EHI_194570 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_194570OTHER0.9998560.0000880.000056
No Results

  • Fasta :-

    >EHI_194570 MEIDGERKSVLKAYLQKLKTYQAKEEALEKIKETLKVSKENMGRNEEMLLSLQTIGMSIG EVLKCLSEEKYIVKVSLGPHYVVGCRSCIDKKKITQGTRVALDVSTNTIMKILPREVHPA VYSMTVESPGKVKYEDIGGLRNQMREIREVIELPMTNPELFERVGVKAPKGVLLYGPPGT GKTLLARALASNLECHFLKVVASGIVDKYLGESARLIREMFAYAREHQPCVIFMDEIDAI AGKRIAEGIHSDREIQRTLMELLAQMDGFNEISKVKIIMATNRPDVLDPALMRPGRLDRK IEISLPNDQGRIEILKIHSKKMNIQEEVDYEAMGKLTEGFNGADLRNVCTEAGMFAIRDD RDYCIEEDFFKAIRKQAEAKKLENQFGDIKI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_194570.fa Sequence name : EHI_194570 Sequence length : 391 VALUES OF COMPUTED PARAMETERS Coef20 : 3.625 CoefTot : 0.000 ChDiff : 1 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.629 1.106 -0.009 0.459 MesoH : -0.794 0.337 -0.393 0.188 MuHd_075 : 40.735 17.114 11.837 7.763 MuHd_095 : 9.867 16.790 5.437 4.286 MuHd_100 : 6.607 14.382 4.178 2.768 MuHd_105 : 4.952 8.635 1.861 1.352 Hmax_075 : 11.317 11.433 1.324 4.293 Hmax_095 : 1.100 14.300 0.426 3.560 Hmax_100 : -10.500 7.000 -2.500 1.560 Hmax_105 : -12.600 0.933 -4.858 0.610 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9139 0.0861 DFMC : 0.9326 0.0674
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 391 EHI_194570 MEIDGERKSVLKAYLQKLKTYQAKEEALEKIKETLKVSKENMGRNEEMLLSLQTIGMSIGEVLKCLSEEKYIVKVSLGPH 80 YVVGCRSCIDKKKITQGTRVALDVSTNTIMKILPREVHPAVYSMTVESPGKVKYEDIGGLRNQMREIREVIELPMTNPEL 160 FERVGVKAPKGVLLYGPPGTGKTLLARALASNLECHFLKVVASGIVDKYLGESARLIREMFAYAREHQPCVIFMDEIDAI 240 AGKRIAEGIHSDREIQRTLMELLAQMDGFNEISKVKIIMATNRPDVLDPALMRPGRLDRKIEISLPNDQGRIEILKIHSK 320 KMNIQEEVDYEAMGKLTEGFNGADLRNVCTEAGMFAIRDDRDYCIEEDFFKAIRKQAEAKKLENQFGDIKI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_194570 7 MEIDGER|KS 0.061 . EHI_194570 8 EIDGERK|SV 0.133 . EHI_194570 12 ERKSVLK|AY 0.076 . EHI_194570 17 LKAYLQK|LK 0.064 . EHI_194570 19 AYLQKLK|TY 0.064 . EHI_194570 24 LKTYQAK|EE 0.062 . EHI_194570 30 KEEALEK|IK 0.060 . EHI_194570 32 EALEKIK|ET 0.058 . EHI_194570 36 KIKETLK|VS 0.053 . EHI_194570 39 ETLKVSK|EN 0.061 . EHI_194570 44 SKENMGR|NE 0.087 . EHI_194570 64 SIGEVLK|CL 0.067 . EHI_194570 70 KCLSEEK|YI 0.061 . EHI_194570 74 EEKYIVK|VS 0.052 . EHI_194570 86 HYVVGCR|SC 0.114 . EHI_194570 91 CRSCIDK|KK 0.087 . EHI_194570 92 RSCIDKK|KI 0.134 . EHI_194570 93 SCIDKKK|IT 0.118 . EHI_194570 99 KITQGTR|VA 0.077 . EHI_194570 111 STNTIMK|IL 0.064 . EHI_194570 115 IMKILPR|EV 0.159 . EHI_194570 131 TVESPGK|VK 0.060 . EHI_194570 133 ESPGKVK|YE 0.070 . EHI_194570 141 EDIGGLR|NQ 0.071 . EHI_194570 145 GLRNQMR|EI 0.147 . EHI_194570 148 NQMREIR|EV 0.353 . EHI_194570 163 NPELFER|VG 0.080 . EHI_194570 167 FERVGVK|AP 0.065 . EHI_194570 170 VGVKAPK|GV 0.075 . EHI_194570 182 GPPGTGK|TL 0.058 . EHI_194570 187 GKTLLAR|AL 0.097 . EHI_194570 199 LECHFLK|VV 0.081 . EHI_194570 208 ASGIVDK|YL 0.087 . EHI_194570 215 YLGESAR|LI 0.106 . EHI_194570 218 ESARLIR|EM 0.240 . EHI_194570 225 EMFAYAR|EH 0.077 . EHI_194570 243 IDAIAGK|RI 0.072 . EHI_194570 244 DAIAGKR|IA 0.215 . EHI_194570 253 EGIHSDR|EI 0.093 . EHI_194570 257 SDREIQR|TL 0.119 . EHI_194570 274 GFNEISK|VK 0.058 . EHI_194570 276 NEISKVK|II 0.064 . EHI_194570 283 IIMATNR|PD 0.073 . EHI_194570 293 LDPALMR|PG 0.072 . EHI_194570 296 ALMRPGR|LD 0.316 . EHI_194570 299 RPGRLDR|KI 0.434 . EHI_194570 300 PGRLDRK|IE 0.067 . EHI_194570 311 LPNDQGR|IE 0.121 . EHI_194570 316 GRIEILK|IH 0.071 . EHI_194570 320 ILKIHSK|KM 0.067 . EHI_194570 321 LKIHSKK|MN 0.182 . EHI_194570 335 DYEAMGK|LT 0.061 . EHI_194570 346 FNGADLR|NV 0.144 . EHI_194570 358 AGMFAIR|DD 0.097 . EHI_194570 361 FAIRDDR|DY 0.356 . EHI_194570 371 IEEDFFK|AI 0.073 . EHI_194570 374 DFFKAIR|KQ 0.070 . EHI_194570 375 FFKAIRK|QA 0.102 . EHI_194570 380 RKQAEAK|KL 0.093 . EHI_194570 381 KQAEAKK|LE 0.095 . EHI_194570 390 NQFGDIK|I- 0.058 . ____________________________^_________________

  • Fasta :-

    >EHI_194570 ATGGAGATAGATGGAGAAAGAAAAAGTGTATTAAAAGCATATTTACAGAAATTGAAAACA TACCAAGCAAAAGAAGAGGCGTTAGAAAAAATAAAAGAGACGTTAAAAGTTAGTAAAGAG AATATGGGAAGGAATGAGGAGATGTTATTATCATTACAAACGATTGGGATGTCCATTGGA GAAGTACTCAAATGTTTAAGTGAAGAGAAGTATATTGTCAAAGTGTCATTAGGACCACAT TATGTAGTTGGATGCCGAAGTTGTATTGACAAGAAAAAGATAACACAAGGAACAAGAGTT GCACTTGATGTGTCTACTAATACTATAATGAAAATCTTACCAAGAGAAGTTCACCCAGCA GTATATTCGATGACAGTAGAAAGTCCAGGGAAAGTTAAATATGAAGATATTGGAGGATTA AGAAATCAAATGAGAGAAATACGAGAAGTAATTGAATTACCAATGACAAATCCCGAATTA TTTGAACGAGTAGGAGTTAAAGCACCTAAAGGAGTATTATTATATGGACCACCAGGAACA GGAAAGACACTACTTGCAAGAGCACTTGCAAGTAATTTAGAATGTCACTTTTTAAAAGTT GTTGCAAGTGGGATTGTAGATAAATATCTTGGAGAGAGTGCAAGATTAATTCGAGAGATG TTTGCATATGCACGAGAACATCAACCATGTGTAATATTTATGGATGAAATAGATGCTATT GCAGGGAAACGAATTGCAGAAGGGATACACAGTGATAGAGAAATTCAAAGAACATTAATG GAGTTATTAGCACAAATGGATGGGTTTAATGAAATAAGTAAAGTTAAAATTATTATGGCA ACCAATAGACCTGATGTTCTTGATCCAGCATTAATGCGACCAGGAAGACTTGATAGAAAA ATCGAAATTTCACTTCCAAATGACCAAGGAAGAATTGAAATTTTAAAAATTCATTCTAAA AAGATGAATATTCAAGAAGAAGTTGATTATGAAGCAATGGGGAAATTAACAGAAGGATTT AATGGAGCAGATTTAAGAAATGTATGTACTGAAGCAGGGATGTTTGCTATTAGAGATGAT AGAGATTATTGTATTGAAGAAGACTTTTTCAAAGCAATAAGAAAACAAGCAGAAGCTAAG AAATTAGAGAATCAGTTTGGTGATATTAAAATTTAA
  • Download Fasta

  • Fasta :-

    MEIDGERKSVLKAYLQKLKTYQAKEEALEKIKETLKVSKENMGRNEEMLLSLQTIGMSIG EVLKCLSEEKYIVKVSLGPHYVVGCRSCIDKKKITQGTRVALDVSTNTIMKILPREVHPA VYSMTVESPGKVKYEDIGGLRNQMREIREVIELPMTNPELFERVGVKAPKGVLLYGPPGT GKTLLARALASNLECHFLKVVASGIVDKYLGESARLIREMFAYAREHQPCVIFMDEIDAI AGKRIAEGIHSDREIQRTLMELLAQMDGFNEISKVKIIMATNRPDVLDPALMRPGRLDRK IEISLPNDQGRIEILKIHSKKMNIQEEVDYEAMGKLTEGFNGADLRNVCTEAGMFAIRDD RDYCIEEDFFKAIRKQAEAKKLENQFGDIKI

  • title: ATP binding site
  • coordinates: P177,P178,G179,T180,G181,K182,T183,L184,D235,N282
No Results
No Results
IDSitePeptideScoreMethod
EHI_194570330 YEEVDYEAMG0.992unsp

EHI_194570      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India