EHI_197460 | peptidase S54 (rhomboid) family protein

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_197460OTHER0.9999930.0000070.000000
No Results

  • Fasta :-

    >EHI_197460 MDDDREPTPTSTAKAQLYGVDGNPQELEVPIPVNYFKLYGYSCCPCFIPPPCSPANSHRY CLALFSASFMLSIVQIIMLIVEISLDGFEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQ LWRLITPIFLHGGIIHLLCNLTMQLRLGMIIERRWNSFRFLIVYFVSGIIGNCFSIICQP TSIGVGASGSLLGIFGGFVVDIIINKKKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYS AHVFGFIGGAICAFGLFAHQNPWITKKLWIKISIWIICPIICLAVLLLTLLLLYLGVLNV GKCN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_197460.fa Sequence name : EHI_197460 Sequence length : 304 VALUES OF COMPUTED PARAMETERS Coef20 : 3.215 CoefTot : 0.000 ChDiff : 6 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.476 3.135 0.724 0.932 MesoH : 1.251 1.608 0.133 0.649 MuHd_075 : 9.851 3.527 2.147 2.979 MuHd_095 : 14.586 4.622 3.597 0.562 MuHd_100 : 12.367 1.929 2.897 1.289 MuHd_105 : 10.503 5.029 2.226 1.955 Hmax_075 : -3.300 -2.200 -2.416 1.100 Hmax_095 : -5.300 -3.063 -3.635 -0.770 Hmax_100 : -1.900 -3.300 -2.571 0.510 Hmax_105 : -10.587 -4.317 -5.120 0.175 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9968 0.0032 DFMC : 0.9952 0.0048
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 304 EHI_197460 MDDDREPTPTSTAKAQLYGVDGNPQELEVPIPVNYFKLYGYSCCPCFIPPPCSPANSHRYCLALFSASFMLSIVQIIMLI 80 VEISLDGFEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRLGMIIERRWNSFRF 160 LIVYFVSGIIGNCFSIICQPTSIGVGASGSLLGIFGGFVVDIIINKKKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYS 240 AHVFGFIGGAICAFGLFAHQNPWITKKLWIKISIWIICPIICLAVLLLTLLLLYLGVLNVGKCN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_197460 5 --MDDDR|EP 0.071 . EHI_197460 14 TPTSTAK|AQ 0.074 . EHI_197460 37 IPVNYFK|LY 0.067 . EHI_197460 59 SPANSHR|YC 0.152 . EHI_197460 90 SLDGFEK|PS 0.063 . EHI_197460 102 MLGPTSK|AM 0.063 . EHI_197460 110 MNTLGAK|ND 0.059 . EHI_197460 116 KNDYEIK|CN 0.061 . EHI_197460 123 CNYQLWR|LI 0.122 . EHI_197460 146 NLTMQLR|LG 0.076 . EHI_197460 153 LGMIIER|RW 0.073 . EHI_197460 154 GMIIERR|WN 0.126 . EHI_197460 159 RRWNSFR|FL 0.148 . EHI_197460 206 VDIIINK|KK 0.059 . EHI_197460 207 DIIINKK|KF 0.077 . EHI_197460 208 IIINKKK|FE 0.122 . EHI_197460 212 KKKFENR|VW 0.083 . EHI_197460 220 WLSLIGR|LM 0.090 . EHI_197460 266 QNPWITK|KL 0.067 . EHI_197460 267 NPWITKK|LW 0.113 . EHI_197460 271 TKKLWIK|IS 0.072 . EHI_197460 302 GVLNVGK|CN 0.063 . ____________________________^_________________

  • Fasta :-

    >EHI_197460 CCACATAACAATATACATACATTTGATTGGAGTAATGAAAAAGAGGGGAGACATGAGGTT CGAGTTGTTTACAAAGATATGGATGATGATAGAGAACCAACACCTACTTCAACAGCTAAA GCCCAATTATATGGGGTAGATGGAAATCCTCAAGAATTAGAAGTGCCAATTCCTGTGAAT TATTTTAAGCTTTATGGATATTCATGTTGTCCATGTTTTATTCCACCACCATGTTCACCA GCAAATTCACATAGGTATTGTTTAGCACTATTTTCAGCAAGTTTTATGTTATCAATTGTT CAAATTATTATGTTAATTGTAGAAATTTCATTAGATGGCTTTGAGAAACCATCAATTAAT TGGATGTTAGGACCAACATCAAAAGCAATGAACACTTTAGGAGCGAAGAATGACTATGAG ATTAAATGTAATTATCAATTATGGAGATTAATAACCCCTATTTTTCTTCATGGAGGAATT ATTCATTTACTTTGTAATTTAACAATGCAATTAAGACTTGGGATGATTATAGAACGTAGA TGGAATTCATTCAGATTTTTGATTGTTTATTTTGTTAGTGGTATTATTGGGAATTGTTTT TCTATTATTTGTCAACCAACAAGTATTGGAGTTGGAGCTTCAGGTTCGTTGCTTGGAATA TTTGGAGGATTTGTTGTTGATATTATAATCAACAAAAAAAAATTTGAAAACAGAGTATGG TTAAGTCTTATTGGAAGATTAATGATATCAATAATAATTATCTTTGTATTTAGTTTTGCA CCTGGAATAGATTATTCAGCACATGTCTTTGGTTTTATTGGAGGAGCAATTTGTGCTTTT GGATTATTTGCACATCAAAACCCTTGGATAACAAAAAAATTGTGGATCAAAATAAGTATA TGGATAATTTGCCCAATTATATGTCTTGCAGTGTTATTATTGACATTGTTATTATTATAT CTTGGAGTACTCAATGTTGGAAAATGCAATTAA
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  • Fasta :-

    MDDDREPTPTSTAKAQLYGVDGNPQELEVPIPVNYFKLYGYSCCPCFIPPPCSPANSHRY CLALFSASFMLSIVQIIMLIVEISLDGFEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQ LWRLITPIFLHGGIIHLLCNLTMQLRLGMIIERRWNSFRFLIVYFVSGIIGNCFSIICQP TSIGVGASGSLLGIFGGFVVDIIINKKKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYS AHVFGFIGGAICAFGLFAHQNPWITKKLWIKISIWIICPIICLAVLLLTLLLLYLGVLNV GKCN

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_197460T100.5290.674EHI_197460T80.5200.195
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
EHI_197460T100.5290.674EHI_197460T80.5200.195
No Results

EHI_197460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India