ETH_00001595 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00001595OTHER0.9984150.0000950.001490
No Results

  • Fasta :-

    >ETH_00001595 MPEIHGNAQPISCTVSNAVGHLFLFKYESKNGIFVQQSRCAASETSSALLRNQPLAAHRK TAGTLRSTTTWVAFTRAATKKRSWRKYTITGAAAPPQRPPPLLYHSRRPVVAALDAPDAL FLYEDGFFDVKPSDHGKLCDSPNKGLTGLCSFLSGCVQQFHPRGTLPGWEYTNHAIAIVG WGEDP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00001595.fa Sequence name : ETH_00001595 Sequence length : 185 VALUES OF COMPUTED PARAMETERS Coef20 : 3.326 CoefTot : -1.818 ChDiff : 7 ZoneTo : 114 KR : 16 DE : 3 CleavSite : 110 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.976 0.935 0.082 0.454 MesoH : -0.701 -0.016 -0.422 0.182 MuHd_075 : 50.449 24.946 12.333 10.370 MuHd_095 : 33.131 25.007 7.036 7.361 MuHd_100 : 30.929 23.699 7.440 6.339 MuHd_105 : 39.022 20.734 7.201 7.374 Hmax_075 : 13.300 16.900 0.789 3.824 Hmax_095 : 13.912 17.500 -0.236 4.121 Hmax_100 : 12.100 20.200 2.287 4.410 Hmax_105 : 12.717 12.688 0.495 3.337 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0495 0.9505 DFMC : 0.0210 0.9790 This protein is probably imported in mitochondria. f(Ser) = 0.0877 f(Arg) = 0.0877 CMi = 0.45496 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 185 ETH_00001595 MPEIHGNAQPISCTVSNAVGHLFLFKYESKNGIFVQQSRCAASETSSALLRNQPLAAHRKTAGTLRSTTTWVAFTRAATK 80 KRSWRKYTITGAAAPPQRPPPLLYHSRRPVVAALDAPDALFLYEDGFFDVKPSDHGKLCDSPNKGLTGLCSFLSGCVQQF 160 HPRGTLPGWEYTNHAIAIVGWGEDP 240 ................................................................................ 80 .P.............................................................................. 160 ......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00001595 26 GHLFLFK|YE 0.069 . ETH_00001595 30 LFKYESK|NG 0.058 . ETH_00001595 39 IFVQQSR|CA 0.093 . ETH_00001595 51 TSSALLR|NQ 0.088 . ETH_00001595 59 QPLAAHR|KT 0.090 . ETH_00001595 60 PLAAHRK|TA 0.151 . ETH_00001595 66 KTAGTLR|ST 0.145 . ETH_00001595 76 TWVAFTR|AA 0.159 . ETH_00001595 80 FTRAATK|KR 0.060 . ETH_00001595 81 TRAATKK|RS 0.143 . ETH_00001595 82 RAATKKR|SW 0.578 *ProP* ETH_00001595 85 TKKRSWR|KY 0.365 . ETH_00001595 86 KKRSWRK|YT 0.141 . ETH_00001595 98 AAAPPQR|PP 0.077 . ETH_00001595 107 PLLYHSR|RP 0.070 . ETH_00001595 108 LLYHSRR|PV 0.345 . ETH_00001595 131 DGFFDVK|PS 0.060 . ETH_00001595 137 KPSDHGK|LC 0.078 . ETH_00001595 144 LCDSPNK|GL 0.059 . ETH_00001595 163 VQQFHPR|GT 0.112 . ____________________________^_________________

  • Fasta :-

    >ETH_00001595 ATGCCAGAAATACATGGCAACGCACAGCCCATCAGTTGCACCGTGTCTAATGCAGTGGGT CACTTATTCCTTTTCAAATATGAGTCCAAAAATGGCATTTTCGTGCAACAATCCCGCTGC GCAGCCTCGGAAACTTCCTCCGCTCTCCTGCGGAATCAGCCCCTGGCTGCGCACCGGAAG ACCGCTGGTACGCTCAGGAGTACAACTACGTGGGTGGCTTTTACGAGGGCTGCAACGAAG AAAAGATCATGGAGGAAATATACAATCACGGGTGCGGCTGCCCCCCCACAGCGTCCGCCA CCTCTCTTATACCATTCCCGTAGGCCTGTTGTGGCGGCCCTTGACGCCCCTGACGCTCTT TTTCTTTACGAAGATGGCTTTTTTGATGTGAAGCCTTCTGACCACGGGAAGCTGTGCGAC TCGCCCAACAAGGGGCTGACAGGTTTGTGCAGCTTTCTCTCTGGCTGTGTGCAGCAGTTT CACCCCCGCGGGACTCTACCAGGATGGGAATACACGAACCACGCCATAGCGATCGTGGGC TGGGGTGAAGACCCGTAG
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  • Fasta :-

    MPEIHGNAQPISCTVSNAVGHLFLFKYESKNGIFVQQSRCAASETSSALLRNQPLAAHRK TAGTLRSTTTWVAFTRAATKKRSWRKYTITGAAAPPQRPPPLLYHSRRPVVAALDAPDAL FLYEDGFFDVKPSDHGKLCDSPNKGLTGLCSFLSGCVQQFHPRGTLPGWEYTNHAIAIVG WGEDP

    No Results
No Results
No Results
IDSitePeptideScoreMethod
ETH_0000159583 STKKRSWRKY0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India