EHI_194580 | CAAX amino terminal protease family

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

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_IDPredictionOTHERSPmTPCS_Position
EHI_194580OTHER1.0000000.0000000.000000
No Results

  • Fasta :-

    >EHI_194580 MNNTSTDNTGNLNTLSKDTKNNQTLPYYQLSKLFVMCGIVCLEFFFIHLILAIVMKGFGL QVYFFQTVICSLVVINFMYYRYSMSGNVITLNTFIQEIFTLKGKWISTLIKAGMGFLSIF CLRVILYYCHIDTSNLFSNFYTDGELDIPVVLDNLFFSVITEEIALRRSMLNTIKTYTPT SKNYLFIISGIWFGLIHFVNIGTSSFTVTYVLFQMSYGMVIGYTFGIFTEYLGIFPSIIL HSMNNACAIFIPFVFSPFLLLYSILSALLLIYLSHKLLISLSL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_194580.fa Sequence name : EHI_194580 Sequence length : 283 VALUES OF COMPUTED PARAMETERS Coef20 : 3.605 CoefTot : -0.156 ChDiff : 2 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.235 2.688 0.422 0.889 MesoH : 1.487 1.440 0.152 0.624 MuHd_075 : 38.725 17.698 11.311 5.557 MuHd_095 : 24.700 14.401 6.036 3.530 MuHd_100 : 27.264 16.275 6.796 4.276 MuHd_105 : 21.902 13.658 5.742 3.693 Hmax_075 : 11.900 3.617 0.740 2.263 Hmax_095 : 6.600 3.700 -0.927 1.650 Hmax_100 : 6.600 3.700 -0.927 1.650 Hmax_105 : 3.733 2.100 -1.240 1.178 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9240 0.0760 DFMC : 0.8901 0.1099
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 283 EHI_194580 MNNTSTDNTGNLNTLSKDTKNNQTLPYYQLSKLFVMCGIVCLEFFFIHLILAIVMKGFGLQVYFFQTVICSLVVINFMYY 80 RYSMSGNVITLNTFIQEIFTLKGKWISTLIKAGMGFLSIFCLRVILYYCHIDTSNLFSNFYTDGELDIPVVLDNLFFSVI 160 TEEIALRRSMLNTIKTYTPTSKNYLFIISGIWFGLIHFVNIGTSSFTVTYVLFQMSYGMVIGYTFGIFTEYLGIFPSIIL 240 HSMNNACAIFIPFVFSPFLLLYSILSALLLIYLSHKLLISLSL 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_194580 17 NLNTLSK|DT 0.079 . EHI_194580 20 TLSKDTK|NN 0.071 . EHI_194580 32 PYYQLSK|LF 0.055 . EHI_194580 56 ILAIVMK|GF 0.085 . EHI_194580 81 INFMYYR|YS 0.102 . EHI_194580 102 QEIFTLK|GK 0.061 . EHI_194580 104 IFTLKGK|WI 0.072 . EHI_194580 111 WISTLIK|AG 0.070 . EHI_194580 123 LSIFCLR|VI 0.076 . EHI_194580 167 TEEIALR|RS 0.066 . EHI_194580 168 EEIALRR|SM 0.154 . EHI_194580 175 SMLNTIK|TY 0.058 . EHI_194580 182 TYTPTSK|NY 0.065 . EHI_194580 276 LIYLSHK|LL 0.059 . ____________________________^_________________

  • Fasta :-

    >EHI_194580 ATGAATAATACTTCTACTGACAACACTGGCAATTTAAATACTCTTAGCAAAGATACTAAG AATAACCAAACATTACCATATTATCAATTAAGTAAATTATTTGTAATGTGTGGTATTGTT TGCTTAGAATTTTTTTTCATTCATCTCATTTTAGCTATAGTAATGAAAGGATTTGGTCTT CAAGTATATTTTTTCCAAACAGTAATTTGTTCATTAGTTGTTATTAATTTCATGTATTAC AGATATAGTATGAGTGGAAATGTTATTACTCTTAATACTTTTATTCAAGAAATTTTTACA TTGAAAGGAAAATGGATTTCAACACTTATAAAAGCAGGAATGGGGTTTTTAAGTATTTTC TGTCTTCGAGTTATTTTATATTATTGTCATATTGACACTTCTAATTTATTTAGTAATTTT TACACTGATGGAGAGTTAGATATTCCTGTTGTTCTTGACAATCTTTTTTTCTCTGTTATA ACAGAAGAAATTGCTTTAAGACGAAGTATGCTTAACACAATTAAAACTTATACTCCAACA TCTAAAAACTATCTCTTTATCATATCAGGAATTTGGTTTGGTCTAATTCATTTTGTTAAT ATCGGCACTTCTTCATTTACTGTTACTTATGTTTTATTCCAAATGTCTTATGGTATGGTT ATCGGTTATACTTTCGGTATCTTCACTGAATATCTTGGTATTTTCCCATCTATCATTCTT CATTCAATGAATAACGCTTGTGCTATTTTTATTCCTTTTGTTTTCTCACCTTTCCTTCTT CTTTATTCAATTTTATCCGCTTTATTATTGATTTATTTATCTCACAAATTACTGATATCT CTTTCTCTTTAA
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  • Fasta :-

    MNNTSTDNTGNLNTLSKDTKNNQTLPYYQLSKLFVMCGIVCLEFFFIHLILAIVMKGFGL QVYFFQTVICSLVVINFMYYRYSMSGNVITLNTFIQEIFTLKGKWISTLIKAGMGFLSIF CLRVILYYCHIDTSNLFSNFYTDGELDIPVVLDNLFFSVITEEIALRRSMLNTIKTYTPT SKNYLFIISGIWFGLIHFVNIGTSSFTVTYVLFQMSYGMVIGYTFGIFTEYLGIFPSIIL HSMNNACAIFIPFVFSPFLLLYSILSALLLIYLSHKLLISLSL

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EHI_194580      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India