ETH_00042575 | Lon protease homolog, mitochondrial , related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00042575OTHER0.9998090.0001650.000026
No Results

  • Fasta :-

    >ETH_00042575 MNPLIVLDEIDKLGRDFRGDPASALLEVLDPSQNNLFRDHYVDAPVDLSRVLFVCTANAQ DAIPGPLLDRMELIRIAGYIHEEKVSIAKQYLIPKTAEATGLNDSRVSIEPSALNVIVRD YAREAGVRSLSKCIEKLFRRAALAIVR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00042575.fa Sequence name : ETH_00042575 Sequence length : 147 VALUES OF COMPUTED PARAMETERS Coef20 : 3.274 CoefTot : -0.143 ChDiff : -2 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.488 1.024 -0.014 0.429 MesoH : -1.149 0.222 -0.469 0.138 MuHd_075 : 12.022 10.120 5.354 2.162 MuHd_095 : 30.556 15.913 6.971 6.623 MuHd_100 : 37.236 17.723 9.336 7.714 MuHd_105 : 47.425 23.974 12.185 9.775 Hmax_075 : 1.050 11.900 0.245 2.940 Hmax_095 : 4.988 12.862 -0.487 4.655 Hmax_100 : 15.800 17.100 3.074 6.500 Hmax_105 : 17.267 20.417 3.400 7.023 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8259 0.1741 DFMC : 0.8828 0.1172
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 147 ETH_00042575 MNPLIVLDEIDKLGRDFRGDPASALLEVLDPSQNNLFRDHYVDAPVDLSRVLFVCTANAQDAIPGPLLDRMELIRIAGYI 80 HEEKVSIAKQYLIPKTAEATGLNDSRVSIEPSALNVIVRDYAREAGVRSLSKCIEKLFRRAALAIVR 160 ................................................................................ 80 ................................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00042575 12 VLDEIDK|LG 0.055 . ETH_00042575 15 EIDKLGR|DF 0.089 . ETH_00042575 18 KLGRDFR|GD 0.281 . ETH_00042575 38 SQNNLFR|DH 0.108 . ETH_00042575 50 APVDLSR|VL 0.085 . ETH_00042575 70 PGPLLDR|ME 0.066 . ETH_00042575 75 DRMELIR|IA 0.124 . ETH_00042575 84 GYIHEEK|VS 0.060 . ETH_00042575 89 EKVSIAK|QY 0.058 . ETH_00042575 95 KQYLIPK|TA 0.072 . ETH_00042575 106 TGLNDSR|VS 0.064 . ETH_00042575 119 ALNVIVR|DY 0.118 . ETH_00042575 123 IVRDYAR|EA 0.111 . ETH_00042575 128 AREAGVR|SL 0.152 . ETH_00042575 132 GVRSLSK|CI 0.074 . ETH_00042575 136 LSKCIEK|LF 0.060 . ETH_00042575 139 CIEKLFR|RA 0.081 . ETH_00042575 140 IEKLFRR|AA 0.171 . ETH_00042575 147 AALAIVR|-- 0.077 . ____________________________^_________________

  • Fasta :-

    >ETH_00042575 ATGAATCCTTTGATAGTTTTGGACGAGATTGACAAACTCGGGAGGGACTTTCGAGGAGAC CCCGCCTCTGCACTTCTCGAAGTTTTAGACCCTTCGCAAAACAATTTATTTCGAGACCAT TATGTCGACGCCCCTGTGGACTTGTCGAGGGTTTTGTTTGTTTGCACTGCCAACGCCCAA GACGCCATTCCAGGGCCGCTGCTGGACCGCATGGAGCTAATTCGGATTGCTGGATATATC CACGAAGAAAAAGTCTCAATTGCAAAGCAGTATTTGATTCCCAAGACGGCAGAGGCTACA GGCTTGAACGACTCGAGGGTTTCCATTGAGCCCTCAGCCCTCAATGTTATTGTCCGGGAC TACGCGAGAGAGGCGGGGGTTAGATCTTTATCGAAGTGCATAGAAAAGCTTTTCAGAAGA GCGGCCCTCGCCATCGTCCGGTAA
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  • Fasta :-

    MNPLIVLDEIDKLGRDFRGDPASALLEVLDPSQNNLFRDHYVDAPVDLSRVLFVCTANAQ DAIPGPLLDRMELIRIAGYIHEEKVSIAKQYLIPKTAEATGLNDSRVSIEPSALNVIVRD YAREAGVRSLSKCIEKLFRRAALAIVR

    No Results
No Results
No Results
IDSitePeptideScoreMethod
ETH_00042575108 SDSRVSIEPS0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India