ETH_00038820 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00038820OTHER0.9998140.0001610.000024
No Results

  • Fasta :-

    >ETH_00038820 MRRRPETPPATLRLDGEGLDLRGVWVDGQEIPGGPHQGGPQGAPQGAPQGAPQGGPRYSV DEEGALYLPAAVLPAAANESFEVKTIVVINPRSNLKLSGLYLTNGLLCTQCEAEGFRRIT FFLDRPDVTSVYKVRLEADKAQYPTLLSNGDRVEGGPLEGAPHKHFAVFLDPFRKPCYLF AVVAGPLECIEDTFTTMVPKP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00038820.fa Sequence name : ETH_00038820 Sequence length : 201 VALUES OF COMPUTED PARAMETERS Coef20 : 3.490 CoefTot : 0.152 ChDiff : -4 ZoneTo : 5 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.635 1.076 0.023 0.480 MesoH : -0.606 0.312 -0.359 0.188 MuHd_075 : 24.234 9.851 4.822 5.610 MuHd_095 : 18.920 5.329 4.517 2.701 MuHd_100 : 26.225 8.554 5.733 4.397 MuHd_105 : 26.318 9.071 5.287 4.867 Hmax_075 : -2.100 0.933 -2.542 1.983 Hmax_095 : -5.700 -4.000 -3.183 0.080 Hmax_100 : -2.600 -3.000 -2.737 1.680 Hmax_105 : -2.900 -2.200 -2.447 -0.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8620 0.1380 DFMC : 0.8323 0.1677
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 201 ETH_00038820 MRRRPETPPATLRLDGEGLDLRGVWVDGQEIPGGPHQGGPQGAPQGAPQGAPQGGPRYSVDEEGALYLPAAVLPAAANES 80 FEVKTIVVINPRSNLKLSGLYLTNGLLCTQCEAEGFRRITFFLDRPDVTSVYKVRLEADKAQYPTLLSNGDRVEGGPLEG 160 APHKHFAVFLDPFRKPCYLFAVVAGPLECIEDTFTTMVPKP 240 ................................................................................ 80 ................................................................................ 160 ......................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00038820 2 -----MR|RR 0.073 . ETH_00038820 3 ----MRR|RP 0.118 . ETH_00038820 4 ---MRRR|PE 0.104 . ETH_00038820 13 TPPATLR|LD 0.114 . ETH_00038820 22 GEGLDLR|GV 0.102 . ETH_00038820 57 APQGGPR|YS 0.131 . ETH_00038820 84 NESFEVK|TI 0.073 . ETH_00038820 92 IVVINPR|SN 0.090 . ETH_00038820 96 NPRSNLK|LS 0.067 . ETH_00038820 117 CEAEGFR|RI 0.079 . ETH_00038820 118 EAEGFRR|IT 0.104 . ETH_00038820 125 ITFFLDR|PD 0.073 . ETH_00038820 133 DVTSVYK|VR 0.054 . ETH_00038820 135 TSVYKVR|LE 0.095 . ETH_00038820 140 VRLEADK|AQ 0.063 . ETH_00038820 152 LLSNGDR|VE 0.104 . ETH_00038820 164 LEGAPHK|HF 0.068 . ETH_00038820 174 VFLDPFR|KP 0.064 . ETH_00038820 175 FLDPFRK|PC 0.065 . ETH_00038820 200 FTTMVPK|P- 0.065 . ____________________________^_________________

  • Fasta :-

    >ETH_00038820 ATGCGGCGAAGACCCGAAACCCCTCCCGCAACGCTGCGGCTCGACGGCGAGGGTTTAGAC CTTCGAGGGGTTTGGGTAGATGGCCAAGAAATCCCGGGGGGCCCCCACCAGGGGGGCCCC CAGGGGGCCCCCCAGGGGGCCCCCCAGGGGGCCCCCCAGGGGGGCCCCCGGTACAGCGTG GACGAAGAGGGGGCCCTGTACCTTCCTGCTGCAGTGCTGCCAGCAGCAGCGAACGAAAGC TTCGAAGTGAAAACCATTGTGGTTATAAACCCTCGCAGCAACTTGAAACTCTCGGGACTT TACTTGACCAATGGTCTACTTTGCACGCAGTGCGAAGCAGAAGGGTTTAGGAGAATAACC TTTTTCCTGGACAGGCCCGACGTGACCTCAGTCTACAAGGTGCGACTGGAGGCGGACAAG GCCCAGTACCCTACTTTGCTCAGCAACGGGGACCGCGTGGAGGGGGGCCCCCTCGAGGGG GCCCCCCATAAACACTTTGCTGTTTTTTTGGACCCTTTTAGGAAACCCTGTTACCTTTTT GCTGTTGTTGCGGGCCCCCTCGAGTGCATTGAAGACACCTTCACCACCATGGTCCCCAAA CCCTAA
  • Download Fasta

  • Fasta :-

    MRRRPETPPATLRLDGEGLDLRGVWVDGQEIPGGPHQGGPQGAPQGAPQGAPQGGPRYSV DEEGALYLPAAVLPAAANESFEVKTIVVINPRSNLKLSGLYLTNGLLCTQCEAEGFRRIT FFLDRPDVTSVYKVRLEADKAQYPTLLSNGDRVEGGPLEGAPHKHFAVFLDPFRKPCYLF AVVAGPLECIEDTFTTMVPKP

    No Results
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IDSitePeptideScoreMethod
ETH_0003882059 SGPRYSVDEE0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India