ETH_00001930 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00001930OTHER0.9994530.0002430.000304
No Results

  • Fasta :-

    >ETH_00001930 MGGAISKIVFQPPRYPGGPPGGPPGAPDLIALKTKSGETIHAIHIKSGGSLTLLYSHGNA EDILMAFSFFKSVSAALKVDLLLYEYVGYGCSSGSPSEAGVYESVEAAFHYLTKELQIPP SSIVAYGRSLGSGPSVHLCARERVGGLILQSALLSVHRVALRLRFSLPFDLFKNINKIKK VFCPVFCIHGTNDEVVPIYHGIELYKRAPLTVSPMWVEGAGHNNLEIVAGDLFFLALSRF LRLVQQQQQQLLLQQQLQQQQQQQEEQQQPPAAVVAAAEGA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00001930.fa Sequence name : ETH_00001930 Sequence length : 281 VALUES OF COMPUTED PARAMETERS Coef20 : 2.653 CoefTot : -3.670 ChDiff : 1 ZoneTo : 27 KR : 2 DE : 0 CleavSite : 16 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.588 0.021 0.529 MesoH : -0.060 0.517 -0.231 0.301 MuHd_075 : 11.512 14.455 3.799 2.903 MuHd_095 : 27.739 18.287 7.423 6.477 MuHd_100 : 27.243 16.194 7.302 6.304 MuHd_105 : 24.438 12.729 6.756 5.779 Hmax_075 : 4.000 9.800 -0.654 2.420 Hmax_095 : 13.400 13.700 1.869 5.400 Hmax_100 : 12.800 11.500 2.057 5.260 Hmax_105 : 7.350 11.800 2.122 3.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9731 0.0269 DFMC : 0.9841 0.0159
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 281 ETH_00001930 MGGAISKIVFQPPRYPGGPPGGPPGAPDLIALKTKSGETIHAIHIKSGGSLTLLYSHGNAEDILMAFSFFKSVSAALKVD 80 LLLYEYVGYGCSSGSPSEAGVYESVEAAFHYLTKELQIPPSSIVAYGRSLGSGPSVHLCARERVGGLILQSALLSVHRVA 160 LRLRFSLPFDLFKNINKIKKVFCPVFCIHGTNDEVVPIYHGIELYKRAPLTVSPMWVEGAGHNNLEIVAGDLFFLALSRF 240 LRLVQQQQQQLLLQQQLQQQQQQQEEQQQPPAAVVAAAEGA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .P....................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00001930 7 MGGAISK|IV 0.072 . ETH_00001930 14 IVFQPPR|YP 0.103 . ETH_00001930 33 PDLIALK|TK 0.057 . ETH_00001930 35 LIALKTK|SG 0.104 . ETH_00001930 46 IHAIHIK|SG 0.094 . ETH_00001930 71 MAFSFFK|SV 0.161 . ETH_00001930 78 SVSAALK|VD 0.055 . ETH_00001930 114 AFHYLTK|EL 0.065 . ETH_00001930 128 SIVAYGR|SL 0.201 . ETH_00001930 141 SVHLCAR|ER 0.094 . ETH_00001930 143 HLCARER|VG 0.093 . ETH_00001930 158 ALLSVHR|VA 0.079 . ETH_00001930 162 VHRVALR|LR 0.072 . ETH_00001930 164 RVALRLR|FS 0.078 . ETH_00001930 173 LPFDLFK|NI 0.072 . ETH_00001930 177 LFKNINK|IK 0.057 . ETH_00001930 179 KNINKIK|KV 0.086 . ETH_00001930 180 NINKIKK|VF 0.122 . ETH_00001930 206 HGIELYK|RA 0.058 . ETH_00001930 207 GIELYKR|AP 0.137 . ETH_00001930 239 FFLALSR|FL 0.085 . ETH_00001930 242 ALSRFLR|LV 0.604 *ProP* ____________________________^_________________

  • Fasta :-

    >ETH_00001930 ATGGGGGGAGCCATTTCTAAAATTGTCTTCCAACCCCCCAGGTACCCTGGGGGCCCCCCT GGGGGCCCCCCGGGGGCCCCCGACCTTATTGCCTTGAAGACAAAAAGTGGGGAGACTATT CACGCAATTCACATCAAAAGCGGAGGCTCATTGACCCTTTTGTATTCCCACGGAAATGCT GAAGACATTTTAATGGCCTTTAGTTTTTTCAAAAGTGTTTCTGCGGCTCTTAAAGTTGAC TTGCTGCTTTACGAATACGTCGGTTACGGCTGCAGCAGCGGGAGTCCCTCGGAAGCTGGG GTTTACGAGTCTGTAGAAGCAGCTTTTCATTACCTCACAAAAGAGCTGCAAATTCCCCCC AGCAGCATCGTCGCCTACGGCAGATCCCTAGGGTCCGGGCCGAGCGTGCACCTCTGCGCG CGGGAGCGGGTGGGGGGTTTGATTCTGCAGTCGGCTCTGCTGTCTGTACACCGCGTGGCC CTGCGTCTGAGGTTTTCTCTTCCTTTTGACTTATTCAAAAACATAAATAAAATAAAAAAA GTCTTTTGTCCAGTCTTTTGCATCCACGGCACCAACGACGAGGTCGTTCCCATCTACCAC GGCATCGAGCTGTACAAGAGGGCCCCCTTGACTGTCAGCCCCATGTGGGTGGAAGGCGCT GGGCATAACAACTTGGAAATAGTAGCAGGAGATTTATTCTTTCTAGCTTTGTCTCGCTTC CTGCGGCTTGTGCAGCAGCAGCAGCAGCAGCTGTTGCTGCAGCAGCAGCTGCAGCAGCAG CAGCAGCAACAGGAAGAGCAGCAGCAGCCGCCTGCGGCGGTTGTCGCGGCGGCCGAGGGC GCCTGA
  • Download Fasta

  • Fasta :-

    MGGAISKIVFQPPRYPGGPPGGPPGAPDLIALKTKSGETIHAIHIKSGGSLTLLYSHGNA EDILMAFSFFKSVSAALKVDLLLYEYVGYGCSSGSPSEAGVYESVEAAFHYLTKELQIPP SSIVAYGRSLGSGPSVHLCARERVGGLILQSALLSVHRVALRLRFSLPFDLFKNINKIKK VFCPVFCIHGTNDEVVPIYHGIELYKRAPLTVSPMWVEGAGHNNLEIVAGDLFFLALSRF LRLVQQQQQQLLLQQQLQQQQQQQEEQQQPPAAVVAAAEGA

    No Results
No Results
No Results
IDSitePeptideScoreMethod
ETH_0000193095 SCSSGSPSEA0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India