ETH_00020530 | glycoprotease family domain-containing protein, putative

  • Computed_GO_Component_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
ETH_00020530OTHER0.9998430.0001540.000003
No Results

  • Fasta :-

    >ETH_00020530 MVPTSSKPEDEGSPGAAKERLIVLGIESSANKVGVGVVDSSGNILANPRATFITPPGTGF LPRETAAHHQANVTQLIRKAMDEAGVSPAMITCIAYTAGPGMGAPLAVGALSARTLALLW NKPLVPVNHCIAHIEMGRLVTGCSNPTVLYVSGGNTQVIGYSEGRYRILGETLDMAIGNC IDRVARLLHLPNDPAPGFQVEQMALKFEKLYRATHPEAAAPPLLPLSYNVKGMDVAFSGV LTKAEEAVHLMLELRARKPCSSDAQSRQNAAAAAAGDDPAVESQSAAADSRRPEVAEEMA KRMRTKRSGGQLRKRGNPSRESADSSIPEELLTPESICYSLQEYLFGMLVEITERAMALS HSSDVLVVGGVGCNLRLQQMLREMARQRGCSMGGMDERYCIDNGAMIAYVGLLMYQCGQT VQPSRSFYRQRFRTDQVEVTWRANEAEKTSPQKLN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00020530.fa Sequence name : ETH_00020530 Sequence length : 455 VALUES OF COMPUTED PARAMETERS Coef20 : 2.921 CoefTot : -0.395 ChDiff : 1 ZoneTo : 8 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.582 1.400 0.271 0.571 MesoH : 0.511 0.737 -0.056 0.360 MuHd_075 : 8.261 11.061 2.482 2.694 MuHd_095 : 28.547 14.891 7.840 4.491 MuHd_100 : 26.819 15.794 8.015 4.750 MuHd_105 : 18.645 11.630 6.335 3.670 Hmax_075 : -2.400 0.962 -2.483 1.560 Hmax_095 : 8.600 3.675 0.070 2.110 Hmax_100 : 8.600 2.400 0.070 2.110 Hmax_105 : 0.200 1.050 -1.462 2.053 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9685 0.0315 DFMC : 0.9375 0.0625
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 455 ETH_00020530 MVPTSSKPEDEGSPGAAKERLIVLGIESSANKVGVGVVDSSGNILANPRATFITPPGTGFLPRETAAHHQANVTQLIRKA 80 MDEAGVSPAMITCIAYTAGPGMGAPLAVGALSARTLALLWNKPLVPVNHCIAHIEMGRLVTGCSNPTVLYVSGGNTQVIG 160 YSEGRYRILGETLDMAIGNCIDRVARLLHLPNDPAPGFQVEQMALKFEKLYRATHPEAAAPPLLPLSYNVKGMDVAFSGV 240 LTKAEEAVHLMLELRARKPCSSDAQSRQNAAAAAAGDDPAVESQSAAADSRRPEVAEEMAKRMRTKRSGGQLRKRGNPSR 320 ESADSSIPEELLTPESICYSLQEYLFGMLVEITERAMALSHSSDVLVVGGVGCNLRLQQMLREMARQRGCSMGGMDERYC 400 IDNGAMIAYVGLLMYQCGQTVQPSRSFYRQRFRTDQVEVTWRANEAEKTSPQKLN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................................P............. 320 ................................................................................ 400 ....................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00020530 7 MVPTSSK|PE 0.062 . ETH_00020530 18 GSPGAAK|ER 0.062 . ETH_00020530 20 PGAAKER|LI 0.102 . ETH_00020530 32 IESSANK|VG 0.062 . ETH_00020530 49 NILANPR|AT 0.087 . ETH_00020530 63 GTGFLPR|ET 0.109 . ETH_00020530 78 NVTQLIR|KA 0.082 . ETH_00020530 79 VTQLIRK|AM 0.092 . ETH_00020530 114 VGALSAR|TL 0.075 . ETH_00020530 122 LALLWNK|PL 0.062 . ETH_00020530 138 AHIEMGR|LV 0.088 . ETH_00020530 165 IGYSEGR|YR 0.087 . ETH_00020530 167 YSEGRYR|IL 0.137 . ETH_00020530 183 IGNCIDR|VA 0.075 . ETH_00020530 186 CIDRVAR|LL 0.169 . ETH_00020530 206 VEQMALK|FE 0.059 . ETH_00020530 209 MALKFEK|LY 0.066 . ETH_00020530 212 KFEKLYR|AT 0.113 . ETH_00020530 231 PLSYNVK|GM 0.080 . ETH_00020530 243 FSGVLTK|AE 0.072 . ETH_00020530 255 HLMLELR|AR 0.075 . ETH_00020530 257 MLELRAR|KP 0.090 . ETH_00020530 258 LELRARK|PC 0.131 . ETH_00020530 267 SSDAQSR|QN 0.105 . ETH_00020530 291 SAAADSR|RP 0.108 . ETH_00020530 292 AAADSRR|PE 0.171 . ETH_00020530 301 VAEEMAK|RM 0.061 . ETH_00020530 302 AEEMAKR|MR 0.147 . ETH_00020530 304 EMAKRMR|TK 0.103 . ETH_00020530 306 AKRMRTK|RS 0.090 . ETH_00020530 307 KRMRTKR|SG 0.860 *ProP* ETH_00020530 313 RSGGQLR|KR 0.086 . ETH_00020530 314 SGGQLRK|RG 0.078 . ETH_00020530 315 GGQLRKR|GN 0.179 . ETH_00020530 320 KRGNPSR|ES 0.099 . ETH_00020530 355 LVEITER|AM 0.069 . ETH_00020530 376 GVGCNLR|LQ 0.074 . ETH_00020530 382 RLQQMLR|EM 0.089 . ETH_00020530 386 MLREMAR|QR 0.127 . ETH_00020530 388 REMARQR|GC 0.159 . ETH_00020530 398 MGGMDER|YC 0.120 . ETH_00020530 425 QTVQPSR|SF 0.131 . ETH_00020530 429 PSRSFYR|QR 0.092 . ETH_00020530 431 RSFYRQR|FR 0.133 . ETH_00020530 433 FYRQRFR|TD 0.082 . ETH_00020530 442 QVEVTWR|AN 0.109 . ETH_00020530 448 RANEAEK|TS 0.073 . ETH_00020530 453 EKTSPQK|LN 0.062 . ____________________________^_________________

  • Fasta :-

    >ETH_00020530 ATGGTTCCCACGTCGAGCAAGCCCGAGGATGAAGGCTCGCCAGGAGCTGCGAAAGAAAGG CTGATTGTGCTGGGGATAGAAAGCAGCGCGAACAAAGTGGGCGTGGGCGTAGTGGACAGC TCGGGGAACATCCTGGCGAACCCCCGGGCCACTTTCATCACCCCCCCGGGCACAGGATTT CTCCCGCGGGAAACAGCAGCGCACCACCAGGCAAATGTGACGCAGCTGATTCGCAAGGCG ATGGACGAGGCGGGGGTTTCGCCCGCCATGATCACATGCATTGCCTACACAGCGGGCCCC GGGATGGGGGCCCCCCTGGCTGTGGGGGCCCTCTCTGCGAGGACTTTGGCTCTGCTGTGG AACAAGCCCCTTGTGCCTGTTAACCACTGCATTGCGCACATCGAGATGGGACGCCTGGTG ACGGGCTGCAGCAACCCCACTGTGTTGTATGTGTCCGGGGGAAACACACAAGTGATTGGC TACAGCGAAGGCCGCTACAGGATCTTGGGGGAAACTCTGGACATGGCAATTGGCAACTGC ATAGACAGAGTGGCGCGGCTGCTGCACCTGCCCAACGACCCCGCGCCCGGCTTCCAAGTC GAGCAAATGGCCCTCAAGTTCGAAAAGCTGTATCGGGCCACTCACCCCGAAGCTGCTGCT CCCCCTTTGCTGCCTCTCAGCTACAATGTAAAGGGCATGGACGTCGCCTTCAGCGGGGTG TTAACTAAGGCGGAAGAGGCCGTTCATCTCATGCTCGAGCTCCGCGCGAGAAAGCCTTGC TCCAGCGACGCCCAGTCTAGACAGAATGCTGCTGCTGCTGCTGCTGGTGATGATCCCGCA GTAGAGTCTCAGAGCGCTGCGGCTGACAGCAGACGGCCGGAAGTGGCCGAAGAAATGGCC AAGCGGATGAGGACAAAGCGCAGTGGCGGGCAGCTGCGCAAGAGGGGAAATCCCAGTCGA GAAAGCGCAGACAGCAGCATCCCCGAGGAGCTTCTCACTCCGGAATCCATTTGTTATTCC TTGCAAGAATATCTTTTTGGAATGCTGGTTGAAATTACGGAGCGAGCGATGGCGCTTTCG CACAGTTCAGATGTGCTGGTAGTGGGCGGCGTCGGGTGCAACTTGCGGCTGCAGCAAATG CTGCGGGAAATGGCCCGGCAGCGGGGCTGCTCGATGGGCGGAATGGACGAAAGATACTGC ATTGACAACGGGGCCATGATTGCCTACGTGGGTCTTCTGATGTACCAGTGCGGCCAGACA GTGCAGCCCAGCAGGAGTTTCTACAGGCAAAGGTTTCGCACGGACCAGGTGGAGGTCACC TGGAGAGCAAACGAAGCTGAAAAGACTTCGCCGCAAAAGCTGAACTGA
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  • Fasta :-

    MVPTSSKPEDEGSPGAAKERLIVLGIESSANKVGVGVVDSSGNILANPRATFITPPGTGF LPRETAAHHQANVTQLIRKAMDEAGVSPAMITCIAYTAGPGMGAPLAVGALSARTLALLW NKPLVPVNHCIAHIEMGRLVTGCSNPTVLYVSGGNTQVIGYSEGRYRILGETLDMAIGNC IDRVARLLHLPNDPAPGFQVEQMALKFEKLYRATHPEAAAPPLLPLSYNVKGMDVAFSGV LTKAEEAVHLMLELRARKPCSSDAQSRQNAAAAAAGDDPAVESQSAAADSRRPEVAEEMA KRMRTKRSGGQLRKRGNPSRESADSSIPEELLTPESICYSLQEYLFGMLVEITERAMALS HSSDVLVVGGVGCNLRLQQMLREMARQRGCSMGGMDERYCIDNGAMIAYVGLLMYQCGQT VQPSRSFYRQRFRTDQVEVTWRANEAEKTSPQKLN

  • title: nucleotide binding site
  • coordinates: E27,S28,S29,A30,K32,G34,H129,Y150,V151,S152,G153
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00020530319 SRGNPSRESA0.994unspETH_00020530325 SESADSSIPE0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India