ETH_00006590 | 26S protease regulatory subunit 6a, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00006590OTHER0.9999920.0000040.000004
No Results

  • Fasta :-

    >ETH_00006590 MDSAEVWGEEDGVTAEVSNFSAGELRMRTSLVDSELKYFKSEANKLKFELNNMQERIKDA IEKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE LIEAIVLPMTHKERFDKIGIRPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV QMFIGDGAKMVRDAFELAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQL DGFSSDDRIKVIAATNRPDVLDPALLRSGRLDRKIELPHPNEDARERILQIHARKMTVNK ADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHEDFVQGIAAVQAKKKSSLN YFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00006590.fa Sequence name : ETH_00006590 Sequence length : 423 VALUES OF COMPUTED PARAMETERS Coef20 : 3.185 CoefTot : 0.000 ChDiff : -12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.106 -0.026 0.465 MesoH : -0.672 0.330 -0.398 0.201 MuHd_075 : 22.639 7.278 6.248 2.841 MuHd_095 : 14.123 3.244 2.813 0.660 MuHd_100 : 21.749 5.669 4.373 1.316 MuHd_105 : 23.777 9.604 4.662 2.535 Hmax_075 : 10.300 7.800 1.791 3.610 Hmax_095 : -1.500 2.888 -2.443 1.930 Hmax_100 : 3.300 6.700 -1.356 3.140 Hmax_105 : 3.300 8.633 -1.356 3.722 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9921 0.0079 DFMC : 0.9753 0.0247
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 423 ETH_00006590 MDSAEVWGEEDGVTAEVSNFSAGELRMRTSLVDSELKYFKSEANKLKFELNNMQERIKDAIEKIRLNKQLPYLVGSVVEL 80 FDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVIGLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEV 160 DERPTEEYSDVGGLDKQIQELIEAIVLPMTHKERFDKIGIRPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV 240 QMFIGDGAKMVRDAFELAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRPDV 320 LDPALLRSGRLDRKIELPHPNEDARERILQIHARKMTVNKADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQ 400 HEDFVQGIAAVQAKKKSSLNYFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00006590 26 FSAGELR|MR 0.084 . ETH_00006590 28 AGELRMR|TS 0.066 . ETH_00006590 37 LVDSELK|YF 0.055 . ETH_00006590 40 SELKYFK|SE 0.073 . ETH_00006590 45 FKSEANK|LK 0.066 . ETH_00006590 47 SEANKLK|FE 0.069 . ETH_00006590 56 LNNMQER|IK 0.137 . ETH_00006590 58 NMQERIK|DA 0.080 . ETH_00006590 63 IKDAIEK|IR 0.055 . ETH_00006590 65 DAIEKIR|LN 0.083 . ETH_00006590 68 EKIRLNK|QL 0.115 . ETH_00006590 100 TDIDLQR|KG 0.076 . ETH_00006590 101 DIDLQRK|GK 0.094 . ETH_00006590 103 DLQRKGK|CI 0.165 . ETH_00006590 108 GKCIVIK|TS 0.074 . ETH_00006590 112 VIKTSTR|QT 0.075 . ETH_00006590 129 VEADQLK|PG 0.063 . ETH_00006590 138 DLVGVNK|DS 0.073 . ETH_00006590 146 SYLVLDK|LP 0.052 . ETH_00006590 154 PAEYDAR|VK 0.076 . ETH_00006590 156 EYDARVK|AM 0.060 . ETH_00006590 163 AMEVDER|PT 0.092 . ETH_00006590 176 DVGGLDK|QI 0.063 . ETH_00006590 192 VLPMTHK|ER 0.061 . ETH_00006590 194 PMTHKER|FD 0.102 . ETH_00006590 197 HKERFDK|IG 0.119 . ETH_00006590 201 FDKIGIR|PP 0.085 . ETH_00006590 204 IGIRPPK|GV 0.221 . ETH_00006590 216 GPPGTGK|TL 0.059 . ETH_00006590 221 GKTLLAR|AC 0.099 . ETH_00006590 228 ACAAQTK|AT 0.076 . ETH_00006590 233 TKATFLK|LA 0.128 . ETH_00006590 249 FIGDGAK|MV 0.083 . ETH_00006590 252 DGAKMVR|DA 0.126 . ETH_00006590 259 DAFELAK|EK 0.065 . ETH_00006590 261 FELAKEK|AP 0.058 . ETH_00006590 277 LDAIGTK|RF 0.062 . ETH_00006590 278 DAIGTKR|FD 0.174 . ETH_00006590 287 SELSGDR|EV 0.080 . ETH_00006590 291 GDREVQR|TM 0.096 . ETH_00006590 308 GFSSDDR|IK 0.081 . ETH_00006590 310 SSDDRIK|VI 0.060 . ETH_00006590 317 VIAATNR|PD 0.072 . ETH_00006590 327 LDPALLR|SG 0.083 . ETH_00006590 330 ALLRSGR|LD 0.220 . ETH_00006590 333 RSGRLDR|KI 0.247 . ETH_00006590 334 SGRLDRK|IE 0.069 . ETH_00006590 345 HPNEDAR|ER 0.108 . ETH_00006590 347 NEDARER|IL 0.084 . ETH_00006590 354 ILQIHAR|KM 0.107 . ETH_00006590 355 LQIHARK|MT 0.086 . ETH_00006590 360 RKMTVNK|AD 0.064 . ETH_00006590 366 KADVNFR|EL 0.095 . ETH_00006590 370 NFRELAR|ST 0.158 . ETH_00006590 381 FNGAQLK|AV 0.088 . ETH_00006590 393 AGMIALR|RN 0.086 . ETH_00006590 394 GMIALRR|NA 0.212 . ETH_00006590 414 IAAVQAK|KK 0.075 . ETH_00006590 415 AAVQAKK|KS 0.093 . ETH_00006590 416 AVQAKKK|SS 0.166 . ____________________________^_________________

  • Fasta :-

    >ETH_00006590 ATGGATTCTGCAGAGGTTTGGGGAGAGGAGGACGGGGTGACCGCCGAGGTCTCTAACTTC AGCGCGGGGGAGCTCCGCATGAGGACCTCTTTGGTTGACTCAGAGCTCAAATACTTCAAA AGTGAAGCCAACAAGCTCAAGTTCGAGCTCAACAATATGCAGGAGAGAATAAAAGACGCC ATCGAGAAGATTCGACTGAACAAACAGCTACCTTATCTGGTTGGCAGCGTTGTTGAGTTG TTTGATAACGAAGAAGAGGGAGAGGATGATGGGGCTGCAACAGACATCGACTTGCAACGA AAGGGAAAGTGCATTGTTATCAAGACCTCGACAAGACAGACTGTCTTTCTGCCTGTCATT GGCCTTGTGGAGGCTGACCAGCTAAAGCCAGGCGATCTGGTTGGTGTCAACAAGGATTCT TACCTAGTGCTGGATAAGCTACCTGCTGAGTATGACGCGAGGGTGAAGGCAATGGAGGTT GATGAACGGCCCACAGAAGAATATAGTGATGTTGGGGGCCTCGACAAACAAATTCAAGAG CTCATTGAAGCCATTGTTCTCCCCATGACCCACAAGGAGCGCTTTGATAAAATCGGCATT CGGCCGCCCAAAGGAGTTTTGATGTACGGCCCTCCGGGGACGGGGAAAACGCTACTTGCT AGAGCATGCGCTGCCCAGACCAAGGCGACCTTCCTAAAACTGGCAGGACCGCAGCTCGTT CAGATGTTTATAGGCGACGGTGCAAAGATGGTTCGAGATGCCTTCGAACTGGCAAAGGAG AAAGCTCCGGCAATCATATTTATTGATGAGCTAGATGCTATTGGTACCAAGCGCTTCGAC AGCGAGTTGTCTGGTGATCGCGAAGTGCAACGAACAATGTTAGAGCTCCTCAATCAGCTT GACGGATTCAGCAGCGACGACCGCATCAAAGTTATTGCAGCGACAAATAGACCGGACGTT TTGGACCCTGCACTGCTTCGCTCCGGCCGACTTGACAGAAAGATCGAGCTGCCACATCCC AACGAAGATGCGAGGGAGCGCATCTTGCAGATTCATGCAAGAAAGATGACCGTCAACAAG GCTGATGTGAACTTCCGGGAGCTCGCTAGAAGTACGGACGACTTTAACGGCGCGCAGCTT AAAGCTGTTTGCGTTGAAGCTGGCATGATTGCCCTCCGCCGGAACGCGTCCGAGCTACAG CACGAGGATTTCGTGCAGGGGATCGCTGCCGTACAAGCTAAAAAGAAGTCGAGCCTAAAT TACTTTACCTGA
  • Download Fasta

  • Fasta :-

    MDSAEVWGEEDGVTAEVSNFSAGELRMRTSLVDSELKYFKSEANKLKFELNNMQERIKDA IEKIRLNKQLPYLVGSVVELFDNEEEGEDDGAATDIDLQRKGKCIVIKTSTRQTVFLPVI GLVEADQLKPGDLVGVNKDSYLVLDKLPAEYDARVKAMEVDERPTEEYSDVGGLDKQIQE LIEAIVLPMTHKERFDKIGIRPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLV QMFIGDGAKMVRDAFELAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQL DGFSSDDRIKVIAATNRPDVLDPALLRSGRLDRKIELPHPNEDARERILQIHARKMTVNK ADVNFRELARSTDDFNGAQLKAVCVEAGMIALRRNASELQHEDFVQGIAAVQAKKKSSLN YFT

  • title: ATP binding site
  • coordinates: P211,P212,G213,T214,G215,K216,T217,L218,D269,N316
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00006590281 SKRFDSELSG0.994unspETH_00006590281 SKRFDSELSG0.994unspETH_00006590281 SKRFDSELSG0.994unspETH_00006590371 SELARSTDDF0.991unspETH_0000659030 SRMRTSLVDS0.995unspETH_00006590110 SVIKTSTRQT0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India