ETH_00011410 | proteasome subunit alpha type 5, putative

UniProt_ID:

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	ETH_00011410	OTHER	0.999609	0.000127	0.000264

No Results

Fasta :-
>ETH_00011410 MFTTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAIGIQTKDGVVLASERRITSCLLE PQSIQKIAEVDTHIACAMSGLIADARTLIDHARVECANHFFTFNEKMSVRSCVDAVADLA LDFSDVGSGRRKKTMSRPFGVALIVGGVDKEGPALYSADPSGTVTKYLAVAMGSAQEGAE AMLQEQYNENMSMEAAEDLALVVLRQVMEEKLNSSNVEMAALRVGETKFKQYTPDDLKEI IARLPAPSIPTATDLSSSSSS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00011410.fa Sequence name : ETH_00011410 Sequence length : 261 VALUES OF COMPUTED PARAMETERS Coef20 : 3.827 CoefTot : 0.247 ChDiff : -9 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.712 1.235 0.017 0.505 MesoH : -0.659 0.423 -0.328 0.197 MuHd_075 : 26.662 14.099 5.971 6.104 MuHd_095 : 22.134 12.159 5.895 4.715 MuHd_100 : 16.440 13.328 4.300 4.374 MuHd_105 : 11.346 13.428 3.081 4.228 Hmax_075 : 3.063 1.575 -1.476 2.135 Hmax_095 : 11.800 5.700 0.856 3.450 Hmax_100 : 3.000 3.000 -1.467 2.890 Hmax_105 : -5.775 2.400 -3.727 1.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7938 0.2062 DFMC : 0.8115 0.1885

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 261 ETH_00011410 MFTTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAIGIQTKDGVVLASERRITSCLLEPQSIQKIAEVDTHIACAMSG 80 LIADARTLIDHARVECANHFFTFNEKMSVRSCVDAVADLALDFSDVGSGRRKKTMSRPFGVALIVGGVDKEGPALYSADP 160 SGTVTKYLAVAMGSAQEGAEAMLQEQYNENMSMEAAEDLALVVLRQVMEEKLNSSNVEMAALRVGETKFKQYTPDDLKEI 240 IARLPAPSIPTATDLSSSSSS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00011410 5 --MFTTR|SE 0.121 . ETH_00011410 10 TRSEYDR|GV 0.199 . ETH_00011410 20 TFSPEGR|LF 0.104 . ETH_00011410 32 YALGAIK|LG 0.062 . ETH_00011410 43 AIGIQTK|DG 0.061 . ETH_00011410 52 VVLASER|RI 0.072 . ETH_00011410 53 VLASERR|IT 0.129 . ETH_00011410 66 EPQSIQK|IA 0.075 . ETH_00011410 86 GLIADAR|TL 0.102 . ETH_00011410 93 TLIDHAR|VE 0.100 . ETH_00011410 106 FFTFNEK|MS 0.053 . ETH_00011410 110 NEKMSVR|SC 0.141 . ETH_00011410 130 SDVGSGR|RK 0.078 . ETH_00011410 131 DVGSGRR|KK 0.105 . ETH_00011410 132 VGSGRRK|KT 0.090 . ETH_00011410 133 GSGRRKK|TM 0.354 . ETH_00011410 137 RKKTMSR|PF 0.112 . ETH_00011410 150 IVGGVDK|EG 0.059 . ETH_00011410 166 PSGTVTK|YL 0.081 . ETH_00011410 205 LALVVLR|QV 0.122 . ETH_00011410 211 RQVMEEK|LN 0.068 . ETH_00011410 223 VEMAALR|VG 0.087 . ETH_00011410 228 LRVGETK|FK 0.074 . ETH_00011410 230 VGETKFK|QY 0.063 . ETH_00011410 238 YTPDDLK|EI 0.059 . ETH_00011410 243 LKEIIAR|LP 0.098 . ____________________________^_________________

Fasta :-
>ETH_00011410 ATGTTCACTACCAGGAGCGAGTATGACCGCGGCGTCAACACCTTCTCGCCTGAGGGCCGT TTGTTTCAGGTGGAGTACGCGCTGGGCGCCATCAAACTAGGGAGCACTGCGATTGGAATT CAAACAAAAGACGGAGTTGTTTTGGCCTCCGAAAGAAGAATAACTTCTTGTCTTTTAGAG CCGCAGTCAATTCAGAAAATTGCAGAGGTGGACACCCACATAGCCTGCGCCATGAGTGGC TTGATCGCAGACGCCAGAACCCTCATAGACCACGCGCGGGTGGAATGCGCAAACCACTTT TTCACCTTCAACGAAAAAATGAGTGTCCGGAGCTGCGTGGACGCTGTGGCGGATTTGGCT CTGGACTTTTCGGATGTGGGCTCTGGGCGCCGCAAGAAAACTATGAGCCGGCCTTTTGGG GTGGCGCTGATCGTCGGGGGAGTAGACAAAGAGGGTCCGGCGCTTTATAGCGCAGATCCT TCGGGCACTGTCACGAAGTACTTGGCCGTAGCAATGGGCTCAGCGCAGGAGGGCGCAGAG GCGATGCTGCAGGAGCAGTACAACGAAAACATGTCTATGGAAGCTGCTGAAGATCTGGCC CTAGTGGTGCTGCGGCAGGTGATGGAGGAAAAGCTGAATTCAAGTAATGTGGAAATGGCG GCGCTGCGCGTGGGAGAGACGAAGTTCAAGCAGTACACCCCAGACGACCTGAAGGAAATC ATTGCCCGCCTGCCCGCGCCCAGCATTCCCACTGCAACAGACCTTTCTTCTTCATCTTCT TCTTAA
Download Fasta

Fasta :-

MFTTRSEYDRGVNTFSPEGRLFQVEYALGAIKLGSTAIGIQTKDGVVLASERRITSCLLE PQSIQKIAEVDTHIACAMSGLIADARTLIDHARVECANHFFTFNEKMSVRSCVDAVADLA LDFSDVGSGRRKKTMSRPFGVALIVGGVDKEGPALYSADPSGTVTKYLAVAMGSAQEGAE AMLQEQYNENMSMEAAEDLALVVLRQVMEEKLNSSNVEMAALRVGETKFKQYTPDDLKEI IARLPAPSIPTATDLSSSSSS

Proteasome subunits

title: active site
coordinates: S35,E51,R53,K66,S174

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	ETH_00011410	111 S	MSVRSCVDA	0.991	unsp	ETH_00011410	192 S	NENMSMEAA	0.993	unsp

ETH_00011410 | proteasome subunit alpha type 5, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India