ETH_00025040 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00025040OTHER0.9995000.0002470.000254
No Results

  • Fasta :-

    >ETH_00025040 MLCPVATGPNAIPVSLERGHRPLNMVEETEMGDEVLRGTQPPSETRLESGPAPMRSEEAP CEEKDSRGKSAEATEEDCRPEAIETMPHWWRETSAKESCSQGGALCYVGATAILRVELAG SSCEGLLDTGASRSFINPKTVERLQLRVQRLPEEHKFDVATGEQLRNDGVEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00025040.fa Sequence name : ETH_00025040 Sequence length : 172 VALUES OF COMPUTED PARAMETERS Coef20 : 3.478 CoefTot : -0.505 ChDiff : -12 ZoneTo : 16 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.218 1.365 0.312 0.447 MesoH : -1.154 -0.126 -0.472 0.035 MuHd_075 : 20.627 15.786 3.746 4.489 MuHd_095 : 21.953 9.579 4.892 5.373 MuHd_100 : 23.344 14.590 4.769 6.002 MuHd_105 : 19.075 15.216 5.240 4.801 Hmax_075 : 7.263 12.200 1.765 4.104 Hmax_095 : 13.300 11.600 2.551 4.960 Hmax_100 : 15.500 16.200 2.783 5.940 Hmax_105 : 14.817 19.250 3.213 6.347 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9824 0.0176 DFMC : 0.9775 0.0225
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 172 ETH_00025040 MLCPVATGPNAIPVSLERGHRPLNMVEETEMGDEVLRGTQPPSETRLESGPAPMRSEEAPCEEKDSRGKSAEATEEDCRP 80 EAIETMPHWWRETSAKESCSQGGALCYVGATAILRVELAGSSCEGLLDTGASRSFINPKTVERLQLRVQRLPEEHKFDVA 160 TGEQLRNDGVEL 240 ................................................................................ 80 ................................................................................ 160 ............ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00025040 18 IPVSLER|GH 0.086 . ETH_00025040 21 SLERGHR|PL 0.308 . ETH_00025040 37 MGDEVLR|GT 0.080 . ETH_00025040 46 QPPSETR|LE 0.079 . ETH_00025040 55 SGPAPMR|SE 0.099 . ETH_00025040 64 EAPCEEK|DS 0.060 . ETH_00025040 67 CEEKDSR|GK 0.110 . ETH_00025040 69 EKDSRGK|SA 0.105 . ETH_00025040 79 ATEEDCR|PE 0.070 . ETH_00025040 91 TMPHWWR|ET 0.154 . ETH_00025040 96 WRETSAK|ES 0.091 . ETH_00025040 115 GATAILR|VE 0.066 . ETH_00025040 133 LDTGASR|SF 0.087 . ETH_00025040 139 RSFINPK|TV 0.088 . ETH_00025040 143 NPKTVER|LQ 0.077 . ETH_00025040 147 VERLQLR|VQ 0.073 . ETH_00025040 150 LQLRVQR|LP 0.203 . ETH_00025040 156 RLPEEHK|FD 0.065 . ETH_00025040 166 ATGEQLR|ND 0.090 . ____________________________^_________________

  • Fasta :-

    >ETH_00025040 ATGCTGTGTCCGGTAGCGACAGGACCTAATGCCATTCCAGTGTCCCTAGAGCGGGGGCAC CGTCCCCTCAACATGGTAGAGGAAACGGAAATGGGCGATGAGGTCCTGAGGGGGACTCAG CCGCCTTCGGAAACCCGGTTGGAGTCTGGGCCGGCACCGATGCGGAGTGAAGAGGCTCCG TGCGAGGAGAAGGATAGTAGAGGGAAATCTGCAGAAGCGACAGAAGAAGACTGCAGGCCA GAAGCGATAGAGACTATGCCGCACTGGTGGAGGGAAACTAGTGCGAAGGAATCTTGCAGC CAAGGAGGAGCCTTGTGTTACGTGGGTGCAACAGCGATACTTCGCGTTGAGCTTGCAGGA AGTTCATGCGAGGGACTTTTGGACACAGGCGCTTCGAGAAGTTTCATTAACCCTAAAACA GTCGAACGGTTGCAGCTGAGGGTGCAGAGACTTCCAGAAGAGCATAAATTCGATGTTGCT ACAGGTGAACAATTACGCAATGATGGAGTGGAGTTGTGA
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  • Fasta :-

    MLCPVATGPNAIPVSLERGHRPLNMVEETEMGDEVLRGTQPPSETRLESGPAPMRSEEAP CEEKDSRGKSAEATEEDCRPEAIETMPHWWRETSAKESCSQGGALCYVGATAILRVELAG SSCEGLLDTGASRSFINPKTVERLQLRVQRLPEEHKFDVATGEQLRNDGVEL

  • title: inhibitor binding site
  • coordinates: D128,G130,S132,F157,D158,V159
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0002504070 SSRGKSAEAT0.997unspETH_0002504094 SWRETSAKES0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India