ETH_00012925 | 26S proteasome regulatory ATPase subunit, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00012925OTHER0.9999650.0000060.000029
No Results

  • Fasta :-

    >ETH_00012925 MTNQPSAGAPQNPQEEERARALRAYVAKIKEHREWAARVKKLREETKLQSKKYEKTEDDL KALQGVGQLIGEVLRQLDSEKFIVKTSSGPRYVVGSKPKLDKSLLTAGTRVALDMTTLTV MRRLQREVDPLVFNMLHEDPGNVHYSEVGGLSEQIRQMREVVELPLTNPELFKRVGIKTP KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP ALMRPGRLDRKIEIPMPNESARIDILKIHSSKIAKSGDIDFEAICRLCDGFNGADLRNVC TEAGMFAIRADRDYVIEEDFFKAARKIAENKKLESKLDYENI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00012925.fa Sequence name : ETH_00012925 Sequence length : 402 VALUES OF COMPUTED PARAMETERS Coef20 : 3.018 CoefTot : -1.348 ChDiff : 4 ZoneTo : 14 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.729 1.076 -0.041 0.337 MesoH : -0.668 0.288 -0.376 0.177 MuHd_075 : 12.740 5.309 2.892 2.317 MuHd_095 : 18.342 8.346 4.523 4.362 MuHd_100 : 19.075 8.397 5.012 4.267 MuHd_105 : 13.645 5.954 4.123 3.035 Hmax_075 : -8.983 -7.583 -5.547 -0.105 Hmax_095 : -1.750 -5.337 -3.145 0.569 Hmax_100 : -6.000 -6.000 -4.401 0.290 Hmax_105 : -6.000 -6.000 -4.401 0.290 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9935 0.0065 DFMC : 0.9803 0.0197
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 402 ETH_00012925 MTNQPSAGAPQNPQEEERARALRAYVAKIKEHREWAARVKKLREETKLQSKKYEKTEDDLKALQGVGQLIGEVLRQLDSE 80 KFIVKTSSGPRYVVGSKPKLDKSLLTAGTRVALDMTTLTVMRRLQREVDPLVFNMLHEDPGNVHYSEVGGLSEQIRQMRE 160 VVELPLTNPELFKRVGIKTPKGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP 240 CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDPALMRPGRLDRKIEIPMPNES 320 ARIDILKIHSSKIAKSGDIDFEAICRLCDGFNGADLRNVCTEAGMFAIRADRDYVIEEDFFKAARKIAENKKLESKLDYE 400 NI 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00012925 18 NPQEEER|AR 0.072 . ETH_00012925 20 QEEERAR|AL 0.109 . ETH_00012925 23 ERARALR|AY 0.361 . ETH_00012925 28 LRAYVAK|IK 0.097 . ETH_00012925 30 AYVAKIK|EH 0.057 . ETH_00012925 33 AKIKEHR|EW 0.091 . ETH_00012925 38 HREWAAR|VK 0.089 . ETH_00012925 40 EWAARVK|KL 0.068 . ETH_00012925 41 WAARVKK|LR 0.257 . ETH_00012925 43 ARVKKLR|EE 0.106 . ETH_00012925 47 KLREETK|LQ 0.071 . ETH_00012925 51 ETKLQSK|KY 0.065 . ETH_00012925 52 TKLQSKK|YE 0.115 . ETH_00012925 55 QSKKYEK|TE 0.060 . ETH_00012925 61 KTEDDLK|AL 0.062 . ETH_00012925 75 LIGEVLR|QL 0.093 . ETH_00012925 81 RQLDSEK|FI 0.065 . ETH_00012925 85 SEKFIVK|TS 0.061 . ETH_00012925 91 KTSSGPR|YV 0.150 . ETH_00012925 97 RYVVGSK|PK 0.054 . ETH_00012925 99 VVGSKPK|LD 0.062 . ETH_00012925 102 SKPKLDK|SL 0.094 . ETH_00012925 110 LLTAGTR|VA 0.075 . ETH_00012925 122 TTLTVMR|RL 0.078 . ETH_00012925 123 TLTVMRR|LQ 0.116 . ETH_00012925 126 VMRRLQR|EV 0.440 . ETH_00012925 156 GLSEQIR|QM 0.124 . ETH_00012925 159 EQIRQMR|EV 0.312 . ETH_00012925 173 TNPELFK|RV 0.087 . ETH_00012925 174 NPELFKR|VG 0.148 . ETH_00012925 178 FKRVGIK|TP 0.067 . ETH_00012925 181 VGIKTPK|GV 0.074 . ETH_00012925 193 GPPGTGK|TL 0.060 . ETH_00012925 198 GKTLLAR|AM 0.081 . ETH_00012925 210 MSCNFMK|VV 0.091 . ETH_00012925 219 ASAIVDK|YI 0.098 . ETH_00012925 226 YIGESAR|VI 0.105 . ETH_00012925 229 ESARVIR|EM 0.320 . ETH_00012925 236 EMFGYAK|DH 0.068 . ETH_00012925 254 IDAIGGR|RF 0.101 . ETH_00012925 255 DAIGGRR|FS 0.106 . ETH_00012925 264 QGTSADR|EI 0.077 . ETH_00012925 268 ADREIQR|TL 0.106 . ETH_00012925 287 DELGQVK|II 0.059 . ETH_00012925 294 IIMATNR|PD 0.074 . ETH_00012925 304 LDPALMR|PG 0.072 . ETH_00012925 307 ALMRPGR|LD 0.293 . ETH_00012925 310 RPGRLDR|KI 0.319 . ETH_00012925 311 PGRLDRK|IE 0.072 . ETH_00012925 322 MPNESAR|ID 0.146 . ETH_00012925 327 ARIDILK|IH 0.070 . ETH_00012925 332 LKIHSSK|IA 0.075 . ETH_00012925 335 HSSKIAK|SG 0.119 . ETH_00012925 346 DFEAICR|LC 0.068 . ETH_00012925 357 FNGADLR|NV 0.133 . ETH_00012925 369 AGMFAIR|AD 0.091 . ETH_00012925 372 FAIRADR|DY 0.311 . ETH_00012925 382 IEEDFFK|AA 0.073 . ETH_00012925 385 DFFKAAR|KI 0.082 . ETH_00012925 386 FFKAARK|IA 0.092 . ETH_00012925 391 RKIAENK|KL 0.078 . ETH_00012925 392 KIAENKK|LE 0.086 . ETH_00012925 396 NKKLESK|LD 0.059 . ____________________________^_________________

  • Fasta :-

    >ETH_00012925 ATGACTAACCAGCCGAGCGCTGGGGCCCCACAAAACCCCCAAGAGGAGGAAAGGGCGCGG GCGCTGAGGGCCTACGTGGCCAAGATAAAGGAGCACAGGGAGTGGGCTGCCAGGGTCAAG AAACTGAGGGAAGAGACGAAGCTGCAGTCGAAGAAGTACGAAAAGACAGAAGATGATTTG AAGGCGCTGCAAGGCGTGGGGCAGCTCATAGGCGAAGTGCTGCGGCAGCTCGACTCCGAG AAGTTCATTGTGAAGACTTCGAGCGGCCCGCGATATGTGGTCGGCAGCAAACCGAAGCTG GACAAGTCGCTGCTCACTGCGGGGACCCGCGTGGCTCTGGACATGACGACGCTGACGGTG ATGCGGCGGCTGCAGCGGGAGGTGGACCCGCTGGTGTTCAACATGCTGCACGAAGACCCC GGGAATGTGCACTACTCGGAAGTGGGAGGTTTGAGTGAACAAATTCGGCAAATGCGAGAA GTAGTTGAGCTGCCGCTGACGAATCCCGAGCTGTTCAAGCGCGTGGGCATCAAAACCCCC AAGGGCGTGCTGCTGTACGGCCCCCCCGGCACCGGCAAGACCCTCCTCGCCAGGGCCATG GCCTCCAACATGAGCTGCAACTTCATGAAAGTCGTCGCCTCCGCAATTGTGGACAAGTAC ATCGGCGAAAGCGCCCGCGTGATTCGCGAAATGTTCGGCTACGCAAAGGACCACCAGCCC TGCATCATCTTCATGGACGAAATCGACGCCATTGGCGGCCGCAGATTCTCCCAGGGCACT TCTGCTGATCGCGAAATTCAGCGGACTCTCATGGAGCTGCTGAACCAGCTAGACGGCTTT GACGAGCTGGGGCAAGTCAAGATCATCATGGCCACCAACAGGCCCGACGTTTTGGACCCC GCGCTCATGCGCCCGGGGCGCCTCGACCGCAAAATAGAAATTCCGATGCCGAACGAAAGC GCGCGAATAGACATTTTGAAAATCCACTCCAGCAAGATTGCCAAGAGCGGCGACATAGAC TTCGAAGCAATTTGCCGTTTGTGCGACGGCTTCAACGGAGCAGATTTGCGAAATGTTTGC ACTGAGGCGGGAATGTTTGCCATCCGCGCAGACAGAGATTATGTCATTGAAGAGGACTTC TTCAAAGCCGCCAGAAAAATTGCAGAAAATAAAAAACTCGAAAGCAAACTCGACTACGAA AACATTTAA
  • Download Fasta

  • Fasta :-

    MTNQPSAGAPQNPQEEERARALRAYVAKIKEHREWAARVKKLREETKLQSKKYEKTEDDL KALQGVGQLIGEVLRQLDSEKFIVKTSSGPRYVVGSKPKLDKSLLTAGTRVALDMTTLTV MRRLQREVDPLVFNMLHEDPGNVHYSEVGGLSEQIRQMREVVELPLTNPELFKRVGIKTP KGVLLYGPPGTGKTLLARAMASNMSCNFMKVVASAIVDKYIGESARVIREMFGYAKDHQP CIIFMDEIDAIGGRRFSQGTSADREIQRTLMELLNQLDGFDELGQVKIIMATNRPDVLDP ALMRPGRLDRKIEIPMPNESARIDILKIHSSKIAKSGDIDFEAICRLCDGFNGADLRNVC TEAGMFAIRADRDYVIEEDFFKAARKIAENKKLESKLDYENI

  • title: ATP binding site
  • coordinates: P188,P189,G190,T191,G192,K193,T194,L195,D246,N293
No Results
No Results
IDSitePeptideScoreMethod
ETH_00012925257 SGRRFSQGTS0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India