ETH_00017225 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00017225OTHER0.4399720.2324480.327580
No Results

  • Fasta :-

    >ETH_00017225 MFLIGLSLGGWVALRAVQLAAAERRNRAAAAAAAADPTAAAAAAADFTYSHVFQDNQSYM ECCTTPEAAAAAAATDADSAAAAGAAAAAAEAPLGLRGLVLLSPMLQLSRRRYLQRSRLL QFAAAAFAAVRPHAAVVPPRKSRRRHPHLHAYYSSDPLTYKEGVPAGIAVPLLWEMEAAT TPQELLLLQQQDAAAVLMLHTVHDPLCDISGPVSCFSELAGIRDRQLLAIEGPPLPAAAA GAQQQQQQQDASSSSGDPQQHVHPKLRKLHPYFHQHLPDPPSPQPHQPQQQQRQQQQQQE VAASVEEIERRMQQLSQTGEQQPKVFIAKGVDVLHDLPNEPGQQHLFRLLATWITCRCP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00017225.fa Sequence name : ETH_00017225 Sequence length : 359 VALUES OF COMPUTED PARAMETERS Coef20 : 4.438 CoefTot : 0.657 ChDiff : -2 ZoneTo : 22 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.353 1.706 0.175 0.626 MesoH : -0.005 0.577 -0.191 0.299 MuHd_075 : 15.785 15.373 3.732 4.124 MuHd_095 : 18.741 12.808 5.640 4.560 MuHd_100 : 17.470 11.751 5.751 4.201 MuHd_105 : 19.282 12.924 5.620 4.423 Hmax_075 : 16.800 19.800 3.263 6.040 Hmax_095 : 15.500 16.713 2.821 5.820 Hmax_100 : 17.300 16.800 2.928 6.700 Hmax_105 : 14.800 16.800 2.980 5.810 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8052 0.1948 DFMC : 0.7880 0.2120
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 359 ETH_00017225 MFLIGLSLGGWVALRAVQLAAAERRNRAAAAAAAADPTAAAAAAADFTYSHVFQDNQSYMECCTTPEAAAAAAATDADSA 80 AAAGAAAAAAEAPLGLRGLVLLSPMLQLSRRRYLQRSRLLQFAAAAFAAVRPHAAVVPPRKSRRRHPHLHAYYSSDPLTY 160 KEGVPAGIAVPLLWEMEAATTPQELLLLQQQDAAAVLMLHTVHDPLCDISGPVSCFSELAGIRDRQLLAIEGPPLPAAAA 240 GAQQQQQQQDASSSSGDPQQHVHPKLRKLHPYFHQHLPDPPSPQPHQPQQQQRQQQQQQEVAASVEEIERRMQQLSQTGE 320 QQPKVFIAKGVDVLHDLPNEPGQQHLFRLLATWITCRCP 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ....................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00017225 15 GGWVALR|AV 0.094 . ETH_00017225 24 QLAAAER|RN 0.084 . ETH_00017225 25 LAAAERR|NR 0.131 . ETH_00017225 27 AAERRNR|AA 0.285 . ETH_00017225 97 EAPLGLR|GL 0.065 . ETH_00017225 110 PMLQLSR|RR 0.061 . ETH_00017225 111 MLQLSRR|RY 0.103 . ETH_00017225 112 LQLSRRR|YL 0.127 . ETH_00017225 116 RRRYLQR|SR 0.140 . ETH_00017225 118 RYLQRSR|LL 0.071 . ETH_00017225 131 AAFAAVR|PH 0.081 . ETH_00017225 140 AAVVPPR|KS 0.095 . ETH_00017225 141 AVVPPRK|SR 0.103 . ETH_00017225 143 VPPRKSR|RR 0.287 . ETH_00017225 144 PPRKSRR|RH 0.137 . ETH_00017225 145 PRKSRRR|HP 0.138 . ETH_00017225 161 SDPLTYK|EG 0.061 . ETH_00017225 223 SELAGIR|DR 0.069 . ETH_00017225 225 LAGIRDR|QL 0.101 . ETH_00017225 265 QQHVHPK|LR 0.064 . ETH_00017225 267 HVHPKLR|KL 0.167 . ETH_00017225 268 VHPKLRK|LH 0.065 . ETH_00017225 293 QPQQQQR|QQ 0.153 . ETH_00017225 310 SVEEIER|RM 0.069 . ETH_00017225 311 VEEIERR|MQ 0.121 . ETH_00017225 324 TGEQQPK|VF 0.070 . ETH_00017225 329 PKVFIAK|GV 0.093 . ETH_00017225 348 GQQHLFR|LL 0.119 . ETH_00017225 357 ATWITCR|CP 0.078 . ____________________________^_________________

  • Fasta :-

    >ETH_00017225 ATGTTTCTCATCGGGCTTTCGCTGGGGGGCTGGGTGGCGCTGAGGGCGGTGCAGCTGGCA GCAGCAGAAAGGCGCAACAGAGCAGCAGCAGCAGCAGCAGCAGCAGACCCGACAGCAGCA GCAGCAGCGGCGGCAGACTTCACCTACAGCCACGTCTTCCAAGACAACCAGAGCTACATG GAGTGCTGCACGACGCCCGAAGCAGCAGCTGCAGCAGCAGCAACGGACGCAGACTCCGCT GCTGCTGCAGGAGCAGCAGCTGCTGCTGCTGAGGCCCCTCTTGGGCTGCGGGGGCTCGTG CTGCTCTCCCCCATGCTGCAGCTCTCCCGCAGGCGCTACCTGCAGCGGTCGCGGCTGCTG CAGTTTGCTGCTGCAGCATTTGCTGCAGTGAGACCCCACGCGGCAGTCGTTCCTCCTAGG AAGAGCCGCCGGCGGCACCCCCACCTGCATGCGTACTACAGCTCAGACCCGCTGACTTAC AAAGAAGGAGTGCCTGCTGGAATAGCAGTGCCTTTGCTGTGGGAGATGGAAGCAGCAACA ACTCCGCAGGAGCTGCTGCTGCTGCAGCAGCAAGATGCTGCTGCAGTGCTGATGCTGCAC ACTGTCCACGACCCCCTCTGCGACATCAGCGGCCCAGTTAGCTGCTTCTCGGAGCTCGCG GGGATCCGGGACAGGCAGCTGCTGGCCATAGAGGGGCCCCCGCTTCCTGCTGCTGCTGCA GGGGCGCAGCAGCAGCAGCAGCAGCAGGACGCCAGCAGCAGCAGCGGCGACCCGCAGCAG CACGTGCACCCCAAGCTGCGCAAGCTGCACCCCTACTTCCACCAGCACCTGCCGGACCCC CCCTCCCCCCAGCCGCATCAGCCGCAGCAGCAGCAGAGGCAGCAGCAGCAGCAGCAGGAG GTGGCGGCGAGCGTGGAAGAGATAGAACGGCGCATGCAGCAGCTAAGCCAGACCGGCGAG CAGCAGCCAAAAGTCTTCATCGCCAAGGGGGTCGATGTGCTGCACGACTTGCCCAACGAG CCGGGGCAGCAGCACCTCTTTCGGCTGCTCGCGACCTGGATCACCTGCCGCTGCCCCTAG
  • Download Fasta

  • Fasta :-

    MFLIGLSLGGWVALRAVQLAAAERRNRAAAAAAAADPTAAAAAAADFTYSHVFQDNQSYM ECCTTPEAAAAAAATDADSAAAAGAAAAAAEAPLGLRGLVLLSPMLQLSRRRYLQRSRLL QFAAAAFAAVRPHAAVVPPRKSRRRHPHLHAYYSSDPLTYKEGVPAGIAVPLLWEMEAAT TPQELLLLQQQDAAAVLMLHTVHDPLCDISGPVSCFSELAGIRDRQLLAIEGPPLPAAAA GAQQQQQQQDASSSSGDPQQHVHPKLRKLHPYFHQHLPDPPSPQPHQPQQQQRQQQQQQE VAASVEEIERRMQQLSQTGEQQPKVFIAKGVDVLHDLPNEPGQQHLFRLLATWITCRCP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00017225142 SPPRKSRRRH0.997unspETH_00017225304 SEVAASVEEI0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India