ETH_00032550 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00032550OTHER0.9999930.0000070.000000
No Results

  • Fasta :-

    >ETH_00032550 MGAGGSTLGETILFPSPECSYDELLPGLLWISESLAAPSSGPSPARSSPAAAAAAPAAAA AAAAPIDFEVQRNRHSSSSSFPACFIPAPSGKAKYVLLYWHGNSCDLGHIREELEILGAF LECHCLAIEYPGYGLAAAATPAAAAAAAAAAAANSGRRVRASVSDTINLWGRAAFNLLLS LGVSPSNIICFGRSIGTGPAAHLAAELLAEGILVGGVVLHAPYISVHKIVAEYAAFGTWL IGDYWSNKESLSSLSPWTPLLIIHGLEDEIIPFHHGKYLFENYGATEAVKAAAFPADSSH NAYYVIDVRPGKAHEGILEHKSQGERNSSF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00032550.fa Sequence name : ETH_00032550 Sequence length : 330 VALUES OF COMPUTED PARAMETERS Coef20 : 3.255 CoefTot : -0.625 ChDiff : -10 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.541 1.959 0.225 0.707 MesoH : 0.552 0.991 -0.060 0.469 MuHd_075 : 9.831 11.635 2.978 3.113 MuHd_095 : 19.695 12.281 5.954 3.425 MuHd_100 : 15.847 9.395 5.013 2.840 MuHd_105 : 8.345 5.302 3.423 2.002 Hmax_075 : 12.300 11.200 2.110 4.770 Hmax_095 : 13.737 10.500 2.375 4.812 Hmax_100 : 12.900 8.200 2.091 4.400 Hmax_105 : 12.100 7.400 1.955 4.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9820 0.0180 DFMC : 0.9839 0.0161
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 330 ETH_00032550 MGAGGSTLGETILFPSPECSYDELLPGLLWISESLAAPSSGPSPARSSPAAAAAAPAAAAAAAAPIDFEVQRNRHSSSSS 80 FPACFIPAPSGKAKYVLLYWHGNSCDLGHIREELEILGAFLECHCLAIEYPGYGLAAAATPAAAAAAAAAAAANSGRRVR 160 ASVSDTINLWGRAAFNLLLSLGVSPSNIICFGRSIGTGPAAHLAAELLAEGILVGGVVLHAPYISVHKIVAEYAAFGTWL 240 IGDYWSNKESLSSLSPWTPLLIIHGLEDEIIPFHHGKYLFENYGATEAVKAAAFPADSSHNAYYVIDVRPGKAHEGILEH 320 KSQGERNSSF 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00032550 46 SGPSPAR|SS 0.140 . ETH_00032550 72 IDFEVQR|NR 0.086 . ETH_00032550 74 FEVQRNR|HS 0.085 . ETH_00032550 92 IPAPSGK|AK 0.081 . ETH_00032550 94 APSGKAK|YV 0.129 . ETH_00032550 111 CDLGHIR|EE 0.086 . ETH_00032550 157 AAANSGR|RV 0.166 . ETH_00032550 158 AANSGRR|VR 0.100 . ETH_00032550 160 NSGRRVR|AS 0.209 . ETH_00032550 172 TINLWGR|AA 0.128 . ETH_00032550 193 NIICFGR|SI 0.290 . ETH_00032550 228 PYISVHK|IV 0.065 . ETH_00032550 248 GDYWSNK|ES 0.060 . ETH_00032550 277 IPFHHGK|YL 0.092 . ETH_00032550 290 GATEAVK|AA 0.060 . ETH_00032550 309 YYVIDVR|PG 0.073 . ETH_00032550 312 IDVRPGK|AH 0.173 . ETH_00032550 321 EGILEHK|SQ 0.082 . ETH_00032550 326 HKSQGER|NS 0.093 . ____________________________^_________________

  • Fasta :-

    >ETH_00032550 ATGGGGGCAGGCGGCAGCACCCTCGGGGAGACAATTCTCTTCCCCTCCCCTGAATGCTCT TACGACGAGTTGCTGCCGGGTCTTCTGTGGATTTCGGAGTCTCTTGCTGCTCCCAGCAGC GGCCCGTCCCCGGCGCGGTCCTCTCCTGCTGCTGCTGCTGCTGCTCCTGCTGCTGCTGCT GCTGCTGCTGCTCCCATTGACTTCGAGGTGCAGCGAAACCGCCACAGCAGCAGCAGCAGC TTCCCCGCCTGCTTCATTCCCGCCCCCAGCGGCAAGGCCAAATATGTGCTGCTCTACTGG CACGGCAATTCCTGCGACTTGGGGCACATAAGAGAAGAGCTGGAGATTCTGGGGGCCTTT TTGGAGTGTCACTGTTTGGCTATAGAGTACCCTGGGTACGGGCTTGCTGCAGCAGCAACG CCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAACAGCGGCAGAAGAGTCCGC GCCAGCGTCAGCGACACCATCAACTTGTGGGGCCGAGCTGCTTTTAATCTTCTTCTCTCT TTGGGAGTTTCTCCCTCCAACATCATTTGCTTCGGCAGATCTATTGGCACAGGCCCTGCT GCTCACCTTGCTGCTGAGCTTTTGGCGGAGGGGATTTTGGTGGGGGGTGTGGTGCTGCAT GCGCCTTACATTTCGGTGCACAAGATAGTTGCAGAGTACGCGGCGTTTGGGACTTGGCTG ATAGGGGACTACTGGAGCAACAAGGAGTCTCTGTCGAGTTTGTCTCCGTGGACTCCCTTG TTGATAATCCACGGACTTGAAGACGAAATAATTCCTTTTCATCATGGAAAGTATCTTTTC GAAAACTACGGAGCCACCGAAGCTGTCAAGGCTGCAGCCTTTCCCGCGGACTCCTCCCAC AACGCCTACTACGTCATCGACGTCCGACCTGGGAAAGCCCATGAAGGAATTCTTGAGCAC AAAAGCCAGGGGGAGAGAAACAGCTCCTTTTGA
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  • Fasta :-

    MGAGGSTLGETILFPSPECSYDELLPGLLWISESLAAPSSGPSPARSSPAAAAAAPAAAA AAAAPIDFEVQRNRHSSSSSFPACFIPAPSGKAKYVLLYWHGNSCDLGHIREELEILGAF LECHCLAIEYPGYGLAAAATPAAAAAAAAAAAANSGRRVRASVSDTINLWGRAAFNLLLS LGVSPSNIICFGRSIGTGPAAHLAAELLAEGILVGGVVLHAPYISVHKIVAEYAAFGTWL IGDYWSNKESLSSLSPWTPLLIIHGLEDEIIPFHHGKYLFENYGATEAVKAAAFPADSSH NAYYVIDVRPGKAHEGILEHKSQGERNSSF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0003255077 SNRHSSSSSF0.99unspETH_0003255077 SNRHSSSSSF0.99unspETH_0003255077 SNRHSSSSSF0.99unspETH_00032550162 SRVRASVSDT0.998unspETH_0003255048 SPARSSPAAA0.99unspETH_0003255076 SRNRHSSSSS0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India