ETH_00001340 | proteasome subunit alpha type 7, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00001340OTHER0.9999650.0000210.000014
No Results

  • Fasta :-

    >ETH_00001340 MSYDRAITVFSPDGHLLQVEYAIEAVRRGGCVVGVRGKDAVVLAVERKAAAKLQEPRTSR KLLLLDDGLCCAFAGLHADARVLIAKAQLEGQSYRLNNDTPPTADYMARYIAQVQQKYTH RGGVRPFGLSTLLAGVDGEGKVALYQTEPSGIFARWKAQALGRNSKTVQEYLEKNYKEDL SEEEAFSLAIRALTEVVEAGKKNVECAIVRKHAVEFLPEEKIAAEVERLEAQKKSAEEEV KPSDS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00001340.fa Sequence name : ETH_00001340 Sequence length : 245 VALUES OF COMPUTED PARAMETERS Coef20 : 3.580 CoefTot : -0.045 ChDiff : -1 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.582 1.488 0.124 0.529 MesoH : -1.124 0.361 -0.454 0.080 MuHd_075 : 28.573 14.937 6.543 4.663 MuHd_095 : 12.129 9.750 3.119 2.812 MuHd_100 : 14.109 14.515 5.303 4.707 MuHd_105 : 15.524 17.553 6.307 6.098 Hmax_075 : 12.862 11.025 1.795 4.043 Hmax_095 : 7.000 6.037 0.113 3.526 Hmax_100 : 7.400 12.100 0.248 4.210 Hmax_105 : 3.600 11.600 -0.028 4.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9648 0.0352 DFMC : 0.9678 0.0322
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 245 ETH_00001340 MSYDRAITVFSPDGHLLQVEYAIEAVRRGGCVVGVRGKDAVVLAVERKAAAKLQEPRTSRKLLLLDDGLCCAFAGLHADA 80 RVLIAKAQLEGQSYRLNNDTPPTADYMARYIAQVQQKYTHRGGVRPFGLSTLLAGVDGEGKVALYQTEPSGIFARWKAQA 160 LGRNSKTVQEYLEKNYKEDLSEEEAFSLAIRALTEVVEAGKKNVECAIVRKHAVEFLPEEKIAAEVERLEAQKKSAEEEV 240 KPSDS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00001340 5 --MSYDR|AI 0.082 . ETH_00001340 27 YAIEAVR|RG 0.079 . ETH_00001340 28 AIEAVRR|GG 0.155 . ETH_00001340 36 GCVVGVR|GK 0.099 . ETH_00001340 38 VVGVRGK|DA 0.069 . ETH_00001340 47 VVLAVER|KA 0.083 . ETH_00001340 48 VLAVERK|AA 0.110 . ETH_00001340 52 ERKAAAK|LQ 0.067 . ETH_00001340 57 AKLQEPR|TS 0.082 . ETH_00001340 60 QEPRTSR|KL 0.138 . ETH_00001340 61 EPRTSRK|LL 0.071 . ETH_00001340 81 GLHADAR|VL 0.104 . ETH_00001340 86 ARVLIAK|AQ 0.070 . ETH_00001340 95 LEGQSYR|LN 0.104 . ETH_00001340 109 TADYMAR|YI 0.161 . ETH_00001340 117 IAQVQQK|YT 0.100 . ETH_00001340 121 QQKYTHR|GG 0.079 . ETH_00001340 125 THRGGVR|PF 0.094 . ETH_00001340 141 GVDGEGK|VA 0.055 . ETH_00001340 155 PSGIFAR|WK 0.133 . ETH_00001340 157 GIFARWK|AQ 0.069 . ETH_00001340 163 KAQALGR|NS 0.107 . ETH_00001340 166 ALGRNSK|TV 0.165 . ETH_00001340 174 VQEYLEK|NY 0.058 . ETH_00001340 177 YLEKNYK|ED 0.059 . ETH_00001340 191 AFSLAIR|AL 0.113 . ETH_00001340 201 EVVEAGK|KN 0.053 . ETH_00001340 202 VVEAGKK|NV 0.102 . ETH_00001340 210 VECAIVR|KH 0.068 . ETH_00001340 211 ECAIVRK|HA 0.105 . ETH_00001340 221 EFLPEEK|IA 0.063 . ETH_00001340 228 IAAEVER|LE 0.098 . ETH_00001340 233 ERLEAQK|KS 0.063 . ETH_00001340 234 RLEAQKK|SA 0.234 . ETH_00001340 241 SAEEEVK|PS 0.067 . ____________________________^_________________

  • Fasta :-

    >ETH_00001340 ATGAGCTATGACAGAGCCATCACCGTCTTCTCCCCTGACGGGCACCTCCTGCAGGTGGAG TACGCCATCGAGGCCGTTAGGCGGGGCGGCTGCGTTGTGGGCGTGAGGGGAAAAGATGCG GTGGTGCTTGCGGTAGAGAGGAAGGCAGCAGCGAAGCTGCAAGAGCCCAGGACTAGCCGT AAATTGCTCCTGCTTGACGACGGCCTGTGCTGCGCTTTTGCGGGACTGCATGCGGACGCG CGGGTGTTGATAGCGAAGGCCCAGCTGGAGGGTCAAAGCTACCGGCTCAACAATGACACA CCACCCACAGCAGACTATATGGCCAGATATATTGCACAAGTGCAGCAGAAATATACTCAT AGAGGCGGCGTGCGGCCGTTTGGGTTGTCTACGCTGCTAGCTGGGGTGGACGGGGAGGGC AAAGTGGCCCTCTACCAAACTGAGCCCTCGGGCATATTTGCACGGTGGAAGGCACAAGCC CTCGGCAGGAACTCAAAAACAGTGCAGGAGTACTTGGAGAAGAATTACAAAGAAGACCTG AGCGAGGAGGAGGCCTTCTCTTTGGCGATAAGAGCCCTCACTGAAGTTGTGGAAGCAGGC AAGAAGAATGTAGAATGCGCAATTGTGCGCAAGCATGCAGTTGAGTTTCTGCCAGAAGAG AAAATTGCAGCAGAGGTGGAGCGACTCGAGGCCCAGAAGAAATCGGCAGAAGAGGAGGTC AAGCCTTCCGACAGCTAA
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  • Fasta :-

    MSYDRAITVFSPDGHLLQVEYAIEAVRRGGCVVGVRGKDAVVLAVERKAAAKLQEPRTSR KLLLLDDGLCCAFAGLHADARVLIAKAQLEGQSYRLNNDTPPTADYMARYIAQVQQKYTH RGGVRPFGLSTLLAGVDGEGKVALYQTEPSGIFARWKAQALGRNSKTVQEYLEKNYKEDL SEEEAFSLAIRALTEVVEAGKKNVECAIVRKHAVEFLPEEKIAAEVERLEAQKKSAEEEV KPSDS

  • title: active site
  • coordinates: G30,E46,K48,K61,R163
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00001340181 SKEDLSEEEA0.997unspETH_00001340235 SAQKKSAEEE0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India