ETH_00013740 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00013740mTP0.1828790.0878100.729311CS pos: 31-32. PAC-SS. Pr: 0.1922
No Results

  • Fasta :-

    >ETH_00013740 MFLFAAGVTLRLVAAHGWRPRLAIFWAAPACSSSSSSSSSSCSCSSSRAAEQQCPPSSLL LHLLEHPMPGGLMDTLIRKGLIYEGFALSHATSRSFILGLYLKLTAAGQQQSAAVLQLVR RFVLLLQQQIDAAFISSHFEGLGALSRALWGALDPLDPLQQVTAAAEATLLLPSRPDIAL NTGLCLQPLQQQQQLAAVKQLLHALVNGKQVTVFLGPQGPPGGPQGPGGPQQGQQGASQG APLAATGSPAASGGAPYEEAAVAEEGGPQEAAAAEDRGPTAAGGPPAAAGGAPGALRELP EYGVQYYVEPTEEAAAAAAATEAAATGTAAAATAADDVGDEGSSLGAPLSVPGPLACKVP EEGPVKPHPVPAVCAAAAAAATQLPSLGAFSPAAAAAAAAAAAGGPPGPCVLLADENLTI LWHNGAPFGKPLVRASVRARVAAAAATAANDAFAKMFVSIFSKKIKSKLSHFHGCGVELL VAFTAGSLVFEIQASQQQQQQQQRQHSSSSSSSTAAAAAAAAAAVAAAAAAAAPAAATAL SPMFEEIFKGVGEAFQQTLENITETEFEQALQELLEETQDFAASSAYELALDLSLSLLRQ SRFSQFDLLQQLQQLQQQQQQQQQGGGFAAFKAFLSSSFTRTAVDCFIMGDVAAAAAKDL ALQFVQQIRSSTIPYEEAAAAKTARLGGDVELVLKNPIPGDSNSVYLSLFVFEGPDVLQQ LLLAAAAQLLREPFFEELRTENKDGYVAAAELLQLAPAAAIATIVQTSSRGLPPSCLLGS FALRSRK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00013740.fa Sequence name : ETH_00013740 Sequence length : 787 VALUES OF COMPUTED PARAMETERS Coef20 : 4.467 CoefTot : 2.307 ChDiff : -19 ZoneTo : 64 KR : 4 DE : 1 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.659 1.941 0.298 0.648 MesoH : 0.636 0.794 -0.015 0.414 MuHd_075 : 28.935 24.460 9.686 7.299 MuHd_095 : 25.409 12.822 6.573 5.287 MuHd_100 : 25.351 17.271 7.754 5.106 MuHd_105 : 25.715 18.049 7.868 5.463 Hmax_075 : 15.300 16.700 4.090 5.052 Hmax_095 : 15.750 3.600 3.403 6.151 Hmax_100 : 11.000 11.400 2.962 3.510 Hmax_105 : 7.963 9.450 1.654 3.722 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6596 0.3404 DFMC : 0.2163 0.7837 This protein is probably imported in chloroplast. f(Ser) = 0.2500 f(Arg) = 0.0625 CMi = 1.58730 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 787 ETH_00013740 MFLFAAGVTLRLVAAHGWRPRLAIFWAAPACSSSSSSSSSSCSCSSSRAAEQQCPPSSLLLHLLEHPMPGGLMDTLIRKG 80 LIYEGFALSHATSRSFILGLYLKLTAAGQQQSAAVLQLVRRFVLLLQQQIDAAFISSHFEGLGALSRALWGALDPLDPLQ 160 QVTAAAEATLLLPSRPDIALNTGLCLQPLQQQQQLAAVKQLLHALVNGKQVTVFLGPQGPPGGPQGPGGPQQGQQGASQG 240 APLAATGSPAASGGAPYEEAAVAEEGGPQEAAAAEDRGPTAAGGPPAAAGGAPGALRELPEYGVQYYVEPTEEAAAAAAA 320 TEAAATGTAAAATAADDVGDEGSSLGAPLSVPGPLACKVPEEGPVKPHPVPAVCAAAAAAATQLPSLGAFSPAAAAAAAA 400 AAAGGPPGPCVLLADENLTILWHNGAPFGKPLVRASVRARVAAAAATAANDAFAKMFVSIFSKKIKSKLSHFHGCGVELL 480 VAFTAGSLVFEIQASQQQQQQQQRQHSSSSSSSTAAAAAAAAAAVAAAAAAAAPAAATALSPMFEEIFKGVGEAFQQTLE 560 NITETEFEQALQELLEETQDFAASSAYELALDLSLSLLRQSRFSQFDLLQQLQQLQQQQQQQQQGGGFAAFKAFLSSSFT 640 RTAVDCFIMGDVAAAAAKDLALQFVQQIRSSTIPYEEAAAAKTARLGGDVELVLKNPIPGDSNSVYLSLFVFEGPDVLQQ 720 LLLAAAAQLLREPFFEELRTENKDGYVAAAELLQLAPAAAIATIVQTSSRGLPPSCLLGSFALRSRK 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00013740 11 AAGVTLR|LV 0.114 . ETH_00013740 19 VAAHGWR|PR 0.084 . ETH_00013740 21 AHGWRPR|LA 0.088 . ETH_00013740 48 CSCSSSR|AA 0.149 . ETH_00013740 78 LMDTLIR|KG 0.070 . ETH_00013740 79 MDTLIRK|GL 0.085 . ETH_00013740 94 LSHATSR|SF 0.146 . ETH_00013740 103 ILGLYLK|LT 0.066 . ETH_00013740 120 AVLQLVR|RF 0.062 . ETH_00013740 121 VLQLVRR|FV 0.194 . ETH_00013740 147 GLGALSR|AL 0.108 . ETH_00013740 175 TLLLPSR|PD 0.084 . ETH_00013740 199 QQLAAVK|QL 0.066 . ETH_00013740 209 HALVNGK|QV 0.076 . ETH_00013740 277 AAAAEDR|GP 0.104 . ETH_00013740 297 GAPGALR|EL 0.085 . ETH_00013740 358 PGPLACK|VP 0.054 . ETH_00013740 366 PEEGPVK|PH 0.053 . ETH_00013740 430 NGAPFGK|PL 0.064 . ETH_00013740 434 FGKPLVR|AS 0.084 . ETH_00013740 438 LVRASVR|AR 0.086 . ETH_00013740 440 RASVRAR|VA 0.167 . ETH_00013740 455 ANDAFAK|MF 0.066 . ETH_00013740 463 FVSIFSK|KI 0.075 . ETH_00013740 464 VSIFSKK|IK 0.108 . ETH_00013740 466 IFSKKIK|SK 0.108 . ETH_00013740 468 SKKIKSK|LS 0.078 . ETH_00013740 504 QQQQQQR|QH 0.100 . ETH_00013740 549 MFEEIFK|GV 0.103 . ETH_00013740 599 LSLSLLR|QS 0.075 . ETH_00013740 602 SLLRQSR|FS 0.207 . ETH_00013740 632 GGFAAFK|AF 0.061 . ETH_00013740 641 LSSSFTR|TA 0.160 . ETH_00013740 658 VAAAAAK|DL 0.081 . ETH_00013740 669 QFVQQIR|SS 0.100 . ETH_00013740 682 EEAAAAK|TA 0.080 . ETH_00013740 685 AAAKTAR|LG 0.162 . ETH_00013740 695 DVELVLK|NP 0.057 . ETH_00013740 731 AAAQLLR|EP 0.072 . ETH_00013740 739 PFFEELR|TE 0.063 . ETH_00013740 743 ELRTENK|DG 0.066 . ETH_00013740 770 IVQTSSR|GL 0.096 . ETH_00013740 784 LGSFALR|SR 0.115 . ETH_00013740 786 SFALRSR|K- 0.085 . ETH_00013740 787 FALRSRK|-- 0.193 . ____________________________^_________________

  • Fasta :-

    >ETH_00013740 ATGTTCCTTTTTGCTGCAGGAGTTACCCTGCGGCTGGTGGCTGCCCACGGCTGGCGGCCT CGCCTGGCGATCTTCTGGGCAGCCCCGGCCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCTGCAGCTGCAGCAGCAGCAGGGCAGCAGAGCAGCAGTGCCCGCCTTCTTCGCTGCTG CTGCACCTTCTGGAACACCCAATGCCTGGGGGACTTATGGACACTCTCATACGCAAAGGT TTGATTTATGAGGGCTTTGCGCTGTCGCATGCAACTTCTCGGAGTTTCATTTTGGGGCTT TATTTGAAGTTAACTGCTGCTGGGCAGCAGCAATCTGCTGCAGTGCTGCAGCTGGTGCGG CGCTTCGTGCTGCTGCTGCAGCAGCAAATCGATGCTGCCTTCATCAGCAGCCACTTCGAA GGCTTGGGGGCCCTCAGCAGGGCCCTCTGGGGGGCCCTGGACCCTCTGGACCCGCTGCAG CAAGTAACAGCAGCAGCAGAAGCAACTTTGCTGCTGCCTTCTCGCCCAGACATAGCCCTC AACACTGGCCTTTGTCTCCAGCCGCTGCAGCAGCAGCAGCAGCTTGCTGCTGTCAAGCAG CTGCTGCATGCGCTCGTCAACGGCAAACAAGTTACTGTCTTCTTGGGGCCCCAGGGGCCC CCCGGGGGCCCCCAGGGGCCCGGGGGCCCCCAGCAAGGGCAGCAGGGGGCCTCCCAGGGG GCCCCCCTAGCAGCAACAGGTTCCCCAGCAGCTTCGGGGGGGGCCCCCTACGAAGAAGCA GCAGTAGCAGAAGAGGGGGGCCCCCAAGAAGCAGCAGCAGCAGAAGACAGGGGGCCCACA GCAGCAGGAGGGCCCCCTGCAGCTGCAGGGGGGGCCCCCGGGGCCCTTCGGGAGCTGCCG GAGTATGGGGTACAGTACTACGTGGAGCCGACTGAAGAAGCAGCAGCAGCAGCAGCAGCA ACAGAAGCAGCAGCAACAGGAACAGCAGCAGCAGCAACAGCAGCAGACGATGTCGGTGAT GAGGGGAGCTCCCTGGGGGCCCCCCTTTCTGTGCCGGGGCCCCTTGCATGCAAAGTCCCC GAAGAAGGCCCTGTGAAGCCGCACCCAGTGCCGGCAGTTTGTGCTGCTGCTGCTGCTGCT GCTACGCAGCTGCCGTCGCTGGGGGCCTTCTCCCCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCAGCCGGGGGGCCCCCAGGGCCCTGCGTGCTGCTGGCCGATGAAAACTTGACCATC TTGTGGCACAATGGGGCCCCCTTCGGGAAGCCCCTGGTGAGGGCCTCGGTGCGGGCGCGA GTTGCTGCTGCAGCAGCAACAGCAGCAAATGATGCTTTTGCAAAAATGTTTGTTTCCATC TTTTCCAAAAAAATAAAATCCAAACTGAGTCATTTCCATGGCTGCGGAGTTGAACTCCTC GTGGCCTTCACTGCAGGCAGCCTCGTCTTCGAAATCCAGGCAAGCCAGCAGCAGCAGCAG CAGCAGCAGCGGCAGCACAGCAGCAGCAGCAGCAGCAGCACAGCAGCAGCGGCAGCAGCA GCGGCAGCAGCGGTAGCAGCAGCAGCAGCGGCAGCAGCACCAGCAGCAGCAACAGCTTTG AGCCCCATGTTTGAAGAGATCTTCAAAGGAGTCGGAGAAGCTTTTCAACAAACTTTGGAA AACATCACAGAGACAGAGTTCGAGCAGGCCTTGCAAGAGCTGCTGGAAGAGACACAAGAC TTCGCAGCTTCCAGCGCCTACGAATTGGCTTTGGATTTATCTCTTTCGCTGCTGCGGCAG AGCCGCTTCAGCCAGTTTGATTTGCTGCAGCAGCTGCAGCAGCTGCAGCAGCAGCAGCAG CAGCAGCAGCAAGGGGGGGGATTTGCGGCGTTCAAGGCCTTTCTCAGCAGCAGCTTCACT CGCACTGCAGTGGATTGCTTCATCATGGGAGATGTTGCTGCAGCAGCAGCAAAAGATTTG GCGCTGCAGTTCGTGCAGCAGATCCGCAGCAGCACAATTCCCTACGAAGAAGCAGCAGCA GCAAAGACGGCGAGGCTGGGGGGCGACGTGGAGTTGGTTTTGAAAAACCCGATCCCAGGA GACAGCAACTCCGTCTATTTGTCTCTCTTTGTGTTTGAGGGGCCCGACGTGCTGCAGCAG CTGCTGCTTGCTGCTGCAGCACAGCTGCTGCGGGAGCCTTTCTTCGAAGAGTTAAGAACG GAAAACAAAGATGGATATGTTGCAGCAGCAGAGCTGCTGCAGCTGGCTCCTGCTGCTGCT ATTGCCACTATTGTCCAGACTTCTTCGAGGGGGTTGCCTCCCAGTTGTCTTCTCGGAAGC TTTGCTTTACGGAGCCGCAAGTGA
  • Download Fasta

  • Fasta :-

    MFLFAAGVTLRLVAAHGWRPRLAIFWAAPACSSSSSSSSSSCSCSSSRAAEQQCPPSSLL LHLLEHPMPGGLMDTLIRKGLIYEGFALSHATSRSFILGLYLKLTAAGQQQSAAVLQLVR RFVLLLQQQIDAAFISSHFEGLGALSRALWGALDPLDPLQQVTAAAEATLLLPSRPDIAL NTGLCLQPLQQQQQLAAVKQLLHALVNGKQVTVFLGPQGPPGGPQGPGGPQQGQQGASQG APLAATGSPAASGGAPYEEAAVAEEGGPQEAAAAEDRGPTAAGGPPAAAGGAPGALRELP EYGVQYYVEPTEEAAAAAAATEAAATGTAAAATAADDVGDEGSSLGAPLSVPGPLACKVP EEGPVKPHPVPAVCAAAAAAATQLPSLGAFSPAAAAAAAAAAAGGPPGPCVLLADENLTI LWHNGAPFGKPLVRASVRARVAAAAATAANDAFAKMFVSIFSKKIKSKLSHFHGCGVELL VAFTAGSLVFEIQASQQQQQQQQRQHSSSSSSSTAAAAAAAAAAVAAAAAAAAPAAATAL SPMFEEIFKGVGEAFQQTLENITETEFEQALQELLEETQDFAASSAYELALDLSLSLLRQ SRFSQFDLLQQLQQLQQQQQQQQQGGGFAAFKAFLSSSFTRTAVDCFIMGDVAAAAAKDL ALQFVQQIRSSTIPYEEAAAAKTARLGGDVELVLKNPIPGDSNSVYLSLFVFEGPDVLQQ LLLAAAAQLLREPFFEELRTENKDGYVAAAELLQLAPAAAIATIVQTSSRGLPPSCLLGS FALRSRK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00013740507 SQRQHSSSSS0.994unspETH_00013740507 SQRQHSSSSS0.994unspETH_00013740507 SQRQHSSSSS0.994unspETH_00013740604 SQSRFSQFDL0.998unspETH_0001374037 SSSSSSSSSS0.991unspETH_0001374039 SSSSSSSSCS0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India