LdBPK_010630.1 | DNA-damage inducible protein DDI1-like protein

_IDPredictionOTHERSPmTPCS_Position
LdBPK_010630.1OTHER0.9999180.0000060.000076
No Results

  • Fasta :-

    >LdBPK_010630.1 MDERQLELQRRIYAQIQQQQIDENLANALEYTPEAFAKVAMLYVPCTINQVLVKAFVDSG AQNSIMNKRTAERCGLMRLVDVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIE DQAMDLIIGLDQLRRHQMMIDLKHNCLTIDNINVPFLPENDPPALTALDDDENAMHAPRH QDPAATAIPASIPAAPVLSEGERQARIEGFMTFSGITDPTQAAELLEAADWDPNVAAALL FDT
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/LdBPK_010630.1.fa Sequence name : LdBPK_010630 Sequence length : 243 VALUES OF COMPUTED PARAMETERS Coef20 : 3.629 CoefTot : 0.000 ChDiff : -14 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.418 1.376 0.163 0.635 MesoH : -0.760 0.425 -0.358 0.205 MuHd_075 : 2.418 10.271 1.684 4.020 MuHd_095 : 34.801 18.508 8.308 6.619 MuHd_100 : 33.729 18.092 8.054 7.253 MuHd_105 : 27.732 14.670 6.667 6.873 Hmax_075 : -14.817 -0.263 -5.781 0.670 Hmax_095 : -0.525 3.200 -2.736 1.969 Hmax_100 : 0.100 4.200 -2.741 1.990 Hmax_105 : -5.833 5.250 -2.261 2.812 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8339 0.1661 DFMC : 0.9006 0.0994
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 243 LdBPK_010630.1 MDERQLELQRRIYAQIQQQQIDENLANALEYTPEAFAKVAMLYVPCTINQVLVKAFVDSGAQNSIMNKRTAERCGLMRLV 80 DVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIEDQAMDLIIGLDQLRRHQMMIDLKHNCLTIDNINVPFLPEN 160 DPPALTALDDDENAMHAPRHQDPAATAIPASIPAAPVLSEGERQARIEGFMTFSGITDPTQAAELLEAADWDPNVAAALL 240 FDT 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ LdBPK_010630.1 4 ---MDER|QL 0.091 . LdBPK_010630.1 10 RQLELQR|RI 0.088 . LdBPK_010630.1 11 QLELQRR|IY 0.185 . LdBPK_010630.1 38 TPEAFAK|VA 0.092 . LdBPK_010630.1 54 INQVLVK|AF 0.078 . LdBPK_010630.1 68 QNSIMNK|RT 0.062 . LdBPK_010630.1 69 NSIMNKR|TA 0.273 . LdBPK_010630.1 73 NKRTAER|CG 0.080 . LdBPK_010630.1 78 ERCGLMR|LV 0.129 . LdBPK_010630.1 83 MRLVDVR|MR 0.109 . LdBPK_010630.1 85 LVDVRMR|GV 0.123 . LdBPK_010630.1 93 VAVGVGR|QE 0.095 . LdBPK_010630.1 99 RQEICGR|IH 0.083 . LdBPK_010630.1 134 IGLDQLR|RH 0.066 . LdBPK_010630.1 135 GLDQLRR|HQ 0.110 . LdBPK_010630.1 143 QMMIDLK|HN 0.061 . LdBPK_010630.1 179 NAMHAPR|HQ 0.119 . LdBPK_010630.1 203 VLSEGER|QA 0.127 . LdBPK_010630.1 206 EGERQAR|IE 0.245 . ____________________________^_________________

  • Fasta :-

    >LdBPK_010630.1 ATGGACGAGCGCCAGCTAGAGCTGCAGCGCCGCATCTACGCTCAAATCCAGCAGCAGCAG ATAGACGAGAATCTGGCCAACGCGCTCGAGTACACGCCAGAGGCGTTCGCGAAGGTAGCG ATGCTCTACGTGCCGTGCACCATCAACCAGGTGCTAGTGAAAGCCTTCGTCGACTCCGGC GCGCAGAACAGCATCATGAACAAGCGCACGGCGGAGCGGTGTGGGTTGATGCGGCTCGTC GACGTCCGCATGCGTGGCGTCGCCGTCGGAGTAGGGCGGCAGGAGATCTGCGGTCGCATT CACATGACCCCTGTGAACCTCGCAGGCATGTACATCCCCTTCGCCTTCTACGTGATCGAG GACCAGGCAATGGACTTGATCATCGGTCTCGACCAGCTGAGGCGCCATCAGATGATGATA GACCTCAAGCATAACTGTCTCACCATCGACAACATCAACGTCCCGTTCTTGCCGGAGAAC GATCCGCCTGCGTTGACGGCGCTGGACGACGACGAGAATGCTATGCACGCGCCGCGTCAC CAGGACCCGGCAGCGACAGCCATCCCTGCTTCCATCCCTGCTGCACCGGTGCTCTCGGAG GGCGAGCGGCAGGCTCGGATTGAAGGTTTCATGACGTTCTCGGGTATAACTGACCCCACG CAGGCGGCGGAATTGCTGGAGGCCGCCGACTGGGACCCCAACGTGGCGGCGGCGCTCCTC TTCGACACGTGA
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  • Fasta :-

    MDERQLELQRRIYAQIQQQQIDENLANALEYTPEAFAKVAMLYVPCTINQVLVKAFVDSG AQNSIMNKRTAERCGLMRLVDVRMRGVAVGVGRQEICGRIHMTPVNLAGMYIPFAFYVIE DQAMDLIIGLDQLRRHQMMIDLKHNCLTIDNINVPFLPENDPPALTALDDDENAMHAPRH QDPAATAIPASIPAAPVLSEGERQARIEGFMTFSGITDPTQAAELLEAADWDPNVAAALL FDT

  • title: catalytic motif
  • coordinates: D58,S59,G60
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India