ETH_00043935 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008237      GO:0008270      

  • Computed_GO_Functions:  metallopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00043935OTHER0.9893430.0006820.009975
No Results

  • Fasta :-

    >ETH_00043935 MRGSWEWDWFQLTLKEGLTVFRDQLFSAAMGSAAVKRIEDVNFLRAHQFPEDAGPMSHPI RPEAYIAMDNFYTLTVYEKGAEVVRMYHTLLGPEGFRKGMDLYFKRHDGQAVTCDDFRKA MADANNKDFTQFERWYSQAGTPEVEVLEQRYDASSKKFFLRLRQKTPPTPGQPTKLPLVI PVKTGLIGKVSKKDLLDPPTQLP
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00043935.fa Sequence name : ETH_00043935 Sequence length : 203 VALUES OF COMPUTED PARAMETERS Coef20 : 3.871 CoefTot : -0.003 ChDiff : 2 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.259 0.935 -0.171 0.353 MesoH : -1.135 -0.070 -0.563 0.105 MuHd_075 : 31.157 14.655 8.576 5.416 MuHd_095 : 7.074 6.262 2.675 1.727 MuHd_100 : 18.882 9.898 5.711 3.440 MuHd_105 : 28.275 11.862 7.514 4.768 Hmax_075 : 15.983 9.100 -0.229 5.647 Hmax_095 : -0.700 1.700 -2.871 2.340 Hmax_100 : 9.100 5.200 -0.696 4.430 Hmax_105 : 13.533 4.900 0.481 4.690 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9291 0.0709 DFMC : 0.9062 0.0938
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 203 ETH_00043935 MRGSWEWDWFQLTLKEGLTVFRDQLFSAAMGSAAVKRIEDVNFLRAHQFPEDAGPMSHPIRPEAYIAMDNFYTLTVYEKG 80 AEVVRMYHTLLGPEGFRKGMDLYFKRHDGQAVTCDDFRKAMADANNKDFTQFERWYSQAGTPEVEVLEQRYDASSKKFFL 160 RLRQKTPPTPGQPTKLPLVIPVKTGLIGKVSKKDLLDPPTQLP 240 ................................................................................ 80 ................................................................................ 160 ........................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00043935 2 -----MR|GS 0.097 . ETH_00043935 15 WFQLTLK|EG 0.059 . ETH_00043935 22 EGLTVFR|DQ 0.082 . ETH_00043935 36 MGSAAVK|RI 0.080 . ETH_00043935 37 GSAAVKR|IE 0.231 . ETH_00043935 45 EDVNFLR|AH 0.079 . ETH_00043935 61 PMSHPIR|PE 0.102 . ETH_00043935 79 TLTVYEK|GA 0.085 . ETH_00043935 85 KGAEVVR|MY 0.108 . ETH_00043935 97 LGPEGFR|KG 0.064 . ETH_00043935 98 GPEGFRK|GM 0.096 . ETH_00043935 105 GMDLYFK|RH 0.058 . ETH_00043935 106 MDLYFKR|HD 0.254 . ETH_00043935 118 VTCDDFR|KA 0.084 . ETH_00043935 119 TCDDFRK|AM 0.085 . ETH_00043935 127 MADANNK|DF 0.073 . ETH_00043935 134 DFTQFER|WY 0.105 . ETH_00043935 150 VEVLEQR|YD 0.076 . ETH_00043935 156 RYDASSK|KF 0.062 . ETH_00043935 157 YDASSKK|FF 0.099 . ETH_00043935 161 SKKFFLR|LR 0.109 . ETH_00043935 163 KFFLRLR|QK 0.081 . ETH_00043935 165 FLRLRQK|TP 0.056 . ETH_00043935 175 TPGQPTK|LP 0.067 . ETH_00043935 183 PLVIPVK|TG 0.057 . ETH_00043935 189 KTGLIGK|VS 0.058 . ETH_00043935 192 LIGKVSK|KD 0.059 . ETH_00043935 193 IGKVSKK|DL 0.134 . ____________________________^_________________

  • Fasta :-

    >ETH_00043935 ATGAGAGGATCCTGGGAGTGGGACTGGTTCCAGTTGACTCTCAAAGAGGGTTTGACTGTG TTTAGAGACCAACTCTTTTCTGCTGCAATGGGCTCTGCTGCTGTCAAAAGAATCGAAGAT GTCAACTTCTTGAGGGCCCACCAGTTCCCCGAAGATGCGGGCCCCATGAGTCACCCCATA AGGCCCGAGGCCTACATAGCAATGGACAACTTCTACACACTCACAGTCTACGAAAAGGGC GCGGAAGTCGTCCGCATGTACCACACGCTGCTGGGCCCCGAGGGTTTCCGAAAAGGAATG GATTTATATTTCAAAAGACATGATGGACAAGCAGTGACTTGTGATGATTTTAGAAAAGCA ATGGCGGATGCAAACAACAAAGACTTCACCCAGTTCGAGCGCTGGTACTCCCAGGCGGGA ACCCCTGAAGTGGAGGTTTTGGAGCAGCGCTACGACGCCAGCAGCAAAAAGTTCTTTTTG CGGCTGCGACAAAAAACCCCTCCAACTCCAGGACAGCCAACGAAGTTGCCTTTAGTCATT CCAGTCAAAACTGGACTTATTGGAAAAGTTTCCAAAAAGGACCTTCTAGACCCCCCAACC CAGCTCCCGTGA
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  • Fasta :-

    MRGSWEWDWFQLTLKEGLTVFRDQLFSAAMGSAAVKRIEDVNFLRAHQFPEDAGPMSHPI RPEAYIAMDNFYTLTVYEKGAEVVRMYHTLLGPEGFRKGMDLYFKRHDGQAVTCDDFRKA MADANNKDFTQFERWYSQAGTPEVEVLEQRYDASSKKFFLRLRQKTPPTPGQPTKLPLVI PVKTGLIGKVSKKDLLDPPTQLP

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00043935155 SYDASSKKFF0.993unspETH_00043935191 SIGKVSKKDL0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India