHI_194060 114 EEIALRR|SM 0.154 . EHI_194060 121 SMLNTIK|TY 0.058 . EHI_194060 128 TYTPTSK|NY 0.065 . EHI_194060 222 LIYLSHK|LL 0.059 . ____________________________^_________________

  • Fasta :-

    >EHI_194060 ATGAAAGGATTTGGTCTTCAAGTATATTTTTTCCAAACAGTAATTTGTTCATTAGTTGTT ATTAATTTCATGTATTACAGATATAGTATGAGTGGAAATGTTATTACTCTTAATACTTTT ATTCAAGAAATTTTTACATTGAAAGGAAAATGGATTTCAACACTTATAAAAGCAGGAATG GGGTTTTTAAGTATTTTCTGTCTTCGAGTTATTTTATATTATTGTCATATTGACACTTCT AATTTATTTAGTAATTTTTACACTGATGGAGAGTTAGATATTCCTGTTGTTCTTGACAAT CTTTTTTTCTCTGTTATAACGGAAGAAATTGCTTTAAGACGAAGTATGCTTAACACAATT AAAACTTATACTCCAACATCTAAAAACTATCTCTTTATCATATCAGGAATTTGGTTTGGT CTAATTCATTTTGTTAATATCGGCACTTCTTCATTTACTGTTACTTATGTTTTATTCCAA ATGTCTTATGGTATGGTTATCGGTTATACTTTCGGTATCTTCACTGAATATCTTGGTATT TTCCCATCTATCATTCTTCATTCAATGAATAACGCTTGTGCTATTTTTATTCCTTTTGTT TTCTCACCTTTCCTTCTTCTTTATTCAATTTTATCCGCTTTATTATTGATTTATTTATCT CACAAATTACTGATATCTCTTTCTCTTTAA
  • Download Fasta

  • Fasta :-

    MKGFGLQVYFFQTVICSLVVINFMYYRYSMSGNVITLNTFIQEIFTLKGKWISTLIKAGM GFLSIFCLRVILYYCHIDTSNLFSNFYTDGELDIPVVLDNLFFSVITEEIALRRSMLNTI KTYTPTSKNYLFIISGIWFGLIHFVNIGTSSFTVTYVLFQMSYGMVIGYTFGIFTEYLGI FPSIILHSMNNACAIFIPFVFSPFLLLYSILSALLLIYLSHKLLISLSL

    No Results
    No Results
No Results
No Results
No Results

EHI_194060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India