ETH_00020895 | methionine aminopeptidase, putative

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_IDPredictionOTHERSPmTPCS_Position
ETH_00020895mTP0.1677490.0005450.831706CS pos: 34-35. RAF-TS. Pr: 0.5648
No Results

  • Fasta :-

    >ETH_00020895 MVPPLLFGRPGFWGVRTAASRLGCTLSSPRPRAFTSFVLPSSKEAPGEQKGLQEDSKKEK LGENKSGNGRKLQQQQPQLQLPSPLLSRSALRPQEKKFKKTLKEGEFAVLPAQEVPPWVP RPPYAVAADGRPAPPAAAAAAAAAAAAAAAAAAGGSVVYWDPPGWQIDPNGEVQKPAAIE GLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAINFFGFPKALCISV NEVACHGIPDVRPLQEGDIVSIDCTAFLNGFFGDCAATVAVAPVAQQHADLIAAAKAGKP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00020895.fa Sequence name : ETH_00020895 Sequence length : 300 VALUES OF COMPUTED PARAMETERS Coef20 : 3.950 CoefTot : -0.251 ChDiff : 5 ZoneTo : 43 KR : 6 DE : 0 CleavSite : 42 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.600 1.800 0.285 0.620 MesoH : 0.000 0.746 -0.147 0.354 MuHd_075 : 37.912 13.585 8.893 8.433 MuHd_095 : 33.066 21.750 8.684 8.984 MuHd_100 : 24.643 20.741 6.899 7.248 MuHd_105 : 25.514 17.519 6.221 5.404 Hmax_075 : 12.717 10.383 2.965 3.967 Hmax_095 : 15.225 15.600 2.577 5.828 Hmax_100 : 14.300 17.800 2.625 5.600 Hmax_105 : 12.338 18.317 2.876 4.655 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1057 0.8943 DFMC : 0.0997 0.9003 This protein is probably imported in mitochondria. f(Ser) = 0.1395 f(Arg) = 0.1163 CMi = 0.59940 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 300 ETH_00020895 MVPPLLFGRPGFWGVRTAASRLGCTLSSPRPRAFTSFVLPSSKEAPGEQKGLQEDSKKEKLGENKSGNGRKLQQQQPQLQ 80 LPSPLLSRSALRPQEKKFKKTLKEGEFAVLPAQEVPPWVPRPPYAVAADGRPAPPAAAAAAAAAAAAAAAAAAGGSVVYW 160 DPPGWQIDPNGEVQKPAAIEGLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAINFFGFPKALCISV 240 NEVACHGIPDVRPLQEGDIVSIDCTAFLNGFFGDCAATVAVAPVAQQHADLIAAAKAGKP 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00020895 9 PPLLFGR|PG 0.094 . ETH_00020895 16 PGFWGVR|TA 0.077 . ETH_00020895 21 VRTAASR|LG 0.069 . ETH_00020895 30 CTLSSPR|PR 0.061 . ETH_00020895 32 LSSPRPR|AF 0.112 . ETH_00020895 43 FVLPSSK|EA 0.064 . ETH_00020895 50 EAPGEQK|GL 0.060 . ETH_00020895 57 GLQEDSK|KE 0.064 . ETH_00020895 58 LQEDSKK|EK 0.095 . ETH_00020895 60 EDSKKEK|LG 0.071 . ETH_00020895 65 EKLGENK|SG 0.069 . ETH_00020895 70 NKSGNGR|KL 0.147 . ETH_00020895 71 KSGNGRK|LQ 0.089 . ETH_00020895 88 PSPLLSR|SA 0.098 . ETH_00020895 92 LSRSALR|PQ 0.106 . ETH_00020895 96 ALRPQEK|KF 0.068 . ETH_00020895 97 LRPQEKK|FK 0.111 . ETH_00020895 99 PQEKKFK|KT 0.069 . ETH_00020895 100 QEKKFKK|TL 0.166 . ETH_00020895 103 KFKKTLK|EG 0.064 . ETH_00020895 121 VPPWVPR|PP 0.095 . ETH_00020895 131 AVAADGR|PA 0.105 . ETH_00020895 175 PNGEVQK|PA 0.074 . ETH_00020895 183 AAIEGLR|AA 0.088 . ETH_00020895 201 LAVSSCK|PG 0.063 . ETH_00020895 215 IDSLVHK|FL 0.091 . ETH_00020895 220 HKFLISK|GA 0.070 . ETH_00020895 234 NFFGFPK|AL 0.072 . ETH_00020895 252 HGIPDVR|PL 0.084 . ETH_00020895 296 DLIAAAK|AG 0.066 . ETH_00020895 299 AAAKAGK|P- 0.067 . ____________________________^_________________

  • Fasta :-

    >ETH_00020895 ATGGTGCCTCCGCTGTTGTTTGGGAGGCCGGGATTTTGGGGTGTACGTACAGCTGCGTCG CGTTTGGGGTGTACATTGAGCTCGCCTCGGCCTCGCGCTTTCACTTCTTTTGTTCTTCCT TCTTCCAAAGAAGCCCCTGGGGAGCAAAAGGGGCTTCAAGAAGACTCAAAAAAAGAAAAG TTAGGAGAAAATAAATCGGGAAATGGCCGGAAACTGCAGCAGCAGCAGCCGCAGCTGCAG CTGCCTTCTCCGCTGCTCAGCCGCTCCGCCTTGAGGCCTCAGGAGAAGAAGTTCAAAAAA ACTTTAAAAGAAGGAGAATTCGCAGTGCTGCCCGCCCAAGAAGTGCCCCCGTGGGTGCCG CGGCCCCCCTACGCTGTGGCGGCTGACGGGCGGCCTGCGCCCCCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAGGGGGAAGTGTGGTCTACTGG GACCCCCCGGGGTGGCAAATAGACCCAAATGGAGAAGTCCAAAAGCCCGCAGCCATCGAA GGCTTAAGAGCTGCTGCTGCTGCTGCAGCTGACGCGCTGCAGCTGGCTGTCAGCAGCTGC AAGCCGGGTGTTACTGCGGAAGAGATCGACTCTTTGGTGCACAAGTTTTTAATTTCTAAA GGAGCTTATCCAGCAGCAATTAATTTCTTTGGTTTTCCCAAGGCGCTTTGCATCTCCGTC AATGAAGTTGCCTGCCACGGCATTCCCGACGTCCGCCCTCTGCAAGAAGGGGATATTGTC TCTATAGACTGCACGGCTTTTCTAAATGGCTTTTTTGGAGACTGCGCTGCAACTGTGGCA GTTGCCCCCGTGGCTCAGCAGCACGCGGACCTCATTGCTGCAGCCAAGGCAGGCAAACCC TAA
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  • Fasta :-

    MVPPLLFGRPGFWGVRTAASRLGCTLSSPRPRAFTSFVLPSSKEAPGEQKGLQEDSKKEK LGENKSGNGRKLQQQQPQLQLPSPLLSRSALRPQEKKFKKTLKEGEFAVLPAQEVPPWVP RPPYAVAADGRPAPPAAAAAAAAAAAAAAAAAAGGSVVYWDPPGWQIDPNGEVQKPAAIE GLRAAAAAAADALQLAVSSCKPGVTAEEIDSLVHKFLISKGAYPAAINFFGFPKALCISV NEVACHGIPDVRPLQEGDIVSIDCTAFLNGFFGDCAATVAVAPVAQQHADLIAAAKAGKP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0002089541 SFVLPSSKEA0.994unspETH_0002089556 SLQEDSKKEK0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India