ETH_00033870 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00033870OTHER0.9997270.0002250.000048
No Results

  • Fasta :-

    >ETH_00033870 MVGDKQGTSDAFVSQYGVDLSFMAQQGLLPPVVGRDEEIDRIAQILSRKMTKAPMLVGEP GVGKTAVIEGLAQRIVEGAVPESLRKRRIFALDLLSLSAGSAMRGEFEKRMKEVVSYLQN NVEEVILFVDEIHTLIGAGKAAGSMDASQMLKVPLARGEIV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00033870.fa Sequence name : ETH_00033870 Sequence length : 161 VALUES OF COMPUTED PARAMETERS Coef20 : 3.183 CoefTot : -0.250 ChDiff : -2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.571 1.194 -0.015 0.496 MesoH : -0.988 0.270 -0.459 0.157 MuHd_075 : 33.046 19.268 9.792 7.573 MuHd_095 : 1.779 4.833 1.357 0.739 MuHd_100 : 2.713 2.538 1.754 0.783 MuHd_105 : 4.428 4.305 1.200 0.344 Hmax_075 : 13.737 11.813 2.614 5.154 Hmax_095 : 3.850 5.863 -1.169 2.712 Hmax_100 : 3.400 7.100 -0.954 2.620 Hmax_105 : 5.483 6.533 -0.525 3.068 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9753 0.0247 DFMC : 0.9680 0.0320
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 161 ETH_00033870 MVGDKQGTSDAFVSQYGVDLSFMAQQGLLPPVVGRDEEIDRIAQILSRKMTKAPMLVGEPGVGKTAVIEGLAQRIVEGAV 80 PESLRKRRIFALDLLSLSAGSAMRGEFEKRMKEVVSYLQNNVEEVILFVDEIHTLIGAGKAAGSMDASQMLKVPLARGEI 160 V 240 ................................................................................ 80 ................................................................................ 160 . 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00033870 5 --MVGDK|QG 0.056 . ETH_00033870 35 LPPVVGR|DE 0.124 . ETH_00033870 41 RDEEIDR|IA 0.079 . ETH_00033870 48 IAQILSR|KM 0.088 . ETH_00033870 49 AQILSRK|MT 0.078 . ETH_00033870 52 LSRKMTK|AP 0.068 . ETH_00033870 64 GEPGVGK|TA 0.066 . ETH_00033870 74 IEGLAQR|IV 0.142 . ETH_00033870 85 AVPESLR|KR 0.066 . ETH_00033870 86 VPESLRK|RR 0.068 . ETH_00033870 87 PESLRKR|RI 0.187 . ETH_00033870 88 ESLRKRR|IF 0.329 . ETH_00033870 104 SAGSAMR|GE 0.095 . ETH_00033870 109 MRGEFEK|RM 0.068 . ETH_00033870 110 RGEFEKR|MK 0.166 . ETH_00033870 112 EFEKRMK|EV 0.072 . ETH_00033870 140 TLIGAGK|AA 0.089 . ETH_00033870 152 DASQMLK|VP 0.057 . ETH_00033870 157 LKVPLAR|GE 0.096 . ____________________________^_________________

  • Fasta :-

    >ETH_00033870 ATGGTTGGAGACAAACAAGGAACTTCCGACGCCTTCGTCTCGCAGTACGGAGTGGACCTT TCCTTCATGGCGCAGCAGGGGCTGCTGCCGCCGGTGGTTGGGAGAGACGAAGAAATCGAC CGCATTGCCCAGATCTTGAGCAGGAAGATGACGAAGGCGCCCATGTTGGTGGGGGAGCCG GGCGTGGGGAAGACCGCAGTGATCGAGGGTTTGGCGCAGCGCATTGTGGAGGGGGCGGTC CCGGAATCGCTGCGGAAACGGCGGATTTTCGCGCTGGACCTGCTCTCGCTCTCCGCGGGC TCCGCCATGCGCGGAGAGTTCGAAAAAAGAATGAAAGAAGTGGTTTCTTATTTGCAAAAT AATGTCGAAGAAGTTATTCTCTTCGTCGACGAAATCCACACTCTCATTGGCGCCGGCAAG GCCGCGGGCAGCATGGACGCCAGCCAAATGCTCAAGGTCCCCCTCGCGCGCGGAGAGATC GTGTAG
  • Download Fasta

  • Fasta :-

    MVGDKQGTSDAFVSQYGVDLSFMAQQGLLPPVVGRDEEIDRIAQILSRKMTKAPMLVGEP GVGKTAVIEGLAQRIVEGAVPESLRKRRIFALDLLSLSAGSAMRGEFEKRMKEVVSYLQN NVEEVILFVDEIHTLIGAGKAAGSMDASQMLKVPLARGEIV

  • title: ATP binding site
  • coordinates: E59,P60,G61,V62,G63,K64,T65,A66,D130
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India