ETH_00037120 | Atp-dependent metalloprotease ftsh, putative (Fragment)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00037120OTHER0.9882370.0074090.004353
No Results

  • Fasta :-

    >ETH_00037120 MFVGVVDAVAGSRRIDTNGNFRQTLNQLLAELDGFKPTEGIVLICATNLLGSIDSALLRP GRVDKTIFVPLPSLKERLEMLEYYASRVQLSPEVDLTLYASLTSGLTGAEVANLLNLAAI RAASSGKKEVCGSGA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00037120.fa Sequence name : ETH_00037120 Sequence length : 135 VALUES OF COMPUTED PARAMETERS Coef20 : 3.965 CoefTot : -0.250 ChDiff : -1 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 1.724 0.236 0.566 MesoH : -0.634 0.449 -0.320 0.195 MuHd_075 : 20.050 15.001 5.285 5.526 MuHd_095 : 12.823 6.052 3.055 2.368 MuHd_100 : 20.729 12.500 4.628 4.368 MuHd_105 : 25.874 17.005 5.697 5.807 Hmax_075 : 16.683 18.900 3.472 6.230 Hmax_095 : 4.725 12.163 0.141 3.160 Hmax_100 : 13.300 12.300 2.296 4.540 Hmax_105 : 17.600 18.600 3.124 5.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9737 0.0263 DFMC : 0.9806 0.0194
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 135 ETH_00037120 MFVGVVDAVAGSRRIDTNGNFRQTLNQLLAELDGFKPTEGIVLICATNLLGSIDSALLRPGRVDKTIFVPLPSLKERLEM 80 LEYYASRVQLSPEVDLTLYASLTSGLTGAEVANLLNLAAIRAASSGKKEVCGSGA 160 ................................................................................ 80 ....................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00037120 13 DAVAGSR|RI 0.082 . ETH_00037120 14 AVAGSRR|ID 0.153 . ETH_00037120 22 DTNGNFR|QT 0.089 . ETH_00037120 36 AELDGFK|PT 0.061 . ETH_00037120 59 IDSALLR|PG 0.082 . ETH_00037120 62 ALLRPGR|VD 0.168 . ETH_00037120 65 RPGRVDK|TI 0.178 . ETH_00037120 75 VPLPSLK|ER 0.057 . ETH_00037120 77 LPSLKER|LE 0.096 . ETH_00037120 87 LEYYASR|VQ 0.072 . ETH_00037120 121 LNLAAIR|AA 0.108 . ETH_00037120 127 RAASSGK|KE 0.061 . ETH_00037120 128 AASSGKK|EV 0.184 . ____________________________^_________________

  • Fasta :-

    >ETH_00037120 ATGTTTGTGGGAGTTGTTGATGCTGTTGCTGGCAGCAGAAGAATAGACACAAATGGCAAC TTCCGACAAACCCTCAACCAGCTCCTCGCAGAGCTCGACGGCTTCAAACCCACGGAAGGC ATTGTCTTGATTTGCGCAACAAACTTGCTGGGGTCCATTGACTCCGCGCTGCTGCGGCCA GGGAGAGTGGACAAAACCATTTTTGTCCCTTTGCCTTCTCTCAAAGAAAGGCTCGAAATG CTGGAGTACTACGCCTCTCGCGTGCAGCTTTCCCCAGAAGTGGACTTGACTCTTTATGCT TCTTTAACTTCGGGACTGACTGGAGCTGAAGTTGCAAACCTTTTGAACTTGGCCGCCATT CGAGCGGCCAGCAGCGGCAAAAAAGAGGTTTGTGGCTCGGGTGCATGA
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  • Fasta :-

    MFVGVVDAVAGSRRIDTNGNFRQTLNQLLAELDGFKPTEGIVLICATNLLGSIDSALLRP GRVDKTIFVPLPSLKERLEMLEYYASRVQLSPEVDLTLYASLTSGLTGAEVANLLNLAAI RAASSGKKEVCGSGA

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0003712091 SRVQLSPEVD0.993unspETH_00037120125 SRAASSGKKE0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India