ETH_00021820 | proteasome subunit alpha type 3, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00021820OTHER0.9997830.0000970.000120
No Results

  • Fasta :-

    >ETH_00021820 MAGLGSGYDISVSTFSPDGRVFQVEYASKAVDGAPLCLAAACKDGVVFAAEVPRVSPLLT KGANKVIFQVNEEIGLVFGGLLSDGRRLWGRARAEAANYKSAFGVSIPLGVLAERLSLFV HSFTLYWHLRPFGVTCLLGGLQPNPKSGFQELTGEIYAIDPSGCCCRFFAAAAGRERPAA KTELEKLNLKAAAAAAAAADLVRLLLQLGEDSQKDTKKEIQVAAITSQNGKVNFHFWQQQ QVAAAVAAAQQAIQAMDSD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00021820.fa Sequence name : ETH_00021820 Sequence length : 259 VALUES OF COMPUTED PARAMETERS Coef20 : 3.457 CoefTot : -0.532 ChDiff : 1 ZoneTo : 8 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.806 1.535 0.202 0.596 MesoH : 0.040 0.569 -0.166 0.303 MuHd_075 : 22.674 10.481 4.714 2.403 MuHd_095 : 9.943 7.961 2.454 2.298 MuHd_100 : 5.046 7.068 0.743 2.036 MuHd_105 : 5.412 3.861 1.345 1.560 Hmax_075 : 15.167 8.517 1.741 4.072 Hmax_095 : 13.400 10.200 1.586 4.600 Hmax_100 : 13.400 10.200 1.562 4.600 Hmax_105 : 10.383 6.067 1.610 4.118 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9681 0.0319 DFMC : 0.9802 0.0198
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 259 ETH_00021820 MAGLGSGYDISVSTFSPDGRVFQVEYASKAVDGAPLCLAAACKDGVVFAAEVPRVSPLLTKGANKVIFQVNEEIGLVFGG 80 LLSDGRRLWGRARAEAANYKSAFGVSIPLGVLAERLSLFVHSFTLYWHLRPFGVTCLLGGLQPNPKSGFQELTGEIYAID 160 PSGCCCRFFAAAAGRERPAAKTELEKLNLKAAAAAAAAADLVRLLLQLGEDSQKDTKKEIQVAAITSQNGKVNFHFWQQQ 240 QVAAAVAAAQQAIQAMDSD 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00021820 20 TFSPDGR|VF 0.096 . ETH_00021820 29 QVEYASK|AV 0.080 . ETH_00021820 43 CLAAACK|DG 0.063 . ETH_00021820 54 FAAEVPR|VS 0.077 . ETH_00021820 61 VSPLLTK|GA 0.084 . ETH_00021820 65 LTKGANK|VI 0.068 . ETH_00021820 86 GLLSDGR|RL 0.071 . ETH_00021820 87 LLSDGRR|LW 0.184 . ETH_00021820 91 GRRLWGR|AR 0.109 . ETH_00021820 93 RLWGRAR|AE 0.090 . ETH_00021820 100 AEAANYK|SA 0.095 . ETH_00021820 115 LGVLAER|LS 0.066 . ETH_00021820 130 TLYWHLR|PF 0.103 . ETH_00021820 146 GLQPNPK|SG 0.100 . ETH_00021820 167 PSGCCCR|FF 0.111 . ETH_00021820 175 FAAAAGR|ER 0.084 . ETH_00021820 177 AAAGRER|PA 0.104 . ETH_00021820 181 RERPAAK|TE 0.069 . ETH_00021820 186 AKTELEK|LN 0.057 . ETH_00021820 190 LEKLNLK|AA 0.062 . ETH_00021820 203 AAADLVR|LL 0.086 . ETH_00021820 214 LGEDSQK|DT 0.075 . ETH_00021820 217 DSQKDTK|KE 0.062 . ETH_00021820 218 SQKDTKK|EI 0.129 . ETH_00021820 231 ITSQNGK|VN 0.066 . ____________________________^_________________

  • Fasta :-

    >ETH_00021820 ATGGCGGGACTTGGCTCCGGCTACGACATTTCCGTGTCTACCTTTTCCCCCGACGGGAGG GTTTTCCAGGTGGAGTACGCTTCGAAGGCCGTCGACGGGGCCCCCTTGTGTCTTGCTGCT GCATGCAAAGACGGAGTCGTTTTTGCTGCTGAAGTTCCCCGCGTTTCTCCGCTGCTGACG AAAGGCGCCAACAAAGTCATTTTCCAAGTCAACGAGGAAATCGGCCTCGTTTTCGGGGGT TTGCTCTCCGACGGCCGGCGGCTGTGGGGCCGGGCTCGGGCGGAAGCGGCAAACTACAAG TCGGCCTTTGGGGTGTCTATACCCCTGGGGGTTTTGGCGGAGAGGCTTTCTTTGTTTGTT CACTCCTTCACTCTTTACTGGCACTTGAGGCCTTTCGGGGTCACCTGCCTCCTTGGGGGT TTGCAGCCAAACCCTAAATCAGGGTTTCAGGAGCTCACGGGAGAAATATACGCGATAGAC CCCAGCGGCTGCTGCTGCAGGTTCTTTGCTGCTGCTGCTGGGCGGGAGCGGCCGGCAGCA AAAACGGAGCTGGAGAAGCTGAACTTGAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAC CTCGTGCGGCTGCTGCTGCAGCTCGGCGAAGACAGCCAAAAAGACACAAAAAAAGAAATC CAAGTTGCTGCTATTACTTCTCAAAATGGCAAAGTTAATTTCCACTTCTGGCAGCAGCAG CAAGTTGCTGCAGCAGTTGCTGCAGCGCAGCAAGCCATCCAGGCCATGGACAGCGACTAG
  • Download Fasta

  • Fasta :-

    MAGLGSGYDISVSTFSPDGRVFQVEYASKAVDGAPLCLAAACKDGVVFAAEVPRVSPLLT KGANKVIFQVNEEIGLVFGGLLSDGRRLWGRARAEAANYKSAFGVSIPLGVLAERLSLFV HSFTLYWHLRPFGVTCLLGGLQPNPKSGFQELTGEIYAIDPSGCCCRFFAAAAGRERPAA KTELEKLNLKAAAAAAAAADLVRLLLQLGEDSQKDTKKEIQVAAITSQNGKVNFHFWQQQ QVAAAVAAAQQAIQAMDSD

  • title: active site
  • coordinates: P35,E51,P53,V66
No Results
No Results
IDSitePeptideScoreMethod
ETH_00021820212 SLGEDSQKDT0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India