ETH_00019930 | microsomal signal peptidase subunit SPCS1 domain-containing protein, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00019930OTHER0.9941140.0012870.004599
No Results

  • Fasta :-

    >ETH_00019930 MLASAREVLLSLREGVVDFTAQQVLQRLVTMLFALGTCFGFIYGFATESFYDSVLCVMVM AAIATVICVPSWPLYKRNTIDWAPHDPERIAKLYEEEMAQARSLKEAVSALPSKKKGQVN PKKRS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00019930.fa Sequence name : ETH_00019930 Sequence length : 125 VALUES OF COMPUTED PARAMETERS Coef20 : 4.505 CoefTot : 0.651 ChDiff : 3 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.318 2.735 0.627 0.776 MesoH : 0.538 1.113 -0.015 0.415 MuHd_075 : 14.241 8.844 2.943 2.041 MuHd_095 : 37.340 21.809 9.063 5.909 MuHd_100 : 34.554 21.332 8.468 5.851 MuHd_105 : 25.790 16.471 6.582 4.997 Hmax_075 : 6.800 18.500 1.234 5.380 Hmax_095 : 16.400 18.900 2.972 5.480 Hmax_100 : 18.600 23.500 3.714 6.760 Hmax_105 : 17.000 21.200 3.738 6.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9421 0.0579 DFMC : 0.9595 0.0405
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 125 ETH_00019930 MLASAREVLLSLREGVVDFTAQQVLQRLVTMLFALGTCFGFIYGFATESFYDSVLCVMVMAAIATVICVPSWPLYKRNTI 80 DWAPHDPERIAKLYEEEMAQARSLKEAVSALPSKKKGQVNPKKRS 160 ................................................................................ 80 ............................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00019930 6 -MLASAR|EV 0.102 . ETH_00019930 13 EVLLSLR|EG 0.062 . ETH_00019930 27 AQQVLQR|LV 0.108 . ETH_00019930 76 PSWPLYK|RN 0.054 . ETH_00019930 77 SWPLYKR|NT 0.193 . ETH_00019930 89 APHDPER|IA 0.122 . ETH_00019930 92 DPERIAK|LY 0.186 . ETH_00019930 102 EEMAQAR|SL 0.164 . ETH_00019930 105 AQARSLK|EA 0.197 . ETH_00019930 114 VSALPSK|KK 0.078 . ETH_00019930 115 SALPSKK|KG 0.080 . ETH_00019930 116 ALPSKKK|GQ 0.084 . ETH_00019930 122 KGQVNPK|KR 0.070 . ETH_00019930 123 GQVNPKK|RS 0.102 . ETH_00019930 124 QVNPKKR|S- 0.462 . ____________________________^_________________

  • Fasta :-

    >ETH_00019930 ATGCTGGCGTCAGCACGGGAAGTGCTCCTTTCTCTTCGGGAAGGCGTGGTTGACTTCACC GCCCAGCAAGTTCTACAGCGCTTGGTGACGATGCTGTTTGCGTTGGGCACCTGTTTCGGA TTCATTTACGGCTTTGCAACGGAATCTTTTTATGACAGCGTTTTATGCGTGATGGTGATG GCTGCTATTGCCACTGTCATTTGCGTGCCTTCATGGCCCCTGTACAAGCGCAACACTATT GATTGGGCCCCGCATGACCCAGAACGCATAGCAAAGCTGTACGAAGAAGAGATGGCTCAA GCCAGGTCTTTAAAGGAGGCTGTTTCTGCGTTGCCCAGCAAGAAAAAGGGCCAAGTAAAC CCCAAGAAGAGGAGTTGA
  • Download Fasta

  • Fasta :-

    MLASAREVLLSLREGVVDFTAQQVLQRLVTMLFALGTCFGFIYGFATESFYDSVLCVMVM AAIATVICVPSWPLYKRNTIDWAPHDPERIAKLYEEEMAQARSLKEAVSALPSKKKGQVN PKKRS

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001993011 SEVLLSLREG0.995unspETH_00019930103 SAQARSLKEA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India