ETH_00001600 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
ETH_00001600SP0.0008500.9989810.000169CS pos: 19-20. AEA-DL. Pr: 0.9397
No Results

  • Fasta :-

    >ETH_00001600 MRRIVFAVGAALAVKRAEADLPIHSDVVGTWRFVLGAEEADEPLSCGGGAPNMNMENLDP GMENYYSWITKSGKGLTSRLVLTDQRATRSQTHTRKHWSYLVVTLPNSGLQIGTWTMVYD EGFELRIGKKRFFGLMKYSKAGGKECSRRVNGDSEDPFGNTKCYATDPSKLQMGWTVKVI QNGFKSLKKLPESPLPPQETRAAAEAPFKWGCFYAEKEMPTNTENSFVMAGHGYGLPALP AAGAAAAAGQNSNSRKALLQQSPTGSWTASHSQFAHTPPSELAMYKSHMGYQKFHRAVAY ALPAFAQTGQTPSFGEDPNLFFSVSPNIQLFTTAAAALQDKPYACELPVMLHAEEAAAPL PAEW
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00001600.fa Sequence name : ETH_00001600 Sequence length : 364 VALUES OF COMPUTED PARAMETERS Coef20 : 4.741 CoefTot : 0.869 ChDiff : 3 ZoneTo : 17 KR : 4 DE : 0 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.276 1.100 0.161 0.567 MesoH : -0.124 0.153 -0.370 0.240 MuHd_075 : 21.055 9.387 4.852 5.385 MuHd_095 : 17.400 9.848 4.648 2.992 MuHd_100 : 7.264 6.702 0.790 2.803 MuHd_105 : 22.139 14.285 4.857 6.063 Hmax_075 : 5.950 12.833 0.464 4.620 Hmax_095 : 4.200 13.700 0.744 3.448 Hmax_100 : 7.300 16.500 0.443 4.460 Hmax_105 : 6.700 14.900 0.641 4.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0615 0.9385 DFMC : 0.1155 0.8845 This protein is probably imported in mitochondria. f(Ser) = 0.0000 f(Arg) = 0.1765 CMi = 0.00000 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 364 ETH_00001600 MRRIVFAVGAALAVKRAEADLPIHSDVVGTWRFVLGAEEADEPLSCGGGAPNMNMENLDPGMENYYSWITKSGKGLTSRL 80 VLTDQRATRSQTHTRKHWSYLVVTLPNSGLQIGTWTMVYDEGFELRIGKKRFFGLMKYSKAGGKECSRRVNGDSEDPFGN 160 TKCYATDPSKLQMGWTVKVIQNGFKSLKKLPESPLPPQETRAAAEAPFKWGCFYAEKEMPTNTENSFVMAGHGYGLPALP 240 AAGAAAAAGQNSNSRKALLQQSPTGSWTASHSQFAHTPPSELAMYKSHMGYQKFHRAVAYALPAFAQTGQTPSFGEDPNL 320 FFSVSPNIQLFTTAAAALQDKPYACELPVMLHAEEAAAPLPAEW 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00001600 2 -----MR|RI 0.086 . ETH_00001600 3 ----MRR|IV 0.294 . ETH_00001600 15 GAALAVK|RA 0.074 . ETH_00001600 16 AALAVKR|AE 0.154 . ETH_00001600 32 DVVGTWR|FV 0.139 . ETH_00001600 71 YYSWITK|SG 0.080 . ETH_00001600 74 WITKSGK|GL 0.068 . ETH_00001600 79 GKGLTSR|LV 0.109 . ETH_00001600 86 LVLTDQR|AT 0.083 . ETH_00001600 89 TDQRATR|SQ 0.441 . ETH_00001600 95 RSQTHTR|KH 0.103 . ETH_00001600 96 SQTHTRK|HW 0.104 . ETH_00001600 126 DEGFELR|IG 0.083 . ETH_00001600 129 FELRIGK|KR 0.104 . ETH_00001600 130 ELRIGKK|RF 0.086 . ETH_00001600 131 LRIGKKR|FF 0.285 . ETH_00001600 137 RFFGLMK|YS 0.077 . ETH_00001600 140 GLMKYSK|AG 0.068 . ETH_00001600 144 YSKAGGK|EC 0.062 . ETH_00001600 148 GGKECSR|RV 0.080 . ETH_00001600 149 GKECSRR|VN 0.278 . ETH_00001600 162 DPFGNTK|CY 0.059 . ETH_00001600 170 YATDPSK|LQ 0.054 . ETH_00001600 178 QMGWTVK|VI 0.068 . ETH_00001600 185 VIQNGFK|SL 0.083 . ETH_00001600 188 NGFKSLK|KL 0.059 . ETH_00001600 189 GFKSLKK|LP 0.080 . ETH_00001600 201 LPPQETR|AA 0.112 . ETH_00001600 209 AAEAPFK|WG 0.059 . ETH_00001600 217 GCFYAEK|EM 0.058 . ETH_00001600 255 GQNSNSR|KA 0.090 . ETH_00001600 256 QNSNSRK|AL 0.158 . ETH_00001600 286 SELAMYK|SH 0.083 . ETH_00001600 293 SHMGYQK|FH 0.073 . ETH_00001600 296 GYQKFHR|AV 0.190 . ETH_00001600 341 AAALQDK|PY 0.068 . ____________________________^_________________

  • Fasta :-

    >ETH_00001600 ATGAGGAGGATAGTGTTTGCCGTGGGTGCAGCGCTTGCTGTCAAGCGGGCGGAAGCTGAT CTTCCCATTCACTCCGACGTTGTCGGGACTTGGCGGTTTGTTTTAGGGGCAGAGGAGGCG GACGAGCCGCTGTCGTGCGGGGGCGGCGCCCCGAACATGAACATGGAAAACTTGGACCCG GGCATGGAAAACTACTACTCGTGGATCACGAAAAGCGGAAAGGGGCTGACCAGCCGGCTC GTCTTGACGGACCAGCGGGCAACTCGCTCGCAGACCCACACGCGGAAGCACTGGAGCTAC TTAGTGGTGACGCTGCCCAACAGTGGCCTGCAGATCGGCACTTGGACAATGGTTTATGAC GAGGGCTTCGAACTGCGCATCGGCAAGAAGCGTTTCTTCGGCCTGATGAAGTACAGCAAG GCGGGGGGCAAGGAGTGCAGCAGGCGGGTGAACGGGGACTCCGAGGACCCTTTTGGCAAC ACAAAGTGCTACGCCACGGACCCTTCGAAGTTGCAAATGGGGTGGACTGTAAAGGTGATT CAAAATGGTTTCAAGTCCCTCAAAAAGCTGCCAGAAAGTCCGCTGCCGCCCCAGGAAACC CGCGCTGCAGCAGAGGCCCCCTTCAAGTGGGGCTGCTTCTACGCAGAAAAAGAAATGCCC ACCAACACGGAGAACTCCTTCGTAATGGCCGGCCACGGCTACGGGCTTCCGGCGCTGCCA GCCGCGGGAGCTGCTGCTGCAGCGGGCCAAAATTCCAACTCAAGAAAAGCTTTGCTGCAA CAAAGCCCCACAGGCTCCTGGACCGCCAGCCACAGCCAGTTCGCCCACACGCCCCCCAGC GAACTCGCCATGTACAAGAGCCACATGGGCTATCAGAAGTTCCACAGGGCAGTGGCTTAC GCGTTGCCCGCGTTCGCCCAGACGGGCCAAACGCCCAGTTTCGGTGAAGACCCAAATCTT TTCTTTTCAGTTTCCCCCAATATTCAACTTTTCACAACTGCAGCCGCGGCTCTGCAGGAC AAGCCCTACGCGTGCGAGTTGCCCGTCATGCTGCACGCTGAGGAGGCTGCAGCGCCCCTC CCGGCCGAGTGGTAA
  • Download Fasta

  • Fasta :-

    MRRIVFAVGAALAVKRAEADLPIHSDVVGTWRFVLGAEEADEPLSCGGGAPNMNMENLDP GMENYYSWITKSGKGLTSRLVLTDQRATRSQTHTRKHWSYLVVTLPNSGLQIGTWTMVYD EGFELRIGKKRFFGLMKYSKAGGKECSRRVNGDSEDPFGNTKCYATDPSKLQMGWTVKVI QNGFKSLKKLPESPLPPQETRAAAEAPFKWGCFYAEKEMPTNTENSFVMAGHGYGLPALP AAGAAAAAGQNSNSRKALLQQSPTGSWTASHSQFAHTPPSELAMYKSHMGYQKFHRAVAY ALPAFAQTGQTPSFGEDPNLFFSVSPNIQLFTTAAAALQDKPYACELPVMLHAEEAAAPL PAEW

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India