ETH_00015775 | 26S proteasome subunit 4, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00015775OTHER0.9999920.0000010.000007
No Results

  • Fasta :-

    >ETH_00015775 MGNAHGGFNLPGHPGGNDDKKDKKKEKKPLEAAPPSHVGRRKKPKGAMGASKLPNVTPVT KCRMRLLKLERVKDYLLLEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEELI DEQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKV EKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPEFFEDIGIAPPKGVILYGPPGTGKTLLA KAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAKENAPSIVFIDEIDAVGTKRYD ATSGGEKEIQRTMLELLNQLDGFEARGDVKVILATNRIESLDPALIRPGRIDRKIQLPNP DTKTKRKIFQIHTSRMTMADDVDLEEFVMAKDELSGADIKAICTEAGMLALRERRMKITQ DDLRQAKEKALYRKKGDIPEGLYL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00015775.fa Sequence name : ETH_00015775 Sequence length : 444 VALUES OF COMPUTED PARAMETERS Coef20 : 1.752 CoefTot : -2.623 ChDiff : -7 ZoneTo : 17 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.659 1.218 -0.006 0.484 MesoH : -0.639 0.390 -0.368 0.248 MuHd_075 : 22.775 10.315 7.344 3.737 MuHd_095 : 17.113 10.289 5.807 2.868 MuHd_100 : 14.796 9.580 4.378 2.834 MuHd_105 : 7.198 6.756 2.251 2.023 Hmax_075 : 5.833 0.117 -1.315 2.823 Hmax_095 : 11.500 3.700 0.883 4.020 Hmax_100 : 8.700 2.100 -0.879 3.500 Hmax_105 : 2.300 -0.600 -1.798 2.415 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9977 0.0023 DFMC : 0.9959 0.0041
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 444 ETH_00015775 MGNAHGGFNLPGHPGGNDDKKDKKKEKKPLEAAPPSHVGRRKKPKGAMGASKLPNVTPVTKCRMRLLKLERVKDYLLLEE 80 EYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEELIDEQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKT 160 SSIVGILSDEVDPLISVMKVEKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPEFFEDIGIAPPKGVILYGPPGTGKTLLA 240 KAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAKENAPSIVFIDEIDAVGTKRYDATSGGEKEIQRTMLELLNQL 320 DGFEARGDVKVILATNRIESLDPALIRPGRIDRKIQLPNPDTKTKRKIFQIHTSRMTMADDVDLEEFVMAKDELSGADIK 400 AICTEAGMLALRERRMKITQDDLRQAKEKALYRKKGDIPEGLYL 480 ..........................................P..................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00015775 20 PGGNDDK|KD 0.061 . ETH_00015775 21 GGNDDKK|DK 0.152 . ETH_00015775 23 NDDKKDK|KK 0.068 . ETH_00015775 24 DDKKDKK|KE 0.083 . ETH_00015775 25 DKKDKKK|EK 0.133 . ETH_00015775 27 KDKKKEK|KP 0.064 . ETH_00015775 28 DKKKEKK|PL 0.169 . ETH_00015775 40 PPSHVGR|RK 0.164 . ETH_00015775 41 PSHVGRR|KK 0.188 . ETH_00015775 42 SHVGRRK|KP 0.091 . ETH_00015775 43 HVGRRKK|PK 0.519 *ProP* ETH_00015775 45 GRRKKPK|GA 0.142 . ETH_00015775 52 GAMGASK|LP 0.065 . ETH_00015775 61 NVTPVTK|CR 0.058 . ETH_00015775 63 TPVTKCR|MR 0.097 . ETH_00015775 65 VTKCRMR|LL 0.073 . ETH_00015775 68 CRMRLLK|LE 0.108 . ETH_00015775 71 RLLKLER|VK 0.074 . ETH_00015775 73 LKLERVK|DY 0.064 . ETH_00015775 90 SNQEQHK|PA 0.079 . ETH_00015775 95 HKPAEER|NE 0.091 . ETH_00015775 102 NEEEVSR|VD 0.075 . ETH_00015775 107 SRVDELR|GS 0.109 . ETH_00015775 145 ILSFVDK|DL 0.094 . ETH_00015775 159 SVLLHNK|TS 0.062 . ETH_00015775 179 PLISVMK|VE 0.061 . ETH_00015775 182 SVMKVEK|AP 0.059 . ETH_00015775 196 DIGGLEK|QI 0.065 . ETH_00015775 202 KQIQEVK|EA 0.061 . ETH_00015775 224 IGIAPPK|GV 0.090 . ETH_00015775 236 GPPGTGK|TL 0.061 . ETH_00015775 241 GKTLLAK|AV 0.077 . ETH_00015775 253 TSATFLR|VV 0.199 . ETH_00015775 262 GSELIQK|YL 0.086 . ETH_00015775 269 YLGDGPK|LV 0.073 . ETH_00015775 272 DGPKLVR|EM 0.070 . ETH_00015775 276 LVREMFK|LA 0.075 . ETH_00015775 279 EMFKLAK|EN 0.065 . ETH_00015775 297 IDAVGTK|RY 0.061 . ETH_00015775 298 DAVGTKR|YD 0.177 . ETH_00015775 307 ATSGGEK|EI 0.062 . ETH_00015775 311 GEKEIQR|TM 0.080 . ETH_00015775 326 LDGFEAR|GD 0.125 . ETH_00015775 330 EARGDVK|VI 0.060 . ETH_00015775 337 VILATNR|IE 0.069 . ETH_00015775 347 LDPALIR|PG 0.079 . ETH_00015775 350 ALIRPGR|ID 0.232 . ETH_00015775 353 RPGRIDR|KI 0.193 . ETH_00015775 354 PGRIDRK|IQ 0.077 . ETH_00015775 363 LPNPDTK|TK 0.077 . ETH_00015775 365 NPDTKTK|RK 0.072 . ETH_00015775 366 PDTKTKR|KI 0.242 . ETH_00015775 367 DTKTKRK|IF 0.086 . ETH_00015775 375 FQIHTSR|MT 0.087 . ETH_00015775 391 EEFVMAK|DE 0.065 . ETH_00015775 400 LSGADIK|AI 0.074 . ETH_00015775 412 AGMLALR|ER 0.073 . ETH_00015775 414 MLALRER|RM 0.087 . ETH_00015775 415 LALRERR|MK 0.407 . ETH_00015775 417 LRERRMK|IT 0.190 . ETH_00015775 424 ITQDDLR|QA 0.083 . ETH_00015775 427 DDLRQAK|EK 0.096 . ETH_00015775 429 LRQAKEK|AL 0.089 . ETH_00015775 433 KEKALYR|KK 0.114 . ETH_00015775 434 EKALYRK|KG 0.087 . ETH_00015775 435 KALYRKK|GD 0.098 . ____________________________^_________________

  • Fasta :-

    >ETH_00015775 ATGGGGAATGCCCATGGGGGCTTCAACCTGCCTGGACACCCGGGGGGAAACGATGATAAA AAAGATAAAAAAAAAGAAAAGAAACCTTTGGAGGCCGCCCCGCCCTCCCACGTGGGGCGC CGCAAAAAGCCAAAGGGAGCCATGGGAGCTTCCAAGCTGCCGAACGTGACTCCCGTCACG AAATGCCGCATGCGCCTGCTGAAGTTGGAGCGCGTAAAAGACTATTTGCTGCTGGAAGAA GAATACATCAGCAACCAGGAGCAGCACAAGCCGGCGGAAGAAAGAAATGAAGAGGAAGTG TCGCGGGTGGACGAACTGCGGGGCTCGCCGTTGAGTGTCGGTACACTGGAGGAGCTGATC GACGAGCAGCACGCGATCGTCAGCTCTTCGATCGGCCCAGAATATTATGTCAACATTTTG TCCTTCGTCGACAAGGACCTCCTCGAGCCCGGCTGCTCCGTGCTGCTCCACAACAAGACG AGCAGCATTGTGGGCATTTTGAGCGACGAAGTTGACCCGCTGATTTCAGTGATGAAAGTG GAGAAGGCGCCGCTGGAAACCTACGGGGATATAGGCGGGCTTGAGAAGCAGATCCAGGAA GTAAAAGAAGCAGTTGAATTCCCTCTGACTCACCCAGAATTCTTCGAAGACATCGGCATT GCGCCGCCCAAAGGCGTCATTCTGTACGGGCCGCCAGGCACTGGAAAGACGCTGCTGGCG AAGGCCGTGGCGAACGAAACGAGCGCCACTTTCCTGCGAGTGGTGGGAAGTGAATTAATT CAAAAGTATTTGGGAGATGGTCCCAAACTTGTTCGCGAAATGTTCAAACTGGCGAAAGAA AACGCGCCTTCAATAGTCTTCATAGACGAGATCGACGCCGTGGGCACGAAGAGGTACGAC GCGACGAGCGGGGGCGAGAAGGAAATCCAGCGGACGATGCTGGAGCTGCTGAACCAGCTG GACGGCTTCGAAGCTCGCGGAGATGTGAAAGTCATTTTGGCAACAAATAGAATTGAGTCT TTAGACCCTGCGTTGATTCGGCCGGGGCGAATCGACCGGAAGATCCAGCTTCCCAACCCC GACACCAAAACTAAGCGCAAGATCTTTCAAATACACACTTCGCGAATGACGATGGCGGAC GATGTTGACCTCGAGGAGTTTGTCATGGCCAAGGATGAGCTCTCGGGGGCGGACATTAAG GCGATCTGCACAGAGGCGGGCATGTTGGCTCTGCGGGAAAGAAGAATGAAAATAACTCAA GACGACTTGAGACAGGCAAAAGAGAAGGCTCTGTACAGAAAGAAGGGAGATATTCCGGAG GGTTTGTATCTTTGA
  • Download Fasta

  • Fasta :-

    MGNAHGGFNLPGHPGGNDDKKDKKKEKKPLEAAPPSHVGRRKKPKGAMGASKLPNVTPVT KCRMRLLKLERVKDYLLLEEEYISNQEQHKPAEERNEEEVSRVDELRGSPLSVGTLEELI DEQHAIVSSSIGPEYYVNILSFVDKDLLEPGCSVLLHNKTSSIVGILSDEVDPLISVMKV EKAPLETYGDIGGLEKQIQEVKEAVEFPLTHPEFFEDIGIAPPKGVILYGPPGTGKTLLA KAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKLAKENAPSIVFIDEIDAVGTKRYD ATSGGEKEIQRTMLELLNQLDGFEARGDVKVILATNRIESLDPALIRPGRIDRKIQLPNP DTKTKRKIFQIHTSRMTMADDVDLEEFVMAKDELSGADIKAICTEAGMLALRERRMKITQ DDLRQAKEKALYRKKGDIPEGLYL

  • title: ATP binding site
  • coordinates: P231,P232,G233,T234,G235,K236,T237,L238,D289,N336
No Results
No Results
IDSitePeptideScoreMethod
ETH_00015775303 SYDATSGGEK0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India