EHI_197020 | signal peptidase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_197020OTHER0.9893660.0078480.002785
No Results

  • Fasta :-

    >EHI_197020 MKLDIQLYLIEMFAPIQSLKSMGPRLIIQNVTQFGLIVASAVILWKALCIFFFTEAPIVV ILSGSMEPGFKRGDLMFLTNKGGVDNIQIGDIVVYNLPSKGIPIIHRVIEIHKDTKGDVR FLTKGDNNPVDDRGLYGGPLWLKPDQIIGKSYAHIPYVGMITIALTDYPILKWTVIGLLL ISVLLNKDQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_197020.fa Sequence name : EHI_197020 Sequence length : 189 VALUES OF COMPUTED PARAMETERS Coef20 : 3.810 CoefTot : 0.009 ChDiff : 2 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.865 2.424 0.360 0.793 MesoH : 0.466 1.064 -0.107 0.442 MuHd_075 : 11.008 7.763 5.137 2.623 MuHd_095 : 11.633 8.451 2.483 2.559 MuHd_100 : 10.773 9.339 1.893 2.037 MuHd_105 : 13.152 12.455 3.295 2.599 Hmax_075 : 16.100 17.383 2.937 6.160 Hmax_095 : 12.863 12.775 0.931 5.066 Hmax_100 : 14.900 15.500 2.000 5.560 Hmax_105 : 11.550 15.400 1.280 5.332 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9701 0.0299 DFMC : 0.9753 0.0247
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 189 EHI_197020 MKLDIQLYLIEMFAPIQSLKSMGPRLIIQNVTQFGLIVASAVILWKALCIFFFTEAPIVVILSGSMEPGFKRGDLMFLTN 80 KGGVDNIQIGDIVVYNLPSKGIPIIHRVIEIHKDTKGDVRFLTKGDNNPVDDRGLYGGPLWLKPDQIIGKSYAHIPYVGM 160 ITIALTDYPILKWTVIGLLLISVLLNKDQ 240 ................................................................................ 80 ................................................................................ 160 ............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_197020 2 -----MK|LD 0.061 . EHI_197020 20 APIQSLK|SM 0.094 . EHI_197020 25 LKSMGPR|LI 0.145 . EHI_197020 46 SAVILWK|AL 0.072 . EHI_197020 71 SMEPGFK|RG 0.056 . EHI_197020 72 MEPGFKR|GD 0.151 . EHI_197020 81 LMFLTNK|GG 0.058 . EHI_197020 100 VYNLPSK|GI 0.071 . EHI_197020 107 GIPIIHR|VI 0.101 . EHI_197020 113 RVIEIHK|DT 0.066 . EHI_197020 116 EIHKDTK|GD 0.062 . EHI_197020 120 DTKGDVR|FL 0.109 . EHI_197020 124 DVRFLTK|GD 0.061 . EHI_197020 133 NNPVDDR|GL 0.101 . EHI_197020 143 GGPLWLK|PD 0.061 . EHI_197020 150 PDQIIGK|SY 0.081 . EHI_197020 172 TDYPILK|WT 0.072 . EHI_197020 187 ISVLLNK|DQ 0.066 . ____________________________^_________________

  • Fasta :-

    >EHI_197020 ATGAAACTTGATATTCAGTTGTACCTAATTGAGATGTTTGCTCCTATTCAATCTCTTAAG TCTATGGGTCCTAGATTAATTATTCAAAATGTTACTCAGTTTGGATTAATTGTTGCATCT GCTGTAATATTGTGGAAAGCACTTTGTATTTTCTTTTTTACAGAAGCACCAATTGTTGTT ATATTAAGTGGTTCTATGGAACCAGGATTTAAAAGAGGTGATTTAATGTTTTTAACAAAT AAAGGTGGTGTTGACAATATTCAGATAGGTGATATTGTTGTTTATAATTTACCATCTAAA GGAATTCCAATCATTCACAGAGTAATAGAAATTCATAAAGATACTAAAGGTGATGTTCGT TTTTTGACTAAAGGAGATAATAATCCTGTTGATGATAGAGGATTATATGGAGGTCCTTTA TGGTTAAAACCAGATCAAATTATTGGAAAATCATATGCTCATATTCCATATGTAGGAATG ATTACAATTGCATTAACTGATTACCCAATCCTTAAATGGACGGTTATTGGGTTATTGTTA ATCAGTGTTTTATTAAACAAAGACCAATAA
  • Download Fasta

  • Fasta :-

    MKLDIQLYLIEMFAPIQSLKSMGPRLIIQNVTQFGLIVASAVILWKALCIFFFTEAPIVV ILSGSMEPGFKRGDLMFLTNKGGVDNIQIGDIVVYNLPSKGIPIIHRVIEIHKDTKGDVR FLTKGDNNPVDDRGLYGGPLWLKPDQIIGKSYAHIPYVGMITIALTDYPILKWTVIGLLL ISVLLNKDQ

  • title: Catalytic site
  • coordinates: S65,H106
No Results
No Results
No Results

EHI_197020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India