ETH_00026815 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00026815SP0.0106730.9885360.000791CS pos: 24-25. GSG-RL. Pr: 0.6530
No Results

  • Fasta :-

    >ETH_00026815 MPSMLHFLAHALFTICCLVQVGSGRLPEFYHSTSAISAELENLEETCPGLFVEREPIDSQ HFIDVVSLSRSENPVSHFFLLAGEHARELITAESALHFLKVLCGEEPALRKKAEAALADT SFTVIVNGNPISRAKVENGDFCVS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00026815.fa Sequence name : ETH_00026815 Sequence length : 144 VALUES OF COMPUTED PARAMETERS Coef20 : 4.341 CoefTot : -0.388 ChDiff : -9 ZoneTo : 27 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.806 1.888 0.308 0.631 MesoH : -0.558 0.321 -0.355 0.214 MuHd_075 : 24.981 15.556 7.823 5.298 MuHd_095 : 16.781 21.416 7.145 4.414 MuHd_100 : 17.532 23.524 6.573 5.726 MuHd_105 : 17.851 23.450 6.487 5.842 Hmax_075 : 17.617 19.483 6.696 6.148 Hmax_095 : 15.500 24.500 6.175 6.730 Hmax_100 : 20.000 24.500 5.634 7.160 Hmax_105 : 19.717 27.883 4.388 7.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9371 0.0629 DFMC : 0.9073 0.0927
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 144 ETH_00026815 MPSMLHFLAHALFTICCLVQVGSGRLPEFYHSTSAISAELENLEETCPGLFVEREPIDSQHFIDVVSLSRSENPVSHFFL 80 LAGEHARELITAESALHFLKVLCGEEPALRKKAEAALADTSFTVIVNGNPISRAKVENGDFCVS 160 ................................................................................ 80 ................................................................ 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00026815 25 VQVGSGR|LP 0.083 . ETH_00026815 54 PGLFVER|EP 0.086 . ETH_00026815 70 DVVSLSR|SE 0.085 . ETH_00026815 87 LAGEHAR|EL 0.135 . ETH_00026815 100 SALHFLK|VL 0.071 . ETH_00026815 110 GEEPALR|KK 0.067 . ETH_00026815 111 EEPALRK|KA 0.099 . ETH_00026815 112 EPALRKK|AE 0.098 . ETH_00026815 133 NGNPISR|AK 0.084 . ETH_00026815 135 NPISRAK|VE 0.061 . ____________________________^_________________

  • Fasta :-

    >ETH_00026815 ATGCCTTCTATGCTGCACTTCCTGGCCCACGCTCTGTTCACAATTTGCTGCCTAGTTCAA GTGGGCAGCGGGCGTTTGCCTGAGTTCTACCATTCCACCTCAGCAATATCAGCAGAACTT GAGAATCTGGAGGAAACTTGTCCTGGACTTTTCGTAGAAAGAGAGCCAATCGACAGCCAG CACTTCATTGATGTTGTTTCCCTCTCCAGATCTGAAAATCCCGTGTCGCACTTCTTCCTG TTGGCAGGAGAGCACGCCAGAGAGCTCATCACGGCTGAAAGCGCTCTTCATTTCCTAAAA GTTCTCTGTGGAGAAGAACCTGCACTGCGCAAGAAAGCGGAAGCTGCACTGGCTGACACT TCCTTCACAGTCATCGTGAACGGAAATCCGATATCTAGGGCTAAAGTTGAAAACGGGGAC TTCTGTGTCAGTTGA
  • Download Fasta

  • Fasta :-

    MPSMLHFLAHALFTICCLVQVGSGRLPEFYHSTSAISAELENLEETCPGLFVEREPIDSQ HFIDVVSLSRSENPVSHFFLLAGEHARELITAESALHFLKVLCGEEPALRKKAEAALADT SFTVIVNGNPISRAKVENGDFCVS

    No Results
No Results
No Results
IDSitePeptideScoreMethod
ETH_0002681569 SVVSLSRSEN0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India