ETH_00011325 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00011325OTHER0.7956600.0049980.199342
No Results

  • Fasta :-

    >ETH_00011325 MSMTAYRPLQYRAAAGFPLGPWGRASLQGASLCTCEKLLERSEEIPSASRRFLCVSRATA LNAQQMGALLDTSHFVLLLLPPSGVTLNATEAAEIREIEKLLLDRHSTAAVAFSRETRDA AVLLERLNRDEEYDDAPARTRMLRPYLTTYTTYSQEWQPIKSVKGSTLTSWLHGQPGQDG ALPPTIVFVAHHDAFAAVPHFATGISTGGSGLITLLWLARELKKFYKQEPPAYSVAFVLA DASAMNYEGVADWIGRTDPRLLNATRYVLCLDNVASTALSLHTPKAYKDSEASRFVQMLE NSLLEEGVQMSTRTKKIAVGEKVLPFWPHEHFTRAKLIAGTLSAEQELKHLWNRSSLTDD SLNKDALVKTVRGLAEGTARFLASVEKPSTRLTFRGGEEAFDVFISSWVKFCNKTPRFFA YRNVPEYMSSPFANRIFVKSLSDEMENAGLSTELHEFDVDMGEFSFSYEPSVAIEVSETR PTFFDWLLLLGAAAYSFAIYLAIKGAMSTNILEGPSCSTAASPTSERGSPRANDSKAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00011325.fa Sequence name : ETH_00011325 Sequence length : 538 VALUES OF COMPUTED PARAMETERS Coef20 : 3.984 CoefTot : -0.308 ChDiff : -4 ZoneTo : 35 KR : 3 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.888 2.118 0.358 0.789 MesoH : 0.262 0.465 -0.225 0.331 MuHd_075 : 28.294 18.974 6.772 6.222 MuHd_095 : 24.308 12.388 4.426 4.830 MuHd_100 : 19.443 11.450 5.612 4.605 MuHd_105 : 19.858 12.931 6.670 5.150 Hmax_075 : 10.383 13.300 1.862 3.690 Hmax_095 : 10.500 8.400 0.228 4.050 Hmax_100 : 12.000 8.100 3.520 3.600 Hmax_105 : 12.950 9.567 2.485 4.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5167 0.4833 DFMC : 0.5396 0.4604
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 538 ETH_00011325 MSMTAYRPLQYRAAAGFPLGPWGRASLQGASLCTCEKLLERSEEIPSASRRFLCVSRATALNAQQMGALLDTSHFVLLLL 80 PPSGVTLNATEAAEIREIEKLLLDRHSTAAVAFSRETRDAAVLLERLNRDEEYDDAPARTRMLRPYLTTYTTYSQEWQPI 160 KSVKGSTLTSWLHGQPGQDGALPPTIVFVAHHDAFAAVPHFATGISTGGSGLITLLWLARELKKFYKQEPPAYSVAFVLA 240 DASAMNYEGVADWIGRTDPRLLNATRYVLCLDNVASTALSLHTPKAYKDSEASRFVQMLENSLLEEGVQMSTRTKKIAVG 320 EKVLPFWPHEHFTRAKLIAGTLSAEQELKHLWNRSSLTDDSLNKDALVKTVRGLAEGTARFLASVEKPSTRLTFRGGEEA 400 FDVFISSWVKFCNKTPRFFAYRNVPEYMSSPFANRIFVKSLSDEMENAGLSTELHEFDVDMGEFSFSYEPSVAIEVSETR 480 PTFFDWLLLLGAAAYSFAIYLAIKGAMSTNILEGPSCSTAASPTSERGSPRANDSKAK 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00011325 7 MSMTAYR|PL 0.085 . ETH_00011325 12 YRPLQYR|AA 0.110 . ETH_00011325 24 PLGPWGR|AS 0.095 . ETH_00011325 37 SLCTCEK|LL 0.069 . ETH_00011325 41 CEKLLER|SE 0.086 . ETH_00011325 50 EIPSASR|RF 0.059 . ETH_00011325 51 IPSASRR|FL 0.426 . ETH_00011325 57 RFLCVSR|AT 0.080 . ETH_00011325 96 TEAAEIR|EI 0.135 . ETH_00011325 100 EIREIEK|LL 0.058 . ETH_00011325 105 EKLLLDR|HS 0.083 . ETH_00011325 115 AAVAFSR|ET 0.096 . ETH_00011325 118 AFSRETR|DA 0.424 . ETH_00011325 126 AAVLLER|LN 0.083 . ETH_00011325 129 LLERLNR|DE 0.200 . ETH_00011325 139 YDDAPAR|TR 0.067 . ETH_00011325 141 DAPARTR|ML 0.108 . ETH_00011325 144 ARTRMLR|PY 0.218 . ETH_00011325 161 QEWQPIK|SV 0.112 . ETH_00011325 164 QPIKSVK|GS 0.068 . ETH_00011325 220 TLLWLAR|EL 0.092 . ETH_00011325 223 WLARELK|KF 0.156 . ETH_00011325 224 LARELKK|FY 0.134 . ETH_00011325 227 ELKKFYK|QE 0.066 . ETH_00011325 256 VADWIGR|TD 0.078 . ETH_00011325 260 IGRTDPR|LL 0.089 . ETH_00011325 266 RLLNATR|YV 0.095 . ETH_00011325 285 LSLHTPK|AY 0.076 . ETH_00011325 288 HTPKAYK|DS 0.082 . ETH_00011325 294 KDSEASR|FV 0.202 . ETH_00011325 313 GVQMSTR|TK 0.092 . ETH_00011325 315 QMSTRTK|KI 0.082 . ETH_00011325 316 MSTRTKK|IA 0.352 . ETH_00011325 322 KIAVGEK|VL 0.059 . ETH_00011325 334 PHEHFTR|AK 0.095 . ETH_00011325 336 EHFTRAK|LI 0.071 . ETH_00011325 349 SAEQELK|HL 0.059 . ETH_00011325 354 LKHLWNR|SS 0.115 . ETH_00011325 364 TDDSLNK|DA 0.067 . ETH_00011325 369 NKDALVK|TV 0.068 . ETH_00011325 372 ALVKTVR|GL 0.099 . ETH_00011325 380 LAEGTAR|FL 0.115 . ETH_00011325 387 FLASVEK|PS 0.061 . ETH_00011325 391 VEKPSTR|LT 0.101 . ETH_00011325 395 STRLTFR|GG 0.133 . ETH_00011325 410 FISSWVK|FC 0.068 . ETH_00011325 414 WVKFCNK|TP 0.051 . ETH_00011325 417 FCNKTPR|FF 0.101 . ETH_00011325 422 PRFFAYR|NV 0.129 . ETH_00011325 435 SSPFANR|IF 0.098 . ETH_00011325 439 ANRIFVK|SL 0.133 . ETH_00011325 480 IEVSETR|PT 0.072 . ETH_00011325 504 AIYLAIK|GA 0.062 . ETH_00011325 527 ASPTSER|GS 0.087 . ETH_00011325 531 SERGSPR|AN 0.129 . ETH_00011325 536 PRANDSK|AK 0.072 . ETH_00011325 538 ANDSKAK|-- 0.075 . ____________________________^_________________

  • Fasta :-

    >ETH_00011325 ATGTCTATGACGGCTTACCGACCGCTGCAATACAGAGCGGCGGCGGGCTTCCCTTTGGGG CCTTGGGGCAGGGCTTCCCTCCAGGGCGCGTCTTTGTGCACTTGTGAGAAGCTGCTCGAA AGATCTGAAGAAATCCCAAGTGCCTCCCGCCGGTTCCTTTGTGTCTCTCGAGCAACGGCG CTCAACGCTCAGCAGATGGGAGCACTGTTGGACACCTCGCACTTCGTGCTGCTGCTGCTG CCGCCTTCAGGCGTCACCCTGAACGCAACAGAGGCGGCAGAAATTAGGGAAATTGAGAAA CTATTGTTGGACAGGCACAGCACTGCTGCTGTTGCCTTTTCACGGGAGACTAGAGACGCA GCTGTTCTACTGGAGAGGCTCAATAGGGACGAAGAGTACGATGATGCCCCTGCGAGAACG CGGATGCTGCGCCCCTACTTAACGACCTACACTACTTACTCTCAGGAGTGGCAGCCTATC AAATCAGTGAAGGGCTCGACGCTGACATCGTGGCTCCATGGGCAACCTGGGCAAGACGGC GCCCTTCCGCCCACAATAGTATTTGTCGCTCATCATGATGCCTTCGCTGCCGTGCCGCAT TTCGCGACGGGCATCAGCACTGGCGGCAGTGGACTCATAACTCTTCTGTGGCTTGCTCGA GAGTTGAAAAAGTTTTACAAACAAGAACCTCCGGCATACAGCGTGGCATTTGTGTTGGCG GACGCCAGTGCAATGAACTACGAAGGGGTGGCCGATTGGATTGGCCGGACAGACCCACGT CTTTTGAACGCCACTCGATACGTGCTGTGCCTTGACAATGTGGCCTCCACCGCCCTAAGT CTTCACACACCGAAGGCATACAAGGACTCTGAAGCCTCCCGGTTTGTGCAGATGCTGGAA AACTCGCTATTAGAAGAAGGAGTGCAGATGTCCACACGAACGAAGAAAATCGCCGTAGGA GAGAAGGTGCTGCCCTTTTGGCCACATGAGCACTTCACAAGGGCTAAACTGATTGCAGGC ACTCTCTCAGCAGAGCAGGAGCTCAAACATCTGTGGAATCGAAGTTCGCTGACAGATGAC AGCCTGAACAAAGATGCCCTGGTGAAGACTGTACGAGGATTGGCAGAAGGCACTGCGCGT TTTTTGGCCAGTGTGGAGAAGCCCAGCACTCGCCTGACGTTTCGCGGCGGTGAAGAGGCG TTTGACGTCTTCATCAGCTCATGGGTTAAGTTCTGCAACAAAACTCCAAGGTTCTTCGCC TACCGGAACGTACCAGAGTACATGAGTTCGCCGTTTGCCAACCGCATTTTTGTCAAGTCC CTATCAGACGAGATGGAGAACGCGGGACTATCAACTGAGCTGCATGAGTTCGATGTCGAC ATGGGCGAATTCTCCTTTTCATACGAGCCATCAGTAGCAATTGAGGTGTCAGAAACTCGT CCCACGTTTTTTGATTGGCTGCTTCTTCTCGGAGCTGCTGCCTATTCTTTTGCCATATAT TTGGCGATCAAAGGCGCGATGTCCACCAATATACTTGAGGGTCCATCTTGTTCTACTGCT GCATCGCCAACAAGCGAGCGGGGTTCGCCTCGCGCAAACGACTCAAAAGCGAAGTGA
  • Download Fasta

  • Fasta :-

    MSMTAYRPLQYRAAAGFPLGPWGRASLQGASLCTCEKLLERSEEIPSASRRFLCVSRATA LNAQQMGALLDTSHFVLLLLPPSGVTLNATEAAEIREIEKLLLDRHSTAAVAFSRETRDA AVLLERLNRDEEYDDAPARTRMLRPYLTTYTTYSQEWQPIKSVKGSTLTSWLHGQPGQDG ALPPTIVFVAHHDAFAAVPHFATGISTGGSGLITLLWLARELKKFYKQEPPAYSVAFVLA DASAMNYEGVADWIGRTDPRLLNATRYVLCLDNVASTALSLHTPKAYKDSEASRFVQMLE NSLLEEGVQMSTRTKKIAVGEKVLPFWPHEHFTRAKLIAGTLSAEQELKHLWNRSSLTDD SLNKDALVKTVRGLAEGTARFLASVEKPSTRLTFRGGEEAFDVFISSWVKFCNKTPRFFA YRNVPEYMSSPFANRIFVKSLSDEMENAGLSTELHEFDVDMGEFSFSYEPSVAIEVSETR PTFFDWLLLLGAAAYSFAIYLAIKGAMSTNILEGPSCSTAASPTSERGSPRANDSKAK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00011325440 SIFVKSLSDE0.991unspETH_00011325440 SIFVKSLSDE0.991unspETH_00011325440 SIFVKSLSDE0.991unspETH_00011325525 SASPTSERGS0.994unspETH_00011325529 SSERGSPRAN0.998unspETH_00011325133 YRDEEYDDAP0.99unspETH_00011325154 SYTTYSQEWQ0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India