ETH_00027675 | Eukaryotic translation initiation factor 3 subunit 9, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003676      

  • Computed_GO_Functions:  nucleic acid binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00027675OTHER0.9997390.0002360.000025
No Results

  • Fasta :-

    >ETH_00027675 MVKVTKEDLEKLEIKEEEQEELLKYISDDSDEDEEALTKKLEAFEPLLQMDDRFPDTVIM VGVPLVGADRLEKLTAVLRKKIADELSRKGGEDVEGSFLIELPMNSDKTLTRGCCFLTFP SVYAAQHAARALNGYKIDKRHTFRAALLDEFDEIVARDKDYKPAITLRGFTREDVRWWLS DARFREQFVLRFDSETEVYWLDPLEGNPCTLCYDGQKEKQDGKAVWTELKVQWSPQGSFL ATFHRQGIALWAGRNFEKKARLEHKEVKQIMFSPKETYMLSWDGTPASMRNEKAFKTWNV MTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKELCIYAMDPKDNFPDQAADED VTPV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00027675.fa Sequence name : ETH_00027675 Sequence length : 364 VALUES OF COMPUTED PARAMETERS Coef20 : 2.751 CoefTot : -0.226 ChDiff : -16 ZoneTo : 6 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.059 1.094 0.187 0.414 MesoH : -1.126 0.175 -0.484 0.089 MuHd_075 : 25.352 12.583 7.593 4.100 MuHd_095 : 30.116 14.638 8.430 5.232 MuHd_100 : 29.941 14.612 8.103 4.360 MuHd_105 : 24.847 12.963 6.555 3.241 Hmax_075 : -7.583 5.600 -3.094 2.415 Hmax_095 : -4.600 6.000 -2.725 2.250 Hmax_100 : -3.600 6.000 -2.725 2.410 Hmax_105 : -5.200 5.600 -3.279 1.490 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9763 0.0237 DFMC : 0.9465 0.0535
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 364 ETH_00027675 MVKVTKEDLEKLEIKEEEQEELLKYISDDSDEDEEALTKKLEAFEPLLQMDDRFPDTVIMVGVPLVGADRLEKLTAVLRK 80 KIADELSRKGGEDVEGSFLIELPMNSDKTLTRGCCFLTFPSVYAAQHAARALNGYKIDKRHTFRAALLDEFDEIVARDKD 160 YKPAITLRGFTREDVRWWLSDARFREQFVLRFDSETEVYWLDPLEGNPCTLCYDGQKEKQDGKAVWTELKVQWSPQGSFL 240 ATFHRQGIALWAGRNFEKKARLEHKEVKQIMFSPKETYMLSWDGTPASMRNEKAFKTWNVMTGEMLRQFATPAATPRGTE 320 FPHFLFSHDEKYLAKIGDKELCIYAMDPKDNFPDQAADEDVTPV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00027675 3 ----MVK|VT 0.059 . ETH_00027675 6 -MVKVTK|ED 0.061 . ETH_00027675 11 TKEDLEK|LE 0.068 . ETH_00027675 15 LEKLEIK|EE 0.068 . ETH_00027675 24 EQEELLK|YI 0.067 . ETH_00027675 39 DEEALTK|KL 0.064 . ETH_00027675 40 EEALTKK|LE 0.074 . ETH_00027675 53 LLQMDDR|FP 0.131 . ETH_00027675 70 PLVGADR|LE 0.057 . ETH_00027675 73 GADRLEK|LT 0.095 . ETH_00027675 79 KLTAVLR|KK 0.079 . ETH_00027675 80 LTAVLRK|KI 0.111 . ETH_00027675 81 TAVLRKK|IA 0.105 . ETH_00027675 88 IADELSR|KG 0.082 . ETH_00027675 89 ADELSRK|GG 0.111 . ETH_00027675 108 LPMNSDK|TL 0.071 . ETH_00027675 112 SDKTLTR|GC 0.084 . ETH_00027675 130 AAQHAAR|AL 0.115 . ETH_00027675 136 RALNGYK|ID 0.055 . ETH_00027675 139 NGYKIDK|RH 0.053 . ETH_00027675 140 GYKIDKR|HT 0.145 . ETH_00027675 144 DKRHTFR|AA 0.109 . ETH_00027675 157 FDEIVAR|DK 0.116 . ETH_00027675 159 EIVARDK|DY 0.069 . ETH_00027675 162 ARDKDYK|PA 0.077 . ETH_00027675 168 KPAITLR|GF 0.110 . ETH_00027675 172 TLRGFTR|ED 0.088 . ETH_00027675 176 FTREDVR|WW 0.069 . ETH_00027675 183 WWLSDAR|FR 0.087 . ETH_00027675 185 LSDARFR|EQ 0.085 . ETH_00027675 191 REQFVLR|FD 0.130 . ETH_00027675 217 LCYDGQK|EK 0.061 . ETH_00027675 219 YDGQKEK|QD 0.082 . ETH_00027675 223 KEKQDGK|AV 0.086 . ETH_00027675 230 AVWTELK|VQ 0.055 . ETH_00027675 245 FLATFHR|QG 0.089 . ETH_00027675 254 IALWAGR|NF 0.089 . ETH_00027675 258 AGRNFEK|KA 0.069 . ETH_00027675 259 GRNFEKK|AR 0.115 . ETH_00027675 261 NFEKKAR|LE 0.108 . ETH_00027675 265 KARLEHK|EV 0.113 . ETH_00027675 268 LEHKEVK|QI 0.075 . ETH_00027675 275 QIMFSPK|ET 0.070 . ETH_00027675 290 GTPASMR|NE 0.078 . ETH_00027675 293 ASMRNEK|AF 0.155 . ETH_00027675 296 RNEKAFK|TW 0.069 . ETH_00027675 307 MTGEMLR|QF 0.073 . ETH_00027675 317 TPAATPR|GT 0.131 . ETH_00027675 331 LFSHDEK|YL 0.109 . ETH_00027675 335 DEKYLAK|IG 0.069 . ETH_00027675 339 LAKIGDK|EL 0.061 . ETH_00027675 349 IYAMDPK|DN 0.077 . ____________________________^_________________

  • Fasta :-

    >ETH_00027675 ATGGTAAAAGTAACGAAGGAGGATTTGGAGAAGTTGGAGATCAAGGAGGAGGAGCAGGAA GAGCTTCTGAAATACATTTCAGATGACAGCGATGAAGACGAAGAAGCTCTTACAAAAAAG CTGGAGGCTTTTGAGCCTCTGCTGCAGATGGACGACCGATTCCCAGACACAGTGATCATG GTTGGAGTCCCGCTGGTGGGCGCGGACCGGCTGGAGAAGCTGACGGCGGTGCTGCGGAAG AAGATAGCGGACGAGTTGTCTCGCAAGGGCGGCGAAGACGTCGAGGGTTCCTTCTTGATT GAACTTCCGATGAACTCCGACAAAACCCTAACTCGGGGTTGTTGTTTTTTGACATTTCCG AGTGTATATGCAGCTCAGCATGCAGCCAGGGCCCTCAACGGATACAAGATCGACAAAAGA CATACTTTTCGAGCAGCTCTTCTTGACGAGTTCGACGAGATTGTCGCCAGAGACAAGGAC TACAAGCCCGCCATCACGCTCCGCGGGTTTACGCGGGAGGACGTGCGTTGGTGGCTGAGC GACGCGCGGTTTCGCGAACAGTTCGTGCTGCGCTTCGACTCCGAAACGGAGGTTTACTGG CTAGACCCTCTCGAGGGAAACCCTTGCACTCTTTGCTACGATGGCCAAAAAGAAAAGCAA GACGGAAAGGCGGTTTGGACCGAACTCAAGGTCCAGTGGTCCCCCCAGGGCTCCTTCCTC GCCACCTTCCACAGACAGGGTATTGCCCTGTGGGCCGGCAGGAACTTCGAGAAGAAGGCG CGGCTGGAGCACAAGGAAGTCAAGCAGATCATGTTCTCCCCGAAAGAGACTTACATGCTC TCTTGGGATGGAACCCCAGCATCAATGCGAAACGAAAAGGCGTTTAAGACATGGAACGTG ATGACGGGTGAGATGCTGCGGCAGTTCGCCACGCCCGCAGCCACTCCAAGAGGCACTGAA TTTCCTCACTTTTTATTTTCTCATGATGAAAAGTACTTGGCGAAAATTGGAGACAAAGAA TTGTGCATTTACGCAATGGACCCCAAGGACAACTTCCCGGACCAGGCCGCCGACGAGGAC GTTACTCCTGTGA
  • Download Fasta

  • Fasta :-

    MVKVTKEDLEKLEIKEEEQEELLKYISDDSDEDEEALTKKLEAFEPLLQMDDRFPDTVIM VGVPLVGADRLEKLTAVLRKKIADELSRKGGEDVEGSFLIELPMNSDKTLTRGCCFLTFP SVYAAQHAARALNGYKIDKRHTFRAALLDEFDEIVARDKDYKPAITLRGFTREDVRWWLS DARFREQFVLRFDSETEVYWLDPLEGNPCTLCYDGQKEKQDGKAVWTELKVQWSPQGSFL ATFHRQGIALWAGRNFEKKARLEHKEVKQIMFSPKETYMLSWDGTPASMRNEKAFKTWNV MTGEMLRQFATPAATPRGTEFPHFLFSHDEKYLAKIGDKELCIYAMDPKDNFPDQAADED VTPV

  • title: polypeptide substrate binding site
  • coordinates: V61,V63,R70,K73,L74,A76,V77,L78,K80,K81,R88,A131,L132,N133,G134,K136,I137,T142,F143
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00027675273 SQIMFSPKET0.998unspETH_00027675273 SQIMFSPKET0.998unspETH_00027675273 SQIMFSPKET0.998unspETH_00027675315 TTPAATPRGT0.99unspETH_0002767530 SISDDSDEDE0.998unspETH_0002767587 SADELSRKGG0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India