ETH_00002175 | Proteasome subunit beta type , related

_IDPredictionOTHERSPmTPCS_Position
ETH_00002175OTHER0.9963890.0031960.000415
No Results

  • Fasta :-

    >ETH_00002175 MDTLIGLCCREFAVVAADKYSSSSIVRMKSDEDKLLQVDDDKLLALAGEPGDRSQFGEYI RKNIHLYRLRQAAAAAAAAAAAAAATGAAAGGVEAGGVEGGDVAAATGDAAAGVDAADVA VAAFVAAVAAAAAAAAAAGVAVAVTAAAAADDGDY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00002175.fa Sequence name : ETH_00002175 Sequence length : 155 VALUES OF COMPUTED PARAMETERS Coef20 : 4.114 CoefTot : 0.000 ChDiff : -10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.959 2.424 0.383 0.767 MesoH : 0.783 1.341 0.087 0.535 MuHd_075 : 10.146 8.338 5.392 1.301 MuHd_095 : 35.806 19.901 9.657 6.242 MuHd_100 : 23.545 15.156 6.823 4.971 MuHd_105 : 8.316 8.823 3.480 3.118 Hmax_075 : 3.700 17.150 3.407 4.212 Hmax_095 : 19.200 21.500 6.036 6.350 Hmax_100 : 19.200 21.500 6.134 6.350 Hmax_105 : 7.600 14.900 3.695 4.328 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9672 0.0328 DFMC : 0.9699 0.0301
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 155 ETH_00002175 MDTLIGLCCREFAVVAADKYSSSSIVRMKSDEDKLLQVDDDKLLALAGEPGDRSQFGEYIRKNIHLYRLRQAAAAAAAAA 80 AAAAATGAAAGGVEAGGVEGGDVAAATGDAAAGVDAADVAVAAFVAAVAAAAAAAAAAGVAVAVTAAAAADDGDY 160 ................................................................................ 80 ........................................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00002175 10 LIGLCCR|EF 0.077 . ETH_00002175 19 AVVAADK|YS 0.070 . ETH_00002175 27 SSSSIVR|MK 0.131 . ETH_00002175 29 SSIVRMK|SD 0.143 . ETH_00002175 34 MKSDEDK|LL 0.071 . ETH_00002175 42 LQVDDDK|LL 0.059 . ETH_00002175 53 AGEPGDR|SQ 0.091 . ETH_00002175 61 QFGEYIR|KN 0.071 . ETH_00002175 62 FGEYIRK|NI 0.071 . ETH_00002175 68 KNIHLYR|LR 0.086 . ETH_00002175 70 IHLYRLR|QA 0.089 . ____________________________^_________________

  • Fasta :-

    >ETH_00002175 ATGGACACGCTGATAGGGCTTTGCTGCCGCGAGTTTGCGGTGGTGGCAGCAGACAAGTAC AGCAGCAGCTCCATAGTCCGCATGAAAAGCGACGAAGACAAACTGCTGCAGGTCGACGAT GACAAGCTGCTGGCCCTCGCCGGAGAGCCCGGAGACAGAAGCCAGTTCGGGGAGTACATC CGCAAGAACATCCACCTCTACAGGCTCAGGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGCAACAGGTGCAGCAGCGGGAGGGGTAGAGGCGGGAGGGGTAGAGGGG GGAGACGTAGCAGCAGCGACTGGTGATGCTGCAGCGGGAGTAGATGCTGCAGATGTAGCA GTTGCAGCTTTTGTTGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGTA GCAGTAGCAGTAACAGCAGCAGCAGCAGCAGATGATGGTGATTATTAG
  • Download Fasta

  • Fasta :-

    MDTLIGLCCREFAVVAADKYSSSSIVRMKSDEDKLLQVDDDKLLALAGEPGDRSQFGEYI RKNIHLYRLRQAAAAAAAAAAAAAATGAAAGGVEAGGVEGGDVAAATGDAAAGVDAADVA VAAFVAAVAAAAAAAAAAGVAVAVTAAAAADDGDY

  • title: active site
  • coordinates: D2,D18,Y20,K34
No Results
No Results
IDSitePeptideScoreMethod
ETH_0000217530 SVRMKSDEDK0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India