ETH_00013695 | eukaryotic translation initiation factor 3 subunit 5, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

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_IDPredictionOTHERSPmTPCS_Position
ETH_00013695OTHER0.9575890.0020830.040328
No Results

  • Fasta :-

    >ETH_00013695 MSRRVSLLGANNQKPACVPKNFDLLPFPSLRVRLHPVPLMTILDAYIRRDEGQENVIGTL LGSCSDGNIIDVTDCFVDRHSLTGEGLLQIIKDHHESMFELKQQANGGNGGVREVVVGWF CTGSEMTELTCAVHGWFKQFSSVSKFFPQPPLTEPIHLMVDAVMESESFSVKVYTQVQMT MAREACFQFHELPLELYATPSDRVGLQLLQKVRTAHRSHPPRAEDLTEPASEGVLLDDIT DGLNAELEQLQEKLEICAAYVRRVLNGEVEPDPEVGRFLSSALSGATEPDLEAFEQLCQN TLQDSLMAAHLARLAKLQFAVAQKLNTSFF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00013695.fa Sequence name : ETH_00013695 Sequence length : 330 VALUES OF COMPUTED PARAMETERS Coef20 : 4.054 CoefTot : -0.894 ChDiff : -16 ZoneTo : 43 KR : 6 DE : 1 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.165 0.068 0.432 MesoH : -0.119 0.258 -0.354 0.234 MuHd_075 : 24.450 13.643 5.409 4.171 MuHd_095 : 26.133 12.745 7.081 4.514 MuHd_100 : 25.546 11.921 5.847 4.920 MuHd_105 : 23.614 11.375 5.146 5.594 Hmax_075 : 3.733 10.100 1.302 1.773 Hmax_095 : 12.100 13.200 2.191 4.560 Hmax_100 : 11.900 8.700 2.055 4.560 Hmax_105 : 3.267 4.700 2.242 3.220 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7818 0.2182 DFMC : 0.6892 0.3108
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 330 ETH_00013695 MSRRVSLLGANNQKPACVPKNFDLLPFPSLRVRLHPVPLMTILDAYIRRDEGQENVIGTLLGSCSDGNIIDVTDCFVDRH 80 SLTGEGLLQIIKDHHESMFELKQQANGGNGGVREVVVGWFCTGSEMTELTCAVHGWFKQFSSVSKFFPQPPLTEPIHLMV 160 DAVMESESFSVKVYTQVQMTMAREACFQFHELPLELYATPSDRVGLQLLQKVRTAHRSHPPRAEDLTEPASEGVLLDDIT 240 DGLNAELEQLQEKLEICAAYVRRVLNGEVEPDPEVGRFLSSALSGATEPDLEAFEQLCQNTLQDSLMAAHLARLAKLQFA 320 VAQKLNTSFF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00013695 3 ----MSR|RV 0.101 . ETH_00013695 4 ---MSRR|VS 0.113 . ETH_00013695 14 LGANNQK|PA 0.066 . ETH_00013695 20 KPACVPK|NF 0.074 . ETH_00013695 31 LPFPSLR|VR 0.070 . ETH_00013695 33 FPSLRVR|LH 0.089 . ETH_00013695 48 ILDAYIR|RD 0.090 . ETH_00013695 49 LDAYIRR|DE 0.258 . ETH_00013695 79 TDCFVDR|HS 0.117 . ETH_00013695 92 GLLQIIK|DH 0.063 . ETH_00013695 102 ESMFELK|QQ 0.077 . ETH_00013695 113 GGNGGVR|EV 0.123 . ETH_00013695 138 AVHGWFK|QF 0.067 . ETH_00013695 145 QFSSVSK|FF 0.077 . ETH_00013695 172 SESFSVK|VY 0.092 . ETH_00013695 183 VQMTMAR|EA 0.135 . ETH_00013695 203 YATPSDR|VG 0.072 . ETH_00013695 211 GLQLLQK|VR 0.060 . ETH_00013695 213 QLLQKVR|TA 0.099 . ETH_00013695 217 KVRTAHR|SH 0.094 . ETH_00013695 222 HRSHPPR|AE 0.193 . ETH_00013695 253 LEQLQEK|LE 0.056 . ETH_00013695 262 ICAAYVR|RV 0.103 . ETH_00013695 263 CAAYVRR|VL 0.164 . ETH_00013695 277 PDPEVGR|FL 0.126 . ETH_00013695 313 MAAHLAR|LA 0.123 . ETH_00013695 316 HLARLAK|LQ 0.141 . ETH_00013695 324 QFAVAQK|LN 0.059 . ____________________________^_________________

  • Fasta :-

    >ETH_00013695 ATGTCGCGCCGGGTTTCCCTCTTAGGGGCCAATAACCAGAAGCCGGCATGCGTGCCGAAG AACTTTGACTTGTTACCATTCCCATCTCTACGGGTGCGGCTGCATCCTGTGCCTCTTATG ACCATTCTGGACGCGTACATTCGCCGCGATGAAGGCCAGGAGAACGTCATTGGCACTTTG CTTGGCTCATGCTCCGATGGAAACATCATTGATGTCACAGATTGCTTCGTGGACAGGCAT TCTTTGACTGGCGAGGGCCTGCTGCAAATTATCAAGGACCATCACGAGAGCATGTTTGAG CTGAAACAGCAGGCTAATGGAGGCAATGGCGGAGTGCGGGAAGTAGTTGTTGGCTGGTTC TGCACAGGGAGTGAAATGACAGAGCTGACTTGCGCTGTCCACGGCTGGTTCAAACAGTTC TCGTCTGTGTCCAAGTTCTTCCCCCAGCCGCCGCTCACAGAGCCCATCCACTTGATGGTT GATGCCGTCATGGAGAGCGAGAGCTTTTCAGTGAAGGTCTACACACAGGTCCAGATGACA ATGGCCAGAGAGGCTTGCTTTCAATTCCATGAGCTTCCCTTGGAGCTGTACGCGACTCCG TCAGACCGAGTGGGTCTGCAGCTGTTGCAAAAGGTGCGCACTGCGCACCGGAGTCATCCC CCGCGAGCAGAAGACTTGACAGAGCCGGCGTCCGAAGGCGTTTTGCTAGATGACATCACC GACGGCCTCAACGCCGAACTTGAACAACTCCAGGAGAAACTCGAGATCTGCGCGGCCTAT GTACGAAGAGTGTTGAATGGCGAGGTTGAACCCGACCCAGAGGTTGGCCGTTTCCTGAGT TCTGCTTTGAGCGGCGCTACGGAACCTGATTTGGAAGCTTTCGAGCAGCTCTGCCAGAAC ACACTGCAGGACAGCCTTATGGCTGCTCACTTGGCGCGGTTGGCAAAGCTGCAGTTCGCT GTGGCGCAGAAGCTCAACACTTCATTCTTCTGA
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  • Fasta :-

    MSRRVSLLGANNQKPACVPKNFDLLPFPSLRVRLHPVPLMTILDAYIRRDEGQENVIGTL LGSCSDGNIIDVTDCFVDRHSLTGEGLLQIIKDHHESMFELKQQANGGNGGVREVVVGWF CTGSEMTELTCAVHGWFKQFSSVSKFFPQPPLTEPIHLMVDAVMESESFSVKVYTQVQMT MAREACFQFHELPLELYATPSDRVGLQLLQKVRTAHRSHPPRAEDLTEPASEGVLLDDIT DGLNAELEQLQEKLEICAAYVRRVLNGEVEPDPEVGRFLSSALSGATEPDLEAFEQLCQN TLQDSLMAAHLARLAKLQFAVAQKLNTSFF

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IDSitePeptideScoreMethod
ETH_0001369581 SVDRHSLTGE0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India