ETH_00032180 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00032180OTHER0.9999530.0000390.000009
No Results

  • Fasta :-

    >ETH_00032180 MSVKPDIAPDTRTVAPGNSRRTPAEPYADGSDDEEFCEMVALSPTGRCATMCIFGCISIM GCRSSVVRRLSFYPPFPAGYSLQGDQLYIQEVFNAATAGRGFRGTAAAEQQQQRPPPREG QESIQQLLEHNRLPERVQVCHIRRGKKHQLAAVLLWSTAGVPPEHAQESKAKEYALTNRF LIVFSHGNSTDIGHMFGLHYRMCFRCQVNVLAYDYSGYGWSDGKATEAALYKDINAVYSF AVKELNVPPKNIILYGHSVGSGPCCDFVAKRKQKGLGGVILHSSIASGLRLFIHNIEKAP WFDAFQNAEKLKKVYDVPMLLIHGRLDRQVPFSHSLKLEAACREADARYANLQESPHHRC LLRAPLLSSKADGPPKGPPKRDKEMQKNRVQTWWIPNADHNDVEHRTGDEYYQRISAFLK FCAKWNEQEPATPPNA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00032180.fa Sequence name : ETH_00032180 Sequence length : 436 VALUES OF COMPUTED PARAMETERS Coef20 : 3.727 CoefTot : -0.254 ChDiff : 9 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.324 1.665 0.508 0.495 MesoH : -0.212 0.359 -0.160 0.204 MuHd_075 : 3.848 4.097 2.037 0.131 MuHd_095 : 2.454 12.683 1.680 2.734 MuHd_100 : 4.326 12.794 1.768 3.177 MuHd_105 : 9.147 12.704 2.170 3.565 Hmax_075 : -2.200 4.100 -0.832 1.983 Hmax_095 : -2.500 7.000 -1.694 2.490 Hmax_100 : -2.500 6.600 -1.801 2.350 Hmax_105 : 1.517 9.683 0.218 3.652 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9956 0.0044 DFMC : 0.9973 0.0027
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 436 ETH_00032180 MSVKPDIAPDTRTVAPGNSRRTPAEPYADGSDDEEFCEMVALSPTGRCATMCIFGCISIMGCRSSVVRRLSFYPPFPAGY 80 SLQGDQLYIQEVFNAATAGRGFRGTAAAEQQQQRPPPREGQESIQQLLEHNRLPERVQVCHIRRGKKHQLAAVLLWSTAG 160 VPPEHAQESKAKEYALTNRFLIVFSHGNSTDIGHMFGLHYRMCFRCQVNVLAYDYSGYGWSDGKATEAALYKDINAVYSF 240 AVKELNVPPKNIILYGHSVGSGPCCDFVAKRKQKGLGGVILHSSIASGLRLFIHNIEKAPWFDAFQNAEKLKKVYDVPML 320 LIHGRLDRQVPFSHSLKLEAACREADARYANLQESPHHRCLLRAPLLSSKADGPPKGPPKRDKEMQKNRVQTWWIPNADH 400 NDVEHRTGDEYYQRISAFLKFCAKWNEQEPATPPNA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00032180 4 ---MSVK|PD 0.059 . ETH_00032180 12 DIAPDTR|TV 0.108 . ETH_00032180 20 VAPGNSR|RT 0.070 . ETH_00032180 21 APGNSRR|TP 0.112 . ETH_00032180 47 ALSPTGR|CA 0.146 . ETH_00032180 63 ISIMGCR|SS 0.098 . ETH_00032180 68 CRSSVVR|RL 0.120 . ETH_00032180 69 RSSVVRR|LS 0.171 . ETH_00032180 100 NAATAGR|GF 0.103 . ETH_00032180 103 TAGRGFR|GT 0.449 . ETH_00032180 114 AEQQQQR|PP 0.085 . ETH_00032180 118 QQRPPPR|EG 0.109 . ETH_00032180 132 QLLEHNR|LP 0.088 . ETH_00032180 136 HNRLPER|VQ 0.071 . ETH_00032180 143 VQVCHIR|RG 0.085 . ETH_00032180 144 QVCHIRR|GK 0.179 . ETH_00032180 146 CHIRRGK|KH 0.090 . ETH_00032180 147 HIRRGKK|HQ 0.251 . ETH_00032180 170 EHAQESK|AK 0.076 . ETH_00032180 172 AQESKAK|EY 0.068 . ETH_00032180 179 EYALTNR|FL 0.094 . ETH_00032180 201 MFGLHYR|MC 0.100 . ETH_00032180 205 HYRMCFR|CQ 0.082 . ETH_00032180 224 YGWSDGK|AT 0.069 . ETH_00032180 232 TEAALYK|DI 0.087 . ETH_00032180 243 VYSFAVK|EL 0.061 . ETH_00032180 250 ELNVPPK|NI 0.089 . ETH_00032180 270 CCDFVAK|RK 0.070 . ETH_00032180 271 CDFVAKR|KQ 0.150 . ETH_00032180 272 DFVAKRK|QK 0.096 . ETH_00032180 274 VAKRKQK|GL 0.318 . ETH_00032180 290 SIASGLR|LF 0.075 . ETH_00032180 298 FIHNIEK|AP 0.058 . ETH_00032180 310 AFQNAEK|LK 0.055 . ETH_00032180 312 QNAEKLK|KV 0.105 . ETH_00032180 313 NAEKLKK|VY 0.082 . ETH_00032180 325 MLLIHGR|LD 0.104 . ETH_00032180 328 IHGRLDR|QV 0.321 . ETH_00032180 337 PFSHSLK|LE 0.061 . ETH_00032180 343 KLEAACR|EA 0.097 . ETH_00032180 348 CREADAR|YA 0.143 . ETH_00032180 359 QESPHHR|CL 0.111 . ETH_00032180 363 HHRCLLR|AP 0.072 . ETH_00032180 370 APLLSSK|AD 0.062 . ETH_00032180 376 KADGPPK|GP 0.061 . ETH_00032180 380 PPKGPPK|RD 0.064 . ETH_00032180 381 PKGPPKR|DK 0.363 . ETH_00032180 383 GPPKRDK|EM 0.078 . ETH_00032180 387 RDKEMQK|NR 0.059 . ETH_00032180 389 KEMQKNR|VQ 0.101 . ETH_00032180 406 HNDVEHR|TG 0.090 . ETH_00032180 414 GDEYYQR|IS 0.072 . ETH_00032180 420 RISAFLK|FC 0.079 . ETH_00032180 424 FLKFCAK|WN 0.077 . ____________________________^_________________

  • Fasta :-

    >ETH_00032180 ATGTCGGTAAAGCCAGATATAGCCCCTGATACCCGGACTGTTGCCCCCGGCAACTCAAGA AGGACTCCTGCTGAGCCTTACGCCGATGGCTCAGATGACGAGGAGTTTTGTGAGATGGTG GCGCTATCACCGACAGGCCGATGCGCCACCATGTGTATCTTTGGGTGTATATCTATCATG GGCTGCCGTTCCTCCGTTGTGCGTCGTTTGTCTTTCTATCCCCCCTTCCCCGCTGGCTAT TCATTGCAAGGGGACCAGTTGTACATCCAGGAAGTGTTTAATGCGGCAACAGCAGGCCGT GGGTTCCGTGGTACTGCTGCAGCAGAGCAGCAGCAGCAGCGGCCGCCTCCTCGCGAGGGG CAAGAGAGCATACAGCAGCTCCTGGAACACAACAGGCTGCCTGAGAGGGTTCAGGTCTGC CACATCCGGCGCGGGAAGAAGCATCAGCTTGCTGCGGTGCTGCTGTGGTCGACCGCTGGA GTCCCGCCAGAACATGCGCAAGAAAGCAAGGCAAAGGAATATGCACTCACGAATCGTTTC TTGATTGTTTTTTCACATGGTAACAGTACCGATATAGGACACATGTTTGGCCTGCACTAC AGGATGTGCTTCAGATGCCAGGTAAATGTACTGGCTTACGATTACTCAGGCTACGGGTGG AGCGACGGCAAGGCGACTGAAGCTGCTCTCTACAAAGACATAAACGCAGTCTACTCGTTT GCTGTTAAGGAACTAAATGTGCCACCGAAGAACATCATTCTTTATGGGCACAGTGTTGGC TCTGGGCCGTGTTGCGACTTCGTGGCGAAGAGAAAGCAGAAGGGGCTGGGAGGAGTTATT CTTCACTCGTCAATAGCTTCGGGTCTGCGTCTCTTCATTCACAACATCGAGAAGGCTCCT TGGTTCGACGCATTCCAAAATGCAGAGAAACTGAAAAAGGTTTACGACGTGCCCATGCTG CTCATTCATGGTCGATTAGACAGACAGGTGCCGTTCTCTCATTCTTTGAAGCTAGAAGCA GCCTGCCGCGAGGCGGACGCGCGCTACGCCAACCTGCAGGAGAGTCCCCACCACCGCTGC TTACTGAGAGCGCCCCTACTTTCTTCCAAAGCAGATGGGCCCCCCAAGGGACCCCCAAAG AGAGACAAAGAGATGCAGAAAAACCGCGTGCAGACATGGTGGATACCTAACGCGGATCAC AACGATGTTGAACACAGAACAGGGGACGAATACTACCAGCGTATCTCTGCCTTTCTTAAG TTCTGCGCTAAGTGGAATGAGCAGGAGCCAGCCACACCACCAAACGCTTAG
  • Download Fasta

  • Fasta :-

    MSVKPDIAPDTRTVAPGNSRRTPAEPYADGSDDEEFCEMVALSPTGRCATMCIFGCISIM GCRSSVVRRLSFYPPFPAGYSLQGDQLYIQEVFNAATAGRGFRGTAAAEQQQQRPPPREG QESIQQLLEHNRLPERVQVCHIRRGKKHQLAAVLLWSTAGVPPEHAQESKAKEYALTNRF LIVFSHGNSTDIGHMFGLHYRMCFRCQVNVLAYDYSGYGWSDGKATEAALYKDINAVYSF AVKELNVPPKNIILYGHSVGSGPCCDFVAKRKQKGLGGVILHSSIASGLRLFIHNIEKAP WFDAFQNAEKLKKVYDVPMLLIHGRLDRQVPFSHSLKLEAACREADARYANLQESPHHRC LLRAPLLSSKADGPPKGPPKRDKEMQKNRVQTWWIPNADHNDVEHRTGDEYYQRISAFLK FCAKWNEQEPATPPNA

    No Results
No Results
No Results
IDSitePeptideScoreMethod
ETH_0003218071 SVRRLSFYPP0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India