ETH_00030480 | hypothetical protein

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_IDPredictionOTHERSPmTPCS_Position
ETH_00030480OTHER0.9052140.0043960.090390
No Results

  • Fasta :-

    >ETH_00030480 MILSSAALNLTGYQTAAAAHAAERPALKALLETAPALPPPAQQPAPVLLPTALRSGSDVF SHLLHFQKRIFLWGPLTEEAAAAAAAQLLLLQGEQRESSKEEKMRSRMNLKSPKIAAAAN PTAAAAAAAAEKARVELIINSRGGPLSAALALYDVLGLVSGDLLLKTLAVGCVGHSAALL LSSGLLGKRKAAKNAKIFFCQSACTAQGSADELLQQAAAAAAQEQLFDLLLAKRCGRTAE EIASWRQQSKVFSAEEAKAVGLIDEIISE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00030480.fa Sequence name : ETH_00030480 Sequence length : 269 VALUES OF COMPUTED PARAMETERS Coef20 : 4.292 CoefTot : 0.783 ChDiff : 3 ZoneTo : 22 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.541 1.688 0.284 0.611 MesoH : 0.167 0.966 -0.103 0.365 MuHd_075 : 17.013 16.602 5.657 5.248 MuHd_095 : 12.078 10.972 4.089 2.032 MuHd_100 : 10.352 8.516 3.896 1.612 MuHd_105 : 8.304 5.790 3.038 2.196 Hmax_075 : 14.500 17.100 3.178 5.940 Hmax_095 : 11.725 11.300 1.542 3.830 Hmax_100 : 11.600 9.600 1.525 4.320 Hmax_105 : 10.600 13.650 1.139 5.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9121 0.0879 DFMC : 0.8374 0.1626
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 269 ETH_00030480 MILSSAALNLTGYQTAAAAHAAERPALKALLETAPALPPPAQQPAPVLLPTALRSGSDVFSHLLHFQKRIFLWGPLTEEA 80 AAAAAAQLLLLQGEQRESSKEEKMRSRMNLKSPKIAAAANPTAAAAAAAAEKARVELIINSRGGPLSAALALYDVLGLVS 160 GDLLLKTLAVGCVGHSAALLLSSGLLGKRKAAKNAKIFFCQSACTAQGSADELLQQAAAAAAQEQLFDLLLAKRCGRTAE 240 EIASWRQQSKVFSAEEAKAVGLIDEIISE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00030480 24 AAHAAER|PA 0.109 . ETH_00030480 28 AERPALK|AL 0.064 . ETH_00030480 54 LLPTALR|SG 0.151 . ETH_00030480 68 HLLHFQK|RI 0.066 . ETH_00030480 69 LLHFQKR|IF 0.258 . ETH_00030480 96 LLQGEQR|ES 0.126 . ETH_00030480 100 EQRESSK|EE 0.059 . ETH_00030480 103 ESSKEEK|MR 0.072 . ETH_00030480 105 SKEEKMR|SR 0.135 . ETH_00030480 107 EEKMRSR|MN 0.091 . ETH_00030480 111 RSRMNLK|SP 0.075 . ETH_00030480 114 MNLKSPK|IA 0.086 . ETH_00030480 132 AAAAAEK|AR 0.058 . ETH_00030480 134 AAAEKAR|VE 0.089 . ETH_00030480 142 ELIINSR|GG 0.067 . ETH_00030480 166 SGDLLLK|TL 0.057 . ETH_00030480 188 SSGLLGK|RK 0.059 . ETH_00030480 189 SGLLGKR|KA 0.128 . ETH_00030480 190 GLLGKRK|AA 0.093 . ETH_00030480 193 GKRKAAK|NA 0.089 . ETH_00030480 196 KAAKNAK|IF 0.073 . ETH_00030480 233 FDLLLAK|RC 0.058 . ETH_00030480 234 DLLLAKR|CG 0.127 . ETH_00030480 237 LAKRCGR|TA 0.317 . ETH_00030480 246 EEIASWR|QQ 0.110 . ETH_00030480 250 SWRQQSK|VF 0.083 . ETH_00030480 258 FSAEEAK|AV 0.096 . ____________________________^_________________

  • Fasta :-

    >ETH_00030480 ATGATCCTGTCGTCAGCAGCCCTGAACCTCACCGGCTACCAGACCGCAGCAGCAGCACAT GCAGCCGAAAGGCCCGCACTAAAGGCGCTGCTGGAAACAGCGCCTGCTCTGCCGCCTCCG GCGCAGCAGCCAGCCCCCGTGCTGCTGCCCACTGCGCTGCGCAGCGGCAGCGACGTGTTC AGCCATTTGCTGCACTTCCAGAAGCGGATTTTTCTGTGGGGCCCTTTGACGGAGGAAGCA GCAGCAGCAGCAGCAGCACAGCTGCTGCTGCTGCAGGGGGAGCAGCGGGAAAGCAGCAAA GAAGAAAAAATGAGAAGCAGAATGAACCTCAAAAGCCCCAAAATCGCAGCAGCAGCAAAC CCAACTGCAGCAGCAGCAGCAGCAGCAGCAGAAAAAGCCCGAGTTGAACTTATCATCAAC AGCAGAGGCGGCCCTCTTTCGGCAGCGCTGGCGCTGTATGACGTGCTGGGCCTGGTGTCT GGGGATTTGCTGCTGAAGACTTTGGCTGTGGGGTGTGTGGGCCACTCTGCTGCTTTGCTG CTGTCTTCGGGCCTTCTTGGAAAAAGAAAAGCAGCAAAAAATGCAAAAATATTCTTTTGC CAGTCGGCCTGCACAGCCCAAGGCTCTGCTGACGAGCTGCTGCAGCAAGCTGCTGCTGCT GCTGCTCAAGAGCAATTGTTTGATTTGCTTCTGGCCAAGCGCTGCGGCAGAACAGCAGAA GAAATCGCCAGCTGGCGCCAGCAAAGCAAAGTCTTCTCTGCGGAGGAGGCGAAGGCAGTG GGACTAATTGATGAAATTATTTCAGAATAA
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  • Fasta :-

    MILSSAALNLTGYQTAAAAHAAERPALKALLETAPALPPPAQQPAPVLLPTALRSGSDVF SHLLHFQKRIFLWGPLTEEAAAAAAAQLLLLQGEQRESSKEEKMRSRMNLKSPKIAAAAN PTAAAAAAAAEKARVELIINSRGGPLSAALALYDVLGLVSGDLLLKTLAVGCVGHSAALL LSSGLLGKRKAAKNAKIFFCQSACTAQGSADELLQQAAAAAAQEQLFDLLLAKRCGRTAE EIASWRQQSKVFSAEEAKAVGLIDEIISE

  • title: active site
  • coordinates: H175
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00030480253 SSKVFSAEEA0.996unspETH_00030480253 SSKVFSAEEA0.996unspETH_00030480253 SSKVFSAEEA0.996unspETH_0003048098 SEQRESSKEE0.998unspETH_0003048099 SQRESSKEEK0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India