ETH_00025145 | Subtilisin-like

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00025145OTHER0.7656010.2260850.008314
No Results

  • Fasta :-

    >ETH_00025145 MRQIAAAATAAATLAAAADPAAAAAAASAPQGALRKLKNSPDSITLLLKWDFSCLAAQRQ QREQQQQQQQQQPVEVYLQLDRDVTRAAAAAEAGKGQVLFTRGVFLRDKAQKQQQQQQQQ QQKQQQQKQKQKQQQQQQQQQQFDDRVFGLQFLSQLLGHNIDLEAEAAELQQELQQELQQ EQQQEQQQELLPQRQQADGAAEQQKSPCVSSPSLCQELLLQKLLQQQEGLTVSKYLSSFD VDVVTFSRLKEFMRESGLQSEEELLQLLKETHSSSCLSQVSLDMKGTLTGSVPAAAAAAT AARGSSPRAAAAAANVEDPYFPLQWHLQAAEGLYNLGADKAWQQMQSAQQQQPQQQQVVV ALLDTGCGPHEDINNILWINSKENCSDGVDHDNNGYVNDCKGWDFVDDTNDITDTYGHGT AVAALMAASFDKKGGRGKP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00025145.fa Sequence name : ETH_00025145 Sequence length : 439 VALUES OF COMPUTED PARAMETERS Coef20 : 4.697 CoefTot : 1.763 ChDiff : -14 ZoneTo : 41 KR : 4 DE : 1 CleavSite : 45 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.271 0.175 0.496 MesoH : -0.371 0.115 -0.354 0.170 MuHd_075 : 24.144 13.866 7.039 4.847 MuHd_095 : 27.900 20.054 7.901 6.914 MuHd_100 : 27.920 19.841 7.700 7.044 MuHd_105 : 26.505 17.930 6.806 6.304 Hmax_075 : 11.433 11.900 1.834 4.317 Hmax_095 : 11.725 13.125 1.864 4.742 Hmax_100 : 11.800 13.200 1.863 4.800 Hmax_105 : 6.100 18.083 -0.218 3.330 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5536 0.4464 DFMC : 0.2664 0.7336 This protein is probably imported in mitochondria. f(Ser) = 0.0488 f(Arg) = 0.0488 CMi = 0.35273 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 439 ETH_00025145 MRQIAAAATAAATLAAAADPAAAAAAASAPQGALRKLKNSPDSITLLLKWDFSCLAAQRQQREQQQQQQQQQPVEVYLQL 80 DRDVTRAAAAAEAGKGQVLFTRGVFLRDKAQKQQQQQQQQQQKQQQQKQKQKQQQQQQQQQQFDDRVFGLQFLSQLLGHN 160 IDLEAEAAELQQELQQELQQEQQQEQQQELLPQRQQADGAAEQQKSPCVSSPSLCQELLLQKLLQQQEGLTVSKYLSSFD 240 VDVVTFSRLKEFMRESGLQSEEELLQLLKETHSSSCLSQVSLDMKGTLTGSVPAAAAAATAARGSSPRAAAAAANVEDPY 320 FPLQWHLQAAEGLYNLGADKAWQQMQSAQQQQPQQQQVVVALLDTGCGPHEDINNILWINSKENCSDGVDHDNNGYVNDC 400 KGWDFVDDTNDITDTYGHGTAVAALMAASFDKKGGRGKP 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00025145 2 -----MR|QI 0.111 . ETH_00025145 35 APQGALR|KL 0.101 . ETH_00025145 36 PQGALRK|LK 0.064 . ETH_00025145 38 GALRKLK|NS 0.150 . ETH_00025145 49 SITLLLK|WD 0.062 . ETH_00025145 59 SCLAAQR|QQ 0.090 . ETH_00025145 62 AAQRQQR|EQ 0.359 . ETH_00025145 82 VYLQLDR|DV 0.097 . ETH_00025145 86 LDRDVTR|AA 0.150 . ETH_00025145 95 AAAEAGK|GQ 0.059 . ETH_00025145 102 GQVLFTR|GV 0.117 . ETH_00025145 107 TRGVFLR|DK 0.235 . ETH_00025145 109 GVFLRDK|AQ 0.066 . ETH_00025145 112 LRDKAQK|QQ 0.083 . ETH_00025145 123 QQQQQQK|QQ 0.082 . ETH_00025145 128 QKQQQQK|QK 0.089 . ETH_00025145 130 QQQQKQK|QK 0.098 . ETH_00025145 132 QQKQKQK|QQ 0.084 . ETH_00025145 146 QQQFDDR|VF 0.098 . ETH_00025145 194 QELLPQR|QQ 0.083 . ETH_00025145 205 GAAEQQK|SP 0.093 . ETH_00025145 222 QELLLQK|LL 0.059 . ETH_00025145 234 EGLTVSK|YL 0.067 . ETH_00025145 248 DVVTFSR|LK 0.074 . ETH_00025145 250 VTFSRLK|EF 0.053 . ETH_00025145 254 RLKEFMR|ES 0.103 . ETH_00025145 269 ELLQLLK|ET 0.056 . ETH_00025145 285 QVSLDMK|GT 0.071 . ETH_00025145 303 AAATAAR|GS 0.113 . ETH_00025145 308 ARGSSPR|AA 0.165 . ETH_00025145 340 YNLGADK|AW 0.063 . ETH_00025145 382 ILWINSK|EN 0.062 . ETH_00025145 401 GYVNDCK|GW 0.072 . ETH_00025145 432 MAASFDK|KG 0.080 . ETH_00025145 433 AASFDKK|GG 0.114 . ETH_00025145 436 FDKKGGR|GK 0.088 . ETH_00025145 438 KKGGRGK|P- 0.072 . ____________________________^_________________

  • Fasta :-

    >ETH_00025145 ATGCGACAAATAGCAGCCGCTGCAACTGCTGCTGCCACTCTTGCTGCTGCTGCAGACCCT GCTGCTGCTGCTGCTGCAGCGTCTGCGCCTCAGGGGGCCCTCCGAAAGCTCAAGAACAGC CCCGACTCCATCACGCTGCTGCTGAAGTGGGACTTTAGCTGCCTTGCTGCTCAGCGACAG CAGCGGGAGCAGCAGCAACAGCAGCAGCAGCAGCAGCCAGTTGAGGTGTATCTACAGCTC GACCGAGATGTCACGCGTGCTGCTGCTGCTGCTGAAGCAGGAAAGGGACAAGTGCTTTTT ACCCGAGGCGTTTTTTTGAGAGACAAGGCGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGAAGCAGCAGCAGCAGAAGCAGAAGCAGAAGCAACAGCAGCAGCAGCAGCAGCAG CAGCAGTTCGATGACCGAGTTTTCGGGCTGCAGTTTCTCTCGCAGCTGCTGGGCCACAAC ATTGACTTGGAAGCAGAAGCAGCAGAGCTGCAGCAGGAGCTGCAGCAGGAGCTGCAGCAG GAGCAGCAGCAGGAGCAGCAGCAGGAGCTGCTGCCGCAACGGCAGCAAGCCGACGGAGCT GCGGAGCAGCAAAAGTCTCCGTGTGTCTCCTCCCCCTCTCTCTGCCAAGAGCTGCTGCTG CAGAAGCTGCTGCAGCAGCAAGAAGGACTAACTGTCTCCAAATATTTATCTTCTTTTGAT GTTGACGTTGTCACTTTTTCCAGACTCAAAGAGTTCATGCGGGAGTCTGGGTTACAGAGT GAAGAAGAGCTGCTGCAGCTGCTGAAGGAGACACACAGCAGCAGCTGTCTCTCTCAAGTG TCTCTCGACATGAAGGGGACACTGACGGGATCGGTTCCTGCTGCTGCTGCTGCTGCTACT GCAGCACGGGGCAGCAGCCCCCGCGCAGCAGCAGCAGCAGCAAATGTTGAAGACCCCTAC TTCCCGCTGCAGTGGCATCTTCAAGCAGCAGAAGGTCTCTACAACTTGGGAGCTGACAAA GCCTGGCAGCAAATGCAAAGCGCGCAGCAGCAGCAGCCGCAGCAGCAGCAAGTGGTGGTG GCGCTGCTGGACACTGGCTGCGGCCCCCACGAAGACATAAATAATATTTTGTGGATTAAC AGCAAAGAGAACTGCAGCGACGGAGTGGACCACGACAACAACGGCTACGTCAACGACTGC AAGGGCTGGGACTTTGTGGACGACACAAACGACATCACGGACACTTATGGGCACGGCACG GCGGTGGCTGCTCTTATGGCTGCGAGCTTTGACAAAAAGGGGGGCAGAGGTAAACCCTAA
  • Download Fasta

  • Fasta :-

    MRQIAAAATAAATLAAAADPAAAAAAASAPQGALRKLKNSPDSITLLLKWDFSCLAAQRQ QREQQQQQQQQQPVEVYLQLDRDVTRAAAAAEAGKGQVLFTRGVFLRDKAQKQQQQQQQQ QQKQQQQKQKQKQQQQQQQQQQFDDRVFGLQFLSQLLGHNIDLEAEAAELQQELQQELQQ EQQQEQQQELLPQRQQADGAAEQQKSPCVSSPSLCQELLLQKLLQQQEGLTVSKYLSSFD VDVVTFSRLKEFMRESGLQSEEELLQLLKETHSSSCLSQVSLDMKGTLTGSVPAAAAAAT AARGSSPRAAAAAANVEDPYFPLQWHLQAAEGLYNLGADKAWQQMQSAQQQQPQQQQVVV ALLDTGCGPHEDINNILWINSKENCSDGVDHDNNGYVNDCKGWDFVDDTNDITDTYGHGT AVAALMAASFDKKGGRGKP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00025145260 SSGLQSEEEL0.991unspETH_00025145306 SARGSSPRAA0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India