ETH_00000395 | subtilase family serine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00000395OTHER0.9986150.0010420.000342
No Results

  • Fasta :-

    >ETH_00000395 MDDGGVQARRAWKISKGGGGTISEQPMNTVAIIDFGFNLAHEDLIDSWWRNAIFEFPEYS EWPDNCFDGIDNDNNGYIDDCMGYDFSDRSGSPDSFLGQHGTAVASTCCASTNNQKGVAS LGWNLRPMALKID
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00000395.fa Sequence name : ETH_00000395 Sequence length : 133 VALUES OF COMPUTED PARAMETERS Coef20 : 3.102 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 0.953 0.118 0.462 MesoH : -1.257 -0.398 -0.529 0.120 MuHd_075 : 10.225 9.526 4.948 0.774 MuHd_095 : 27.554 6.842 5.637 4.169 MuHd_100 : 41.622 13.433 9.555 6.949 MuHd_105 : 48.546 17.842 11.736 8.758 Hmax_075 : -1.867 5.717 -1.027 1.097 Hmax_095 : 1.300 -0.500 -2.678 1.490 Hmax_100 : 11.100 3.000 -0.004 3.470 Hmax_105 : 7.600 5.700 0.147 3.390 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9772 0.0228 DFMC : 0.9472 0.0528
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 133 ETH_00000395 MDDGGVQARRAWKISKGGGGTISEQPMNTVAIIDFGFNLAHEDLIDSWWRNAIFEFPEYSEWPDNCFDGIDNDNNGYIDD 80 CMGYDFSDRSGSPDSFLGQHGTAVASTCCASTNNQKGVASLGWNLRPMALKID 160 ................................................................................ 80 ..................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00000395 9 DGGVQAR|RA 0.124 . ETH_00000395 10 GGVQARR|AW 0.145 . ETH_00000395 13 QARRAWK|IS 0.214 . ETH_00000395 16 RAWKISK|GG 0.075 . ETH_00000395 50 LIDSWWR|NA 0.094 . ETH_00000395 89 GYDFSDR|SG 0.100 . ETH_00000395 116 ASTNNQK|GV 0.072 . ETH_00000395 126 SLGWNLR|PM 0.080 . ETH_00000395 131 LRPMALK|ID 0.066 . ____________________________^_________________

  • Fasta :-

    >ETH_00000395 ATGGACGACGGCGGAGTCCAGGCGAGAAGGGCCTGGAAAATCTCAAAAGGAGGCGGAGGG ACAATATCAGAGCAGCCGATGAACACTGTCGCCATCATCGACTTCGGATTCAACTTGGCG CACGAAGACTTGATAGACAGTTGGTGGCGAAATGCCATTTTTGAATTTCCAGAATATTCC GAATGGCCAGATAATTGTTTTGACGGAATTGACAATGACAACAACGGGTACATCGACGAC TGCATGGGATACGACTTTTCCGACCGCAGCGGAAGCCCCGACAGCTTCTTGGGGCAACAC GGAACTGCTGTGGCCAGCACTTGCTGCGCCTCGACAAACAACCAAAAGGGAGTGGCCTCT TTGGGGTGGAACTTGAGGCCCATGGCTTTGAAGATCGAC
  • Download Fasta

  • Fasta :-

    MDDGGVQARRAWKISKGGGGTISEQPMNTVAIIDFGFNLAHEDLIDSWWRNAIFEFPEYS EWPDNCFDGIDNDNNGYIDDCMGYDFSDRSGSPDSFLGQHGTAVASTCCASTNNQKGVAS LGWNLRPMALKID

    No Results
No Results
No Results
IDSitePeptideScoreMethod
ETH_0000039592 SDRSGSPDSF0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India