ETH_00002965 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00002965SP0.0125410.9871280.000331CS pos: 28-29. VTT-AP. Pr: 0.4247
No Results

  • Fasta :-

    >ETH_00002965 MGFKFVAAALAALLALLLALRLDPGVTTAPMQHKLPQDPDGTITKVEGVERITFSVLSHG KRLHCWLFVPPQPLAKPPPAVVAAYGLGVQKDIAMVPLALALAREGFAAVLFDYRHWGVS EGLPRHAAVPQQQVEDLTALLQHLGAPGPLSSKLDSSKMALYGASLGGGVVLAAAAELCR RKDPLSSSIKAVVAAIPFVSGSKTSSKALQERGLLETARVGLAVVQDLVRSVFTAESAVY IPLARSSSSSSSSSSGISAMQLESNEHQIWASRTPLKGQVVDGAWENKLAARSLFWLSRF EVEDLAAEFLEIPTLLIAGSIDTVCPIEAIRDLVSRHQKKQSSSKMVLKEFPLRHFDFLT QQNFPILVSNTVQFIKEQI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00002965.fa Sequence name : ETH_00002965 Sequence length : 379 VALUES OF COMPUTED PARAMETERS Coef20 : 4.864 CoefTot : 0.089 ChDiff : 4 ZoneTo : 37 KR : 3 DE : 1 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.718 2.512 0.297 0.761 MesoH : -0.141 0.623 -0.233 0.301 MuHd_075 : 13.230 15.695 5.284 3.327 MuHd_095 : 15.803 13.634 4.971 4.541 MuHd_100 : 18.184 14.604 4.804 4.299 MuHd_105 : 24.092 14.240 6.478 5.295 Hmax_075 : 17.850 6.900 -1.180 1.890 Hmax_095 : 18.638 22.400 3.870 7.245 Hmax_100 : 19.100 26.000 4.263 7.320 Hmax_105 : 19.367 27.067 4.475 7.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9182 0.0818 DFMC : 0.9615 0.0385
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 379 ETH_00002965 MGFKFVAAALAALLALLLALRLDPGVTTAPMQHKLPQDPDGTITKVEGVERITFSVLSHGKRLHCWLFVPPQPLAKPPPA 80 VVAAYGLGVQKDIAMVPLALALAREGFAAVLFDYRHWGVSEGLPRHAAVPQQQVEDLTALLQHLGAPGPLSSKLDSSKMA 160 LYGASLGGGVVLAAAAELCRRKDPLSSSIKAVVAAIPFVSGSKTSSKALQERGLLETARVGLAVVQDLVRSVFTAESAVY 240 IPLARSSSSSSSSSSGISAMQLESNEHQIWASRTPLKGQVVDGAWENKLAARSLFWLSRFEVEDLAAEFLEIPTLLIAGS 320 IDTVCPIEAIRDLVSRHQKKQSSSKMVLKEFPLRHFDFLTQQNFPILVSNTVQFIKEQI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00002965 4 ---MGFK|FV 0.090 . ETH_00002965 21 ALLLALR|LD 0.064 . ETH_00002965 34 TAPMQHK|LP 0.066 . ETH_00002965 45 PDGTITK|VE 0.066 . ETH_00002965 51 KVEGVER|IT 0.103 . ETH_00002965 61 SVLSHGK|RL 0.061 . ETH_00002965 62 VLSHGKR|LH 0.148 . ETH_00002965 76 PPQPLAK|PP 0.068 . ETH_00002965 91 YGLGVQK|DI 0.069 . ETH_00002965 104 LALALAR|EG 0.085 . ETH_00002965 115 AVLFDYR|HW 0.102 . ETH_00002965 125 VSEGLPR|HA 0.103 . ETH_00002965 153 PGPLSSK|LD 0.056 . ETH_00002965 158 SKLDSSK|MA 0.068 . ETH_00002965 180 AAAELCR|RK 0.076 . ETH_00002965 181 AAELCRR|KD 0.078 . ETH_00002965 182 AELCRRK|DP 0.067 . ETH_00002965 190 PLSSSIK|AV 0.096 . ETH_00002965 203 PFVSGSK|TS 0.061 . ETH_00002965 207 GSKTSSK|AL 0.069 . ETH_00002965 212 SKALQER|GL 0.101 . ETH_00002965 219 GLLETAR|VG 0.083 . ETH_00002965 230 VVQDLVR|SV 0.194 . ETH_00002965 245 VYIPLAR|SS 0.115 . ETH_00002965 273 HQIWASR|TP 0.078 . ETH_00002965 277 ASRTPLK|GQ 0.071 . ETH_00002965 288 DGAWENK|LA 0.072 . ETH_00002965 292 ENKLAAR|SL 0.135 . ETH_00002965 299 SLFWLSR|FE 0.090 . ETH_00002965 331 CPIEAIR|DL 0.077 . ETH_00002965 336 IRDLVSR|HQ 0.099 . ETH_00002965 339 LVSRHQK|KQ 0.167 . ETH_00002965 340 VSRHQKK|QS 0.140 . ETH_00002965 345 KKQSSSK|MV 0.097 . ETH_00002965 349 SSKMVLK|EF 0.061 . ETH_00002965 354 LKEFPLR|HF 0.086 . ETH_00002965 376 NTVQFIK|EQ 0.062 . ____________________________^_________________

  • Fasta :-

    >ETH_00002965 ATGGGATTTAAATTTGTGGCAGCGGCGCTCGCGGCGCTGCTGGCGCTGCTGCTGGCGCTC CGCCTCGATCCGGGTGTCACTACAGCTCCGATGCAACACAAGCTTCCGCAAGACCCCGAC GGGACCATCACAAAAGTGGAGGGAGTGGAGCGCATCACCTTCTCCGTGCTGTCCCACGGC AAACGCCTCCACTGCTGGCTCTTCGTCCCCCCGCAGCCCCTCGCGAAGCCGCCCCCTGCT GTCGTTGCTGCTTACGGCTTGGGTGTCCAGAAGGACATAGCGATGGTGCCGCTGGCGCTG GCGCTGGCGAGGGAAGGTTTTGCTGCAGTTCTGTTTGACTACAGACACTGGGGAGTCTCC GAGGGCCTCCCAAGACATGCTGCAGTGCCGCAGCAGCAAGTGGAGGACTTGACAGCTTTG CTGCAGCACTTGGGGGCCCCGGGGCCCCTCAGCAGCAAACTGGACAGCAGCAAAATGGCA CTCTACGGGGCCTCGCTCGGCGGCGGCGTCGTCTTAGCTGCTGCAGCAGAACTCTGCAGA CGCAAAGACCCCCTCAGCAGCAGCATCAAAGCTGTTGTTGCTGCCATTCCCTTCGTCAGC GGCAGCAAAACCAGCAGCAAGGCCCTCCAGGAGCGCGGGCTGCTGGAGACGGCGCGCGTG GGCCTCGCAGTGGTGCAGGACCTGGTGCGGAGTGTCTTTACAGCTGAGAGTGCGGTGTAC ATCCCTCTGGCGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCATCAGTGCGATG CAGCTGGAGAGCAACGAACACCAAATTTGGGCCTCTCGAACTCCTTTGAAAGGCCAAGTG GTCGACGGGGCCTGGGAAAACAAATTGGCGGCGAGATCGCTCTTTTGGCTTTCGCGGTTC GAAGTGGAAGACTTGGCCGCCGAATTCCTCGAAATCCCCACCCTGCTGATCGCCGGGTCC ATAGACACCGTGTGCCCCATCGAGGCCATTCGAGATCTGGTGTCTAGACACCAGAAGAAG CAAAGCAGCAGCAAAATGGTTTTGAAAGAATTCCCTTTGAGGCATTTCGATTTCCTGACG CAGCAAAACTTCCCCATCCTCGTCAGCAACACCGTCCAGTTCATCAAGGAACAGATCTGA
  • Download Fasta

  • Fasta :-

    MGFKFVAAALAALLALLLALRLDPGVTTAPMQHKLPQDPDGTITKVEGVERITFSVLSHG KRLHCWLFVPPQPLAKPPPAVVAAYGLGVQKDIAMVPLALALAREGFAAVLFDYRHWGVS EGLPRHAAVPQQQVEDLTALLQHLGAPGPLSSKLDSSKMALYGASLGGGVVLAAAAELCR RKDPLSSSIKAVVAAIPFVSGSKTSSKALQERGLLETARVGLAVVQDLVRSVFTAESAVY IPLARSSSSSSSSSSGISAMQLESNEHQIWASRTPLKGQVVDGAWENKLAARSLFWLSRF EVEDLAAEFLEIPTLLIAGSIDTVCPIEAIRDLVSRHQKKQSSSKMVLKEFPLRHFDFLT QQNFPILVSNTVQFIKEQI

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00002965156 SSKLDSSKMA0.994unspETH_00002965250 SSSSSSSSSS0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India