ETH_00007025 | Eukaryotic translation initiation factor 3 subunit B, related

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_IDPredictionOTHERSPmTPCS_Position
ETH_00007025OTHER0.9253710.0009810.073648
No Results

  • Fasta :-

    >ETH_00007025 MLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKELCIYAMDPKDNFPDQAADEDVTPV KLLRDEKGHFSALKYPVEKFEWSPGDNIVSLWIRGSDDTPGRLILVEVPSRRELASKNVY NVKGAAMHWQGNGDFLCLRTMVFKKTGKKGRKEFSQLEIFRMREKDIPVDNLQLNDIAVQ LHWEEGPSKRFVLVVQEEGTTNQSLRFFRVADAAEGNVETNKRDTIMTHSFDIPNYMNFL KWSPFGSYFVLASLSTYGTVMFCHLNDQDKVEVLHQDEHYMCNEVRWSHCGRYLATCVVM PLVSGAQAYRFGDNTGFNIWTFQGKLLEKTKKENFYQFLWRPHPPTLLTEKQLDDIKKRM KEHSKRYEAEDERLRSEKRRAFLKQREEESEKFQQILDELEAWKMKHPKYEEWCRAQEEF DTWFEWEYKEEIIEEELDVKQEVIC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00007025.fa Sequence name : ETH_00007025 Sequence length : 445 VALUES OF COMPUTED PARAMETERS Coef20 : 3.823 CoefTot : -0.096 ChDiff : -11 ZoneTo : 15 KR : 2 DE : 0 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.706 1.394 0.272 0.549 MesoH : -0.529 0.098 -0.396 0.170 MuHd_075 : 29.534 16.035 6.498 6.067 MuHd_095 : 6.928 16.463 3.336 3.887 MuHd_100 : 11.582 10.812 0.431 2.568 MuHd_105 : 27.284 6.240 4.041 4.551 Hmax_075 : 14.817 8.400 1.370 4.095 Hmax_095 : 5.337 10.675 -0.272 3.063 Hmax_100 : 5.000 5.000 -1.891 3.060 Hmax_105 : 12.300 6.400 0.468 3.750 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4964 0.5036 DFMC : 0.6066 0.3934
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 445 ETH_00007025 MLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKELCIYAMDPKDNFPDQAADEDVTPVKLLRDEKGHFSALKYPVEKF 80 EWSPGDNIVSLWIRGSDDTPGRLILVEVPSRRELASKNVYNVKGAAMHWQGNGDFLCLRTMVFKKTGKKGRKEFSQLEIF 160 RMREKDIPVDNLQLNDIAVQLHWEEGPSKRFVLVVQEEGTTNQSLRFFRVADAAEGNVETNKRDTIMTHSFDIPNYMNFL 240 KWSPFGSYFVLASLSTYGTVMFCHLNDQDKVEVLHQDEHYMCNEVRWSHCGRYLATCVVMPLVSGAQAYRFGDNTGFNIW 320 TFQGKLLEKTKKENFYQFLWRPHPPTLLTEKQLDDIKKRMKEHSKRYEAEDERLRSEKRRAFLKQREEESEKFQQILDEL 400 EAWKMKHPKYEEWCRAQEEFDTWFEWEYKEEIIEEELDVKQEVIC 480 ................................................................................ 80 ................................................................................ 160 ................................................P............................... 240 ................................................................................ 320 ................................................................................ 400 ............................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00007025 3 ----MLR|QF 0.077 . ETH_00007025 13 TPAATPR|GT 0.131 . ETH_00007025 27 LFSHDEK|YL 0.109 . ETH_00007025 31 DEKYLAK|IG 0.069 . ETH_00007025 35 LAKIGDK|EL 0.061 . ETH_00007025 45 IYAMDPK|DN 0.077 . ETH_00007025 61 EDVTPVK|LL 0.069 . ETH_00007025 64 TPVKLLR|DE 0.115 . ETH_00007025 67 KLLRDEK|GH 0.116 . ETH_00007025 74 GHFSALK|YP 0.067 . ETH_00007025 79 LKYPVEK|FE 0.067 . ETH_00007025 94 IVSLWIR|GS 0.122 . ETH_00007025 102 SDDTPGR|LI 0.088 . ETH_00007025 111 LVEVPSR|RE 0.067 . ETH_00007025 112 VEVPSRR|EL 0.110 . ETH_00007025 117 RRELASK|NV 0.087 . ETH_00007025 123 KNVYNVK|GA 0.072 . ETH_00007025 139 GDFLCLR|TM 0.067 . ETH_00007025 144 LRTMVFK|KT 0.091 . ETH_00007025 145 RTMVFKK|TG 0.135 . ETH_00007025 148 VFKKTGK|KG 0.064 . ETH_00007025 149 FKKTGKK|GR 0.073 . ETH_00007025 151 KTGKKGR|KE 0.122 . ETH_00007025 152 TGKKGRK|EF 0.102 . ETH_00007025 161 SQLEIFR|MR 0.094 . ETH_00007025 163 LEIFRMR|EK 0.089 . ETH_00007025 165 IFRMREK|DI 0.070 . ETH_00007025 189 WEEGPSK|RF 0.057 . ETH_00007025 190 EEGPSKR|FV 0.380 . ETH_00007025 206 TTNQSLR|FF 0.145 . ETH_00007025 209 QSLRFFR|VA 0.528 *ProP* ETH_00007025 222 GNVETNK|RD 0.063 . ETH_00007025 223 NVETNKR|DT 0.171 . ETH_00007025 241 NYMNFLK|WS 0.059 . ETH_00007025 270 HLNDQDK|VE 0.061 . ETH_00007025 286 YMCNEVR|WS 0.102 . ETH_00007025 292 RWSHCGR|YL 0.185 . ETH_00007025 310 SGAQAYR|FG 0.103 . ETH_00007025 325 IWTFQGK|LL 0.068 . ETH_00007025 329 QGKLLEK|TK 0.058 . ETH_00007025 331 KLLEKTK|KE 0.059 . ETH_00007025 332 LLEKTKK|EN 0.110 . ETH_00007025 341 FYQFLWR|PH 0.089 . ETH_00007025 351 PTLLTEK|QL 0.068 . ETH_00007025 357 KQLDDIK|KR 0.053 . ETH_00007025 358 QLDDIKK|RM 0.076 . ETH_00007025 359 LDDIKKR|MK 0.252 . ETH_00007025 361 DIKKRMK|EH 0.065 . ETH_00007025 365 RMKEHSK|RY 0.069 . ETH_00007025 366 MKEHSKR|YE 0.234 . ETH_00007025 373 YEAEDER|LR 0.078 . ETH_00007025 375 AEDERLR|SE 0.071 . ETH_00007025 378 ERLRSEK|RR 0.088 . ETH_00007025 379 RLRSEKR|RA 0.212 . ETH_00007025 380 LRSEKRR|AF 0.384 . ETH_00007025 384 KRRAFLK|QR 0.072 . ETH_00007025 386 RAFLKQR|EE 0.094 . ETH_00007025 392 REEESEK|FQ 0.060 . ETH_00007025 404 DELEAWK|MK 0.062 . ETH_00007025 406 LEAWKMK|HP 0.071 . ETH_00007025 409 WKMKHPK|YE 0.100 . ETH_00007025 415 KYEEWCR|AQ 0.097 . ETH_00007025 429 WFEWEYK|EE 0.060 . ETH_00007025 440 EEELDVK|QE 0.055 . ____________________________^_________________

  • Fasta :-

    >ETH_00007025 ATGCTGCGGCAGTTCGCCACGCCCGCAGCCACTCCAAGAGGCACTGAATTTCCTCACTTT TTATTTTCTCATGATGAAAAGTACTTGGCGAAAATTGGAGACAAAGAATTGTGCATTTAC GCAATGGACCCCAAGGACAACTTCCCGGACCAGGCCGCCGACGAGGACGTTACTCCTGTG AAGTTGCTGCGAGATGAAAAAGGCCACTTCTCAGCCCTCAAGTATCCCGTCGAAAAGTTT GAATGGTCTCCAGGAGACAACATTGTTTCTTTGTGGATAAGGGGTTCTGACGACACTCCA GGGCGTTTGATCCTGGTGGAGGTGCCGAGTCGGCGGGAGCTGGCGAGCAAAAACGTGTAC AACGTGAAGGGCGCAGCCATGCACTGGCAAGGCAACGGGGACTTCTTGTGTTTGCGAACA ATGGTATTTAAAAAAACTGGAAAAAAAGGAAGAAAAGAATTCAGCCAACTCGAGATCTTC CGCATGCGCGAAAAGGACATTCCCGTCGACAACCTCCAGCTCAACGACATCGCTGTCCAG CTCCACTGGGAGGAGGGACCCAGCAAGCGGTTCGTGCTCGTCGTTCAAGAAGAAGGGACA ACCAACCAGAGCCTGCGCTTCTTCCGCGTCGCCGACGCCGCTGAAGGCAACGTGGAGACG AACAAGAGAGACACGATAATGACTCATTCTTTCGACATTCCCAACTACATGAACTTTTTA AAATGGTCTCCTTTTGGATCTTATTTTGTTTTGGCTTCTTTGAGCACTTACGGGACAGTA ATGTTTTGCCACTTGAACGACCAGGACAAAGTTGAGGTGCTGCACCAAGACGAACACTAC ATGTGCAACGAAGTCCGCTGGTCCCACTGCGGAAGGTACTTGGCCACTTGCGTGGTTATG CCTCTCGTCAGCGGCGCGCAGGCCTACAGGTTTGGAGACAACACTGGCTTCAACATCTGG ACTTTCCAGGGGAAGTTGCTGGAAAAGACCAAGAAGGAAAACTTCTACCAGTTCCTCTGG AGGCCTCACCCCCCGACTTTGCTGACGGAGAAGCAGCTCGATGACATCAAGAAGCGAATG AAGGAACACAGCAAGAGGTACGAGGCGGAGGACGAGAGACTCCGCAGCGAGAAACGCCGA GCCTTCTTGAAGCAGCGGGAAGAAGAAAGTGAAAAGTTCCAGCAGATATTGGATGAGCTT GAGGCCTGGAAGATGAAACATCCCAAGTACGAAGAATGGTGCAGAGCCCAGGAGGAATTC GACACGTGGTTTGAGTGGGAGTATAAGGAGGAGATAATAGAGGAGGAGCTGGACGTGAAG CAAGAAGTTATTTGCTAG
  • Download Fasta

  • Fasta :-

    MLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKELCIYAMDPKDNFPDQAADEDVTPV KLLRDEKGHFSALKYPVEKFEWSPGDNIVSLWIRGSDDTPGRLILVEVPSRRELASKNVY NVKGAAMHWQGNGDFLCLRTMVFKKTGKKGRKEFSQLEIFRMREKDIPVDNLQLNDIAVQ LHWEEGPSKRFVLVVQEEGTTNQSLRFFRVADAAEGNVETNKRDTIMTHSFDIPNYMNFL KWSPFGSYFVLASLSTYGTVMFCHLNDQDKVEVLHQDEHYMCNEVRWSHCGRYLATCVVM PLVSGAQAYRFGDNTGFNIWTFQGKLLEKTKKENFYQFLWRPHPPTLLTEKQLDDIKKRM KEHSKRYEAEDERLRSEKRRAFLKQREEESEKFQQILDELEAWKMKHPKYEEWCRAQEEF DTWFEWEYKEEIIEEELDVKQEVIC

  • title: WD40 repeat
  • coordinates: M237-H275
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00007025376 SERLRSEKRR0.996unspETH_00007025376 SERLRSEKRR0.996unspETH_00007025376 SERLRSEKRR0.996unspETH_0000702511 TTPAATPRGT0.99unspETH_0000702583 SKFEWSPGDN0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India