ETH_00040925 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00040925OTHER0.9999650.0000340.000001
No Results

  • Fasta :-

    >ETH_00040925 MQKTEDGIFLLQLLQQGELQQEQLQDILQQQHDVRQQELQQQQRAHPQQQQQQEQQQQQQ QQESVQHTWDAAARAALLMEGKHYEQFLLLSPSQLTATGLKELCLGYTPAAAAATAAAAA TAAPTVALPLYVPCVLFRNNHFSVIVRQPLPSCQQKLLQQLEQQQQQEDVLQEQQQQQQQ ECAIYCLCTDAAFSDEPQIVWEILIDVKGDNLFCNDKFLPLQYTQEGESSSCSSAASLGG ALQQEQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00040925.fa Sequence name : ETH_00040925 Sequence length : 246 VALUES OF COMPUTED PARAMETERS Coef20 : 3.135 CoefTot : -0.268 ChDiff : -17 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.635 1.600 0.304 0.616 MesoH : 0.367 0.736 -0.112 0.345 MuHd_075 : 12.436 13.681 4.314 3.469 MuHd_095 : 11.139 2.150 1.611 1.336 MuHd_100 : 7.934 7.187 3.004 1.737 MuHd_105 : 21.810 15.865 7.365 4.672 Hmax_075 : 6.300 12.483 0.139 4.678 Hmax_095 : -1.800 2.887 -3.284 2.179 Hmax_100 : -0.800 4.000 -1.962 2.440 Hmax_105 : 6.100 9.400 -0.012 3.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9603 0.0397 DFMC : 0.9547 0.0453
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 246 ETH_00040925 MQKTEDGIFLLQLLQQGELQQEQLQDILQQQHDVRQQELQQQQRAHPQQQQQQEQQQQQQQQESVQHTWDAAARAALLME 80 GKHYEQFLLLSPSQLTATGLKELCLGYTPAAAAATAAAAATAAPTVALPLYVPCVLFRNNHFSVIVRQPLPSCQQKLLQQ 160 LEQQQQQEDVLQEQQQQQQQECAIYCLCTDAAFSDEPQIVWEILIDVKGDNLFCNDKFLPLQYTQEGESSSCSSAASLGG 240 ALQQEQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00040925 3 ----MQK|TE 0.062 . ETH_00040925 35 QQQHDVR|QQ 0.108 . ETH_00040925 44 ELQQQQR|AH 0.111 . ETH_00040925 74 TWDAAAR|AA 0.108 . ETH_00040925 82 ALLMEGK|HY 0.068 . ETH_00040925 101 LTATGLK|EL 0.058 . ETH_00040925 138 VPCVLFR|NN 0.095 . ETH_00040925 147 HFSVIVR|QP 0.092 . ETH_00040925 156 LPSCQQK|LL 0.096 . ETH_00040925 208 EILIDVK|GD 0.053 . ETH_00040925 217 NLFCNDK|FL 0.063 . ____________________________^_________________

  • Fasta :-

    >ETH_00040925 ATGCAGAAAACTGAGGACGGAATCTTCCTGCTGCAGCTGCTGCAGCAGGGCGAGCTGCAG CAGGAGCAGCTGCAGGACATTCTGCAGCAGCAGCACGACGTGAGGCAGCAGGAGCTGCAG CAGCAACAGCGAGCGCACCCCCAGCAGCAGCAGCAGCAAGAGCAGCAGCAGCAGCAGCAG CAGCAGGAAAGCGTGCAGCACACCTGGGATGCAGCAGCAAGAGCTGCGCTGCTGATGGAA GGCAAACACTACGAGCAGTTTTTGCTGCTGTCTCCTTCCCAGCTGACAGCAACGGGGCTA AAGGAGCTGTGTCTGGGCTACACGCCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCA ACAGCAGCACCAACTGTTGCGCTGCCCCTGTATGTCCCCTGCGTCCTCTTCCGCAACAAT CACTTCTCGGTGATTGTGCGGCAGCCGCTGCCTAGCTGCCAGCAGAAGCTGCTGCAGCAG CTGGAGCAGCAGCAGCAGCAGGAAGACGTGCTGCAGGAGCAGCAGCAGCAGCAGCAGCAG GAGTGCGCCATTTACTGCCTCTGCACAGATGCTGCCTTTTCTGATGAGCCCCAAATCGTT TGGGAAATTCTTATTGATGTAAAAGGAGATAATTTATTTTGTAATGACAAATTTCTGCCT CTGCAATACACCCAAGAAGGGGAGAGCAGCAGCTGCTCTAGTGCTGCTTCACTCGGCGGT GCGCTGCAGCAGGAGCAA
  • Download Fasta

  • Fasta :-

    MQKTEDGIFLLQLLQQGELQQEQLQDILQQQHDVRQQELQQQQRAHPQQQQQQEQQQQQQ QQESVQHTWDAAARAALLMEGKHYEQFLLLSPSQLTATGLKELCLGYTPAAAAATAAAAA TAAPTVALPLYVPCVLFRNNHFSVIVRQPLPSCQQKLLQQLEQQQQQEDVLQEQQQQQQQ ECAIYCLCTDAAFSDEPQIVWEILIDVKGDNLFCNDKFLPLQYTQEGESSSCSSAASLGG ALQQEQ

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IDSitePeptideScoreMethod
ETH_00040925194 SDAAFSDEPQ0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India